RNA–Protein interactions for RNA: ENST00000514660.1

NEDD9-215, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 2

Gene NEDD9, Length 473 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-215ENST00000514660 YIF1AO95070 293 aa7.32□□□□□ -1.24
NEDD9-215ENST00000514660 IAPPP10997 89 aa7.32□□□□□ -1.24
NEDD9-215ENST00000514660 LRRC37A5PQ49AS3 106 aa7.32□□□□□ -1.24
NEDD9-215ENST00000514660 TOMM20LQ6UXN7 152 aa7.32□□□□□ -1.24
NEDD9-215ENST00000514660 OR2T35Q8NGX2 323 aa7.32□□□□□ -1.24
NEDD9-215ENST00000514660 DCANP1Q8TF63 244 aa7.32□□□□□ -1.24
NEDD9-215ENST00000514660 ASB13Q8WXK3 278 aa7.32□□□□□ -1.24
NEDD9-215ENST00000514660 SMIM8Q96KF7 97 aa7.32□□□□□ -1.24
NEDD9-215ENST00000514660 RAB40CQ96S21 281 aa7.32□□□□□ -1.24
NEDD9-215ENST00000514660 NEU1Q99519 415 aa7.32□□□□□ -1.24
NEDD9-215ENST00000514660 OR5AC2Q9NZP5 309 aa7.32□□□□□ -1.24
NEDD9-215ENST00000514660 THYN1Q9P016 225 aa7.32□□□□□ -1.24
NEDD9-215ENST00000514660 CACFD1Q9UGQ2 172 aa7.32□□□□□ -1.24
NEDD9-215ENST00000514660 RABAC1Q9UI14 185 aa7.32□□□□□ -1.24
NEDD9-215ENST00000514660 F11RQ9Y624 299 aaKnown RBP7.32□□□□□ -1.24
NEDD9-215ENST00000514660 DEFB1P60022 68 aa7.31□□□□□ -1.24
NEDD9-215ENST00000514660 S100A10P60903 97 aa7.31□□□□□ -1.24
NEDD9-215ENST00000514660 PAFAH1B2P68402 229 aa7.31□□□□□ -1.24
NEDD9-215ENST00000514660 SERTAD4-AS1Q5TG53 156 aa7.31□□□□□ -1.24
NEDD9-215ENST00000514660 PRSS54Q6PEW0 395 aa7.31□□□□□ -1.24
NEDD9-215ENST00000514660 AKAP14Q86UN6 197 aa7.31□□□□□ -1.24
NEDD9-215ENST00000514660 TCTE3Q8IZS6 198 aa7.31□□□□□ -1.24
NEDD9-215ENST00000514660 OR11H4Q8NGC9 324 aa7.31□□□□□ -1.24
NEDD9-215ENST00000514660 DTD1Q8TEA8 209 aa7.31□□□□□ -1.24
NEDD9-215ENST00000514660 TMEM170AQ8WVE7 144 aa7.31□□□□□ -1.24
NEDD9-215ENST00000514660 ATP6V0BQ99437 205 aa7.31□□□□□ -1.24
NEDD9-215ENST00000514660 SRSF8Q9BRL6 282 aaKnown RBP7.31□□□□□ -