RNA–Protein interactions for RNA: ENST00000520828.5

PTK2-223, Transcript of protein tyrosine kinase 2, human

TSL 4

Gene PTK2, Length 574 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTK2-223	ENST00000520828	COQ8A	Q8NI60	647 aa		5.66	□□□□□ -1.5
PTK2-223	ENST00000520828	RNASEH2C	Q8TDP1	164 aa	Known RBP	5.66	□□□□□ -1.5
PTK2-223	ENST00000520828	CCDC32	Q9BV29	185 aa		5.66	□□□□□ -1.5
PTK2-223	ENST00000520828	CACFD1	Q9UGQ2	172 aa		5.66	□□□□□ -1.5
PTK2-223	ENST00000520828	GOLT1B	Q9Y3E0	138 aa		5.66	□□□□□ -1.5
PTK2-223	ENST00000520828	YTHDF2	Q9Y5A9	579 aa	Known RBP	5.66	□□□□□ -1.5
PTK2-223	ENST00000520828	TRAV6	A0A075B6T7	132 aa		5.65	□□□□□ -1.5
PTK2-223	ENST00000520828	PIGBOS1	A0A0B4J2F0	54 aa		5.65	□□□□□ -1.5
PTK2-223	ENST00000520828	LOC102723971	A0A1B0GUV8	181 aa		5.65	□□□□□ -1.5
PTK2-223	ENST00000520828		H3BP45	60 aa		5.65	□□□□□ -1.5
PTK2-223	ENST00000520828	HBE1	P02100	147 aa		5.65	□□□□□ -1.5
PTK2-223	ENST00000520828	SLC25A6	P12236	298 aa		5.65	□□□□□ -1.5
PTK2-223	ENST00000520828	HLA-DRB4	P13762	266 aa		5.65	□□□□□ -1.5
PTK2-223	ENST00000520828	AP2S1	P53680	142 aa	Predicted RBP	5.65	□□□□□ -1.5
PTK2-223	ENST00000520828	XG	P55808	180 aa		5.65	□□□□□ -1.5
PTK2-223	ENST00000520828	ETFRF1	Q6IPR1	90 aa		5.65	□□□□□ -1.5
PTK2-223	ENST00000520828	NOXA1	Q86UR1	476 aa		5.65	□□□□□ -1.5
PTK2-223	ENST00000520828	OR1S2	Q8NGQ3	325 aa		5.65	□□□□□ -1.5
PTK2-223	ENST00000520828	NPIPB3	Q92617	1050 aa		5.65	□□□□□ -1.5
PTK2-223	ENST00000520828	SEC22C	Q9BRL7	303 aa		5.65	□□□□□ -1.5
PTK2-223	ENST00000520828	MRPL18	Q9H0U6	180 aa	Known RBP	5.65	□□□□□ -1.5
PTK2-223	ENST00000520828	NUDT15	Q9NV35	164 aa		5.65	□□□□□ -1.5
PTK2-223	ENST00000520828	LINC00588	Q9Y4M8	146 aa		5.65	□□□□□ -1.5
PTK2-223	ENST00000520828		U3KQ87	197 aa		5.65	□□□□□ -1.5
PTK2-223	ENST00000520828	HLA-DRB4	X5D2U9	266 aa		5.65	□□□□□ -1.5
PTK2-223	ENST00000520828	FAM90A26	D6RGX4	464 aa		5.64	□□□□□ -1.51
PTK2-223	ENST00000520828	WRB	O00258	174 aa		5.64	□□□□□ -1.51
PTK2-223	ENST00000520828	CCS	O14618	274 aa		5.64	□□□□□ -1.51
PTK2-223	ENST00000520828	SYNGR2	O43760	224 aa		5.64	□□□□□ -1.51
PTK2-223	ENST00000520828	SSSCA1	O60232	199 aa		5.64	□□□□□ -1.51
PTK2-223	ENST00000520828	MED6	O75586	246 aa		5.64	□□□□□ -1.51
PTK2-223	ENST00000520828	SCGB1D2	O95969	90 aa		5.64	□□□□□ -1.51
PTK2-223	ENST00000520828	IGKV3-20	P01619	116 aa		5.64	□□□□□ -1.51
PTK2-223	ENST00000520828	TCRB	P04435	133 aa		5.64	□□□□□ -1.51
PTK2-223	ENST00000520828	FXYD7	P58549	80 aa		5.64	□□□□□ -1.51
PTK2-223	ENST00000520828	DLK1	P80370	383 aa		5.64	□□□□□ -1.51
PTK2-223	ENST00000520828	CLINT1	Q14677	625 aa		5.64	□□□□□ -1.51
PTK2-223	ENST00000520828	ZNF846	Q147U1	533 aa		5.64	□□□□□ -1.51
PTK2-223	ENST00000520828	S100Z	Q8WXG8	99 aa		5.64	□□□□□ -1.51
PTK2-223	ENST00000520828	SLC35E1	Q96K37	410 aa		5.64	□□□□□ -1.51
PTK2-223	ENST00000520828		Q9H8V8	135 aa		5.64	□□□□□ -1.51
PTK2-223	ENST00000520828	SEPSECS	Q9HD40	501 aa	Known RBP	5.64	□□□□□ -1.51
PTK2-223	ENST00000520828	MDFIC	Q9P1T7	246 aa		5.64	□□□□□ -1.51
PTK2-223	ENST00000520828	HMCN2	Q8NDA2	5059 aa		5.64	□□□□□ -1.51
PTK2-223	ENST00000520828	TRAV30	A0A087WSZ9	112 aa		5.63	□□□□□ -1.51
PTK2-223	ENST00000520828	FAM240B	A0A1B0GVZ2	78 aa		5.63	□□□□□ -1.51
PTK2-223	ENST00000520828	ZFP92	A6NM28	416 aa		5.63	□□□□□ -1.51
PTK2-223	ENST00000520828	FAM25E	A8MYX2	175 aa		5.63	□□□□□ -1.51
PTK2-223	ENST00000520828		F5H768	121 aa		5.63	□□□□□ -1.51
PTK2-223	ENST00000520828	IL4	P05112	153 aa		5.63	□□□□□ -1.51
PTK2-223	ENST00000520828	YPEL3	P61236	119 aa	Predicted RBP	5.63	□□□□□ -1.51
PTK2-223	ENST00000520828	POLR2G	P62487	172 aa	Known RBP eCLIP	5.63	□□□□□ -1.51
PTK2-223	ENST00000520828	ASAH1	Q13510	395 aa		5.63	□□□□□ -1.51
PTK2-223	ENST00000520828	GAMT	Q14353	236 aa		5.63	□□□□□ -1.51
PTK2-223	ENST00000520828	USF2	Q15853	346 aa	Predicted RBP	5.63	□□□□□ -1.51
PTK2-223	ENST00000520828	RRN3P1	Q2M238	152 aa		5.63	□□□□□ -1.51
PTK2-223	ENST00000520828	IAH1	Q2TAA2	248 aa	Predicted RBP	5.63	□□□□□ -1.51
PTK2-223	ENST00000520828	SPANXN5	Q5MJ07	72 aa		5.63	□□□□□ -1.51
PTK2-223	ENST00000520828	SSX7	Q7RTT5	188 aa		5.63	□□□□□ -1.51
PTK2-223	ENST00000520828	OR4D5	Q8NGN0	318 aa		5.63	□□□□□ -1.51
PTK2-223	ENST00000520828	CIB3	Q96Q77	187 aa	Predicted RBP	5.63	□□□□□ -1.51
PTK2-223	ENST00000520828	WDR12	Q9GZL7	423 aa	Known RBP	5.63	□□□□□ -1.51
PTK2-223	ENST00000520828		Q9H3A6	140 aa		5.63	□□□□□ -1.51
PTK2-223	ENST00000520828	GSKIP	Q9P0R6	139 aa		5.63	□□□□□ -1.51
PTK2-223	ENST00000520828	FLG2	Q5D862	2391 aa	Predicted RBP	5.62	□□□□□ -1.51
PTK2-223	ENST00000520828	IGKV1D-37	A0A075B6S9	117 aa		5.62	□□□□□ -1.51
