RNA–Protein interactions for RNA: ENST00000517691.1

SKP1-204, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 2,033 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-204ENST00000517691 CTSDP07339 412 aaPredicted RBP2.11□□□□□ -2.07
SKP1-204ENST00000517691 RBMY1CP0DJD4 496 aa2.11□□□□□ -2.07
SKP1-204ENST00000517691 DEFA4P12838 97 aa2.11□□□□□ -2.07
SKP1-204ENST00000517691 IL7P13232 177 aa2.11□□□□□ -2.07
SKP1-204ENST00000517691 CCR6P51684 374 aa2.11□□□□□ -2.07
SKP1-204ENST00000517691 SUB1P53999 127 aaKnown RBP eCLIP2.11□□□□□ -2.073e-16■■■■■ 72.7
SKP1-204ENST00000517691 RAB25P57735 213 aa2.11□□□□□ -2.07
SKP1-204ENST00000517691 TPPP2P59282 170 aa2.11□□□□□ -2.07
SKP1-204ENST00000517691 RND3P61587 244 aa2.11□□□□□ -2.07
SKP1-204ENST00000517691 RBX1P62877 108 aa2.11□□□□□ -2.07
SKP1-204ENST00000517691 RPL32P62910 135 aaKnown RBP2.11□□□□□ -2.07
SKP1-204ENST00000517691 NDPQ00604 133 aa2.11□□□□□ -2.07
SKP1-204ENST00000517691 SURF2Q15527 256 aaPredicted RBP2.11□□□□□ -2.07
SKP1-204ENST00000517691 ZNF726P1Q15940 193 aa2.11□□□□□ -2.07
SKP1-204ENST00000517691 TCTEX1D4Q5JR98 221 aa2.11□□□□□ -2.07
SKP1-204ENST00000517691 LHFPL1Q86WI0 220 aa2.11□□□□□ -2.07
SKP1-204ENST00000517691 NDUFA11Q86Y39 141 aa2.11□□□□□ -2.07
SKP1-204ENST00000517691 ZNF695Q8IW36 515 aa2.11□□□□□ -2.07
SKP1-204ENST00000517691 SGPP2Q8IWX5 399 aa2.11□□□□□ -2.07
SKP1-204ENST00000517691 LGI3Q8N145 548 aa2.11□□□□□ -2.07
SKP1-204ENST00000517691 TCTEX1D1Q8N7M0 179 aa2.11□□□□□ -2.07
SKP1-204ENST00000517691 OR4A5Q8NH83 315 aa2.11□□□□□ -2.07
SKP1-204ENST00000517691 TMEM167AQ8TBQ9 72 aa2.11□□□□□ -2.07
SKP1-204ENST00000517691 S100ZQ8WXG8 99 aa2.11□□□□□ -2.07
SKP1-204ENST00000517691 TP53RKQ96S44 253 aa2.11□□□□□ -2.07
SKP1-204ENST00000517691 SPIN2AQ99865 258 aa2.11□□□□□ -2.07
SKP1-204ENST00000517691 SPIN2BQ9BPZ2 258 aa2.11□□□□□ -2.07
SKP1-204ENST00000517691 RTBDNQ9BSG5 229 aaPredicted RBP2.11□□□□□ -2.07
SKP1-204ENST00000517691 COMMD5Q9GZQ3 224 aa2.11□□□□□ -2.07
SKP1-204ENST00000517691 MAP1LC3AQ9H492 121 aa2.11□□□□□ -2.07
SKP1-204ENST00000517691 COA4Q9NYJ1 87 aa2.11□□□□□ -2.07
SKP1-204ENST00000517691 COMMD9Q9P000 198 aa2.11□□□□□ -2.07
SKP1-204ENST00000517691 VSIG4Q9Y279 399 aa2.11□□□□□ -2.07
SKP1-204ENST00000517691 FBXO7Q9Y3I1 522 aa2.11□□□□□ -2.07
SKP1-204ENST00000517691 NUBP2Q9Y5Y2 271 aa2.11□□□□□ -2.07
SKP1-204ENST00000517691 TEX50A0A1B0GTY4 177 aa2.1□□□□□ -2.07
SKP1-204ENST00000517691 CRYM-AS1A6NIL9 109 aa2.1□□□□□ -2.07
SKP1-204ENST00000517691 UPK2O00526 184 aa2.1□□□□□ -2.07
SKP1-204ENST00000517691 NUPL2O15504 423 aaKnown RBP2.1□□□□□ -2.07
SKP1-204ENST00000517691 IFNA17P01571 189 aa2.1□□□□□ -2.07
SKP1-204ENST00000517691 IGHV3-11P01762 117 aa2.1□□□□□ -2.07
SKP1-204ENST00000517691 PRH1P02810 166 aa2.1□□□□□ -2.07
SKP1-204ENST00000517691 TRGV3P03979 118 aa2.1□□□□□ -2.07
SKP1-204ENST00000517691 REG1AP05451 166 aa2.1□□□□□ -2.07
SKP1-204ENST00000517691 OR5AC1P0C628 307 aa2.1□□□□□ -2.07
SKP1-204ENST00000517691 RPL27AP46776 148 aaKnown RBP2.1□□□□□ -2.07
SKP1-204ENST00000517691 HOXA1P49639 335 aaPredicted RBP2.1□□□□□ -2.07
SKP1-204ENST00000517691 AKR1C2P52895 323 aa2.1□□□□□ -2.07
SKP1-204ENST00000517691 CD300CQ08708 224 aa2.1□□□□□ -2.07
SKP1-204ENST00000517691 FHL2Q14192 279 aa2.1□□□□□ -2.07
SKP1-204ENST00000517691 ZNF846Q147U1 533 aa2.1□□□□□ -2.07
SKP1-204ENST00000517691 IZUMO4Q1ZYL8 232 aa2.1□□□□□ -2.07
SKP1-204ENST00000517691 ZNF585BQ52M93 769 aa2.1□□□□□ -2.07
SKP1-204ENST00000517691 C10orf55Q5SWW7 151 aa2.1□□□□□ -2.07
SKP1-204ENST00000517691 C18orf65Q6ZTR6 163 aa2.1□□□□□ -2.07
SKP1-204ENST00000517691 SLC25A42Q86VD7 318 aa2.1□□□□□ -2.07
SKP1-204ENST00000517691 KLHL30-AS1Q8NEE0 82 aa2.1□□□□□ -2.07
SKP1-204ENST00000517691 SRSF12Q8WXF0 261 aaKnown RBP2.1□□□□□ -2.07
SKP1-204ENST00000517691 OR10C1Q96KK4 312 aa2.1□□□□□ -2.07
SKP1-204ENST00000517691 DUX3Q96PT4 197 aa2.1□□□□□ -2.07
SKP1-204ENST00000517691 TSC22D3Q99576 134 aa2.1□□□□□ -2.07
SKP1-204ENST00000517691 SLC25A21Q9BQT8 299 aaPredicted RBP2.1□□□□□ -2.07
SKP1-204ENST00000517691 PDCD10Q9BUL8 212 aa2.1□□□□□ -2.07
SKP1-204ENST00000517691 NAA60Q9H7X0 242 aa2.1□□□□□ -2.07
SKP1-204ENST00000517691 FKBP11Q9NYL4 201 aa2.1□□□□□ -2.07
SKP1-204ENST00000517691 BET1LQ9NYM9 111 aa2.1□□□□□ -2.07
SKP1-204ENST00000517691 PRNDQ9UKY0 176 aa2.1□□□□□ -2.07
SKP1-204ENST00000517691 OR51B2Q9Y5P1 312 aa2.1□□□□□ -2.07
SKP1-204ENST00000517691 DSCAML1Q8TD84 2053 aa2.1□□□□□ -2.07
SKP1-204ENST00000517691 A0A0G2JLM5 398 aa2.1□□□□□ -2.07
SKP1-204ENST00000517691 E7EUB6 86 aa2.1□□□□□ -2.07
SKP1-204ENST00000517691 F6UB75 175 aa2.1□□□□□ -2.07
SKP1-204ENST00000517691 LYRM1O43325 122 aa2.1□□□□□ -2.07
SKP1-204ENST00000517691 SSNA1O43805 119 aa2.1□□□□□ -2.07
SKP1-204ENST00000517691 IGKV1-39P01597 117 aa2.1□□□□□ -2.07
SKP1-204ENST00000517691 IGKV1-5P01602 117 aa2.1□□□□□ -2.07
SKP1-204ENST00000517691 RLN2P04090 185 aa2.1□□□□□ -2.07
SKP1-204ENST00000517691 IGKV1D-39P04432 117 aa2.1□□□□□ -2.07
SKP1-204ENST00000517691 OR9G9P0C7N8 305 aa2.1□□□□□ -2.07
SKP1-204ENST00000517691 TRAPPC2P0DI81 140 aa2.1□□□□□ -2.07
SKP1-204ENST00000517691 TRAPPC2BP0DI82 140 aa2.1□□□□□ -2.07
SKP1-204ENST00000517691 OR13C7P0DN81 318 aa2.1□□□□□ -2.07
SKP1-204ENST00000517691 PSMB8P28062 276 aa2.1□□□□□ -2.07
SKP1-204ENST00000517691 AMTP48728 403 aa2.1□□□□□ -2.07
SKP1-204ENST00000517691 APOC4P55056 127 aa2.1□□□□□ -2.07
SKP1-204ENST00000517691 DEFA5Q01523 94 aa2.1□□□□□ -2.07
SKP1-204ENST00000517691 ATP5G2Q06055 141 aa2.1□□□□□ -2.07
SKP1-204ENST00000517691 PPP1R1AQ13522 171 aa2.1□□□□□ -2.07
SKP1-204ENST00000517691 RBMS2Q15434 407 aaKnown RBP2.1□□□□□ -2.07
SKP1-204ENST00000517691 MRGPRG-AS1Q2M3A8 158 aa2.1□□□□□ -2.07
SKP1-204ENST00000517691 DEFB136Q30KP8 78 aa2.1□□□□□ -2.07
SKP1-204ENST00000517691 TMEM128Q5BJH2 165 aa2.1□□□□□ -2.07
SKP1-204ENST00000517691 SPINK9Q5DT21 86 aa2.1□□□□□ -2.07
SKP1-204ENST00000517691 C10orf25Q5T742 122 aa2.1□□□□□ -2.07
SKP1-204ENST00000517691 LINC00299Q6ZSB3 139 aa2.1□□□□□ -2.07
SKP1-204ENST00000517691 TTC9CQ8N5M4 171 aa2.1□□□□□ -2.07
SKP1-204ENST00000517691 ZNF491Q8N8L2 437 aa2.1□□□□□ -2.07
SKP1-204ENST00000517691 OR1L8Q8NGR8 309 aa2.1□□□□□ -2.07
SKP1-204ENST00000517691 DEDD2Q8WXF8 326 aa2.1□□□□□ -2.07
SKP1-204ENST00000517691 RBPMSQ93062 196 aaKnown RBP2.1□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms