RNA–Protein interactions for RNA: ENST00000517862.1

CPNE3-204, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 654 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-204ENST00000517862 IFNGR2P38484 337 aa1.84□□□□□ -2.11
CPNE3-204ENST00000517862 HAAOP46952 286 aa1.84□□□□□ -2.11
CPNE3-204ENST00000517862 SULT1A2P50226 295 aa1.84□□□□□ -2.11
CPNE3-204ENST00000517862 RAB2AP61019 212 aa1.84□□□□□ -2.11
CPNE3-204ENST00000517862 DAD1P61803 113 aa1.84□□□□□ -2.11
CPNE3-204ENST00000517862 CTAG1AP78358 180 aa1.84□□□□□ -2.11
CPNE3-204ENST00000517862 FAM3AP98173 230 aa1.84□□□□□ -2.11
CPNE3-204ENST00000517862 ATP5G2Q06055 141 aa1.84□□□□□ -2.11
CPNE3-204ENST00000517862 MED21Q13503 144 aa1.84□□□□□ -2.11
CPNE3-204ENST00000517862 COX19Q49B96 90 aa1.84□□□□□ -2.11
CPNE3-204ENST00000517862 PDZD11Q5EBL8 140 aa1.84□□□□□ -2.11
CPNE3-204ENST00000517862 LAIR2Q6ISS4 152 aa1.84□□□□□ -2.11
CPNE3-204ENST00000517862 TIFABQ6ZNK6 161 aa1.84□□□□□ -2.11
CPNE3-204ENST00000517862 OLIG3Q7RTU3 272 aa1.84□□□□□ -2.11
CPNE3-204ENST00000517862 COMMD6Q7Z4G1 85 aa1.84□□□□□ -2.11
CPNE3-204ENST00000517862 DCXRQ7Z4W1 244 aa1.84□□□□□ -2.11
CPNE3-204ENST00000517862 SAXO1Q8IYX7 474 aa1.84□□□□□ -2.11
CPNE3-204ENST00000517862 ZNF555Q8NEP9 628 aa1.84□□□□□ -2.11
CPNE3-204ENST00000517862 OR5H2Q8NGV7 314 aa1.84□□□□□ -2.11
CPNE3-204ENST00000517862 OR2T10Q8NGZ9 312 aa1.84□□□□□ -2.11
CPNE3-204ENST00000517862 MFSD8Q8NHS3 518 aa1.84□□□□□ -2.11
CPNE3-204ENST00000517862 STOML3Q8TAV4 291 aa1.84□□□□□ -2.11
CPNE3-204ENST00000517862 SLC25A46Q96AG3 418 aa1.84□□□□□ -2.11
CPNE3-204ENST00000517862 SMIM19Q96E16 107 aa1.84□□□□□ -2.11
CPNE3-204ENST00000517862 RNF5Q99942 180 aa1.84□□□□□ -2.11
CPNE3-204ENST00000517862 CHCHD7Q9BUK0 85 aa1.84□□□□□ -2.11
CPNE3-204ENST00000517862 SLC22A4Q9H015 551 aa1.84□□□□□ -2.11
CPNE3-204ENST00000517862 ARL6Q9H0F7 186 aa1.84□□□□□ -2.11
CPNE3-204ENST00000517862 METTL9Q9H1A3 318 aa1.84□□□□□ -2.11
CPNE3-204ENST00000517862 MS4A6AQ9H2W1 248 aa1.84□□□□□ -2.11
CPNE3-204ENST00000517862 VCXQ9H320 206 aa1.84□□□□□ -2.11
CPNE3-204ENST00000517862 ANAPC11Q9NYG5 84 aa1.84□□□□□ -2.11
CPNE3-204ENST00000517862 ENOPH1Q9UHY7 261 aa1.84□□□□□ -2.11
CPNE3-204ENST00000517862 RWDD2AQ9UIY3 292 aa1.84□□□□□ -2.11
CPNE3-204ENST00000517862 POMPQ9Y244 141 aa1.84□□□□□ -2.11
CPNE3-204ENST00000517862 SBDSQ9Y3A5 250 aaKnown RBP eCLIP1.84□□□□□ -2.11
CPNE3-204ENST00000517862 IGHV1-3A0A0C4DH29 117 aa1.83□□□□□ -2.12
CPNE3-204ENST00000517862 TMEM189A5PLL7 270 aa1.83□□□□□ -2.12
CPNE3-204ENST00000517862 MRPS14O60783 128 aaKnown RBP1.83□□□□□ -2.12
CPNE3-204ENST00000517862 SCO1O75880 301 aa1.83□□□□□ -2.12
CPNE3-204ENST00000517862 ARL6IP5O75915 188 aa1.83□□□□□ -2.12
CPNE3-204ENST00000517862 SOX14O95416 240 aa1.83□□□□□ -2.12
CPNE3-204ENST00000517862 IL3P08700 152 aa1.83□□□□□ -2.12
CPNE3-204ENST00000517862 OCM2P0CE71 109 aa1.83□□□□□ -2.12
CPNE3-204ENST00000517862 SCGB1C2P0DMR2 95 aa1.83□□□□□ -2.12
CPNE3-204ENST00000517862 NQO1P15559 274 aaKnown RBP1.83□□□□□ -2.12
CPNE3-204ENST00000517862 PPP1R1AQ13522 171 aa1.83□□□□□ -2.12
CPNE3-204ENST00000517862 EBI3Q14213 229 aa1.83□□□□□ -2.12
CPNE3-204ENST00000517862 SP6Q3SY56 376 aa1.83□□□□□ -2.12