PTK2-223	ENST00000520828		A0A1W2PPQ1	181 aa		5.62	□□□□□ -1.51
PTK2-223	ENST00000520828	EREG	O14944	169 aa		5.62	□□□□□ -1.51
PTK2-223	ENST00000520828	UPK1B	O75841	260 aa		5.62	□□□□□ -1.51
PTK2-223	ENST00000520828	TOMM40	O96008	361 aa		5.62	□□□□□ -1.51
PTK2-223	ENST00000520828	SMR3B	P02814	79 aa	Predicted RBP	5.62	□□□□□ -1.51
PTK2-223	ENST00000520828	HNRNPC	P07910	306 aa	Known RBP eCLIP	5.62	□□□□□ -1.51	7e-7	■□□□□ 9.8
PTK2-223	ENST00000520828	RD3L	P0DJH9	198 aa		5.62	□□□□□ -1.51
PTK2-223	ENST00000520828	NKX2-1	P43699	371 aa	Predicted RBP	5.62	□□□□□ -1.51
PTK2-223	ENST00000520828	RAB11A	P62491	216 aa		5.62	□□□□□ -1.51
PTK2-223	ENST00000520828	ZNF90	Q03938	601 aa		5.62	□□□□□ -1.51
PTK2-223	ENST00000520828	AKR1C1	Q04828	323 aa		5.62	□□□□□ -1.51
PTK2-223	ENST00000520828	OR2F1	Q13607	317 aa		5.62	□□□□□ -1.51
PTK2-223	ENST00000520828	CDPF1	Q6NVV7	123 aa		5.62	□□□□□ -1.51
PTK2-223	ENST00000520828	MZT2B	Q6NZ67	158 aa		5.62	□□□□□ -1.51
PTK2-223	ENST00000520828	C16orf54	Q6UWD8	224 aa		5.62	□□□□□ -1.51
PTK2-223	ENST00000520828		Q6ZSN1	163 aa		5.62	□□□□□ -1.51
PTK2-223	ENST00000520828	ACOT7L	Q6ZUV0	252 aa		5.62	□□□□□ -1.51
PTK2-223	ENST00000520828	ZBTB8B	Q8NAP8	495 aa	Predicted RBP	5.62	□□□□□ -1.51
PTK2-223	ENST00000520828	OR51G1	Q8NGK1	321 aa		5.62	□□□□□ -1.51
PTK2-223	ENST00000520828	ENKUR	Q8TC29	256 aa		5.62	□□□□□ -1.51
PTK2-223	ENST00000520828	ZNF431	Q8TF32	576 aa	Predicted RBP	5.62	□□□□□ -1.51
PTK2-223	ENST00000520828		Q8WTZ3	238 aa		5.62	□□□□□ -1.51
PTK2-223	ENST00000520828	MITD1	Q8WV92	249 aa		5.62	□□□□□ -1.51
PTK2-223	ENST00000520828	GLMP	Q8WWB7	406 aa		5.62	□□□□□ -1.51
PTK2-223	ENST00000520828	C17orf77	Q96MU5	243 aa		5.62	□□□□□ -1.51
PTK2-223	ENST00000520828	TMEM208	Q9BTX3	173 aa		5.62	□□□□□ -1.51
PTK2-223	ENST00000520828	PBDC1	Q9BVG4	233 aa		5.62	□□□□□ -1.51
PTK2-223	ENST00000520828	KRTAP9-9	Q9BYP9	154 aa		5.62	□□□□□ -1.51
PTK2-223	ENST00000520828	KRTAP9-4	Q9BYQ2	154 aa		5.62	□□□□□ -1.51
PTK2-223	ENST00000520828	KRTAP1-5	Q9BYS1	174 aa		5.62	□□□□□ -1.51
PTK2-223	ENST00000520828	NRN1	Q9NPD7	142 aa		5.62	□□□□□ -1.51
PTK2-223	ENST00000520828	BATF3	Q9NR55	127 aa		5.62	□□□□□ -1.51
PTK2-223	ENST00000520828	RCL1	Q9Y2P8	373 aa	Known RBP	5.62	□□□□□ -1.51
PTK2-223	ENST00000520828		U3KQE9	123 aa		5.62	□□□□□ -1.51

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