CPNE3-204ENST00000517862 LINC00483Q53H64 154 aa1.83□□□□□ -2.12
CPNE3-204ENST00000517862 CENPWQ5EE01 88 aa1.83□□□□□ -2.12
CPNE3-204ENST00000517862 AP1ARQ63HQ0 302 aa1.83□□□□□ -2.12
CPNE3-204ENST00000517862 GLYATQ6IB77 296 aa1.83□□□□□ -2.12
CPNE3-204ENST00000517862 TTC33Q6PID6 262 aaPredicted RBP1.83□□□□□ -2.12
CPNE3-204ENST00000517862 Q8N6K4 173 aa1.83□□□□□ -2.12
CPNE3-204ENST00000517862 SCGB1C1Q8TD33 95 aa1.83□□□□□ -2.12
CPNE3-204ENST00000517862 SMIM12Q96EX1 92 aa1.83□□□□□ -2.12
CPNE3-204ENST00000517862 TEX37Q96LM6 180 aa1.83□□□□□ -2.12
CPNE3-204ENST00000517862 PPP1R36Q96LQ0 422 aa1.83□□□□□ -2.12
CPNE3-204ENST00000517862 YPEL4Q96NS1 127 aa1.83□□□□□ -2.12
CPNE3-204ENST00000517862 TSSK6Q9BXA6 273 aa1.83□□□□□ -2.12
CPNE3-204ENST00000517862 FGFR1OP2Q9NVK5 253 aa1.83□□□□□ -2.12
CPNE3-204ENST00000517862 ZNF230Q9UIE0 474 aaPredicted RBP1.83□□□□□ -2.12
CPNE3-204ENST00000517862 A0A087X0T9 212 aa1.82□□□□□ -2.12
CPNE3-204ENST00000517862 A8MWL6 223 aa1.82□□□□□ -2.12
CPNE3-204ENST00000517862 C9JQL5 133 aa1.82□□□□□ -2.12
CPNE3-204ENST00000517862 RGS5O15539 181 aa1.82□□□□□ -2.12
CPNE3-204ENST00000517862 ATP5HO75947 161 aa1.82□□□□□ -2.12
CPNE3-204ENST00000517862 IGLV3-1P01715 115 aa1.82□□□□□ -2.12
CPNE3-204ENST00000517862 CELP19835 753 aa1.82□□□□□ -2.12
CPNE3-204ENST00000517862 CXCL3P19876 107 aa1.82□□□□□ -2.12
CPNE3-204ENST00000517862 ALDH3A1P30838 453 aa1.82□□□□□ -2.12
CPNE3-204ENST00000517862 CBX5P45973 191 aa1.82□□□□□ -2.12
CPNE3-204ENST00000517862 MAP2K4P45985 399 aa1.82□□□□□ -2.12
CPNE3-204ENST00000517862 MP68P56378 58 aa1.82□□□□□ -2.12
CPNE3-204ENST00000517862 EDDM3BP56851 147 aa1.82□□□□□ -2.12
CPNE3-204ENST00000517862 HBA1P69905 142 aa1.82□□□□□ -2.12
CPNE3-204ENST00000517862 MRPS15P82914 257 aaKnown RBP1.82□□□□□ -2.12
CPNE3-204ENST00000517862 MESTQ5EB52 335 aa1.82□□□□□ -2.12
CPNE3-204ENST00000517862 SPATA31B1PQ5VZV4 182 aa1.82□□□□□ -2.12
CPNE3-204ENST00000517862 Q6P435 159 aa1.82□□□□□ -2.12
CPNE3-204ENST00000517862 FAM131AQ6UXB0 335 aa1.82□□□□□ -2.12
CPNE3-204ENST00000517862 OR8B12Q8NGG6 310 aa1.82□□□□□ -2.12
CPNE3-204ENST00000517862 ZCCHC13Q8WW36 166 aaKnown RBP1.82□□□□□ -2.12
CPNE3-204ENST00000517862 APOBEC3DQ96AK3 386 aaPredicted RBP1.82□□□□□ -2.12
CPNE3-204ENST00000517862 TESCQ96BS2 214 aa1.82□□□□□ -2.12
CPNE3-204ENST00000517862 OR52B2Q96RD2 323 aa1.82□□□□□ -2.12
CPNE3-204ENST00000517862 RETNLBQ9BQ08 111 aa1.82□□□□□ -2.12
CPNE3-204ENST00000517862 MROQ9BYG7 248 aa1.82□□□□□ -2.12
CPNE3-204ENST00000517862 DERL2Q9GZP9 239 aa1.82□□□□□ -2.12
CPNE3-204ENST00000517862 MAP1LC3AQ9H492 121 aa1.82□□□□□ -2.12
CPNE3-204ENST00000517862 LINC00574Q9H8X3 128 aa1.82□□□□□ -2.12
CPNE3-204ENST00000517862 OPTCQ9UBM4 332 aa1.82□□□□□ -2.12
CPNE3-204ENST00000517862 MARCOQ9UEW3 520 aaPredicted RBP1.82□□□□□ -2.12
CPNE3-204ENST00000517862 C14orf166Q9Y224 244 aaKnown RBP1.82□□□□□ -2.12
CPNE3-204ENST00000517862 SLC35A3Q9Y2D2 325 aa1.82□□□□□ -2.12
CPNE3-204ENST00000517862 ALG5Q9Y673 324 aa1.82□□□□□ -2.12
CPNE3-204ENST00000517862 OR4C46A6NHA9 309 aa1.81□□□□□ -2.12
CPNE3-204ENST00000517862 CD300LBA8K4G0 201 aa1.81□□□□□ -2.12
CPNE3-204ENST00000517862 LRRN3E7EW58 273 aa1.81□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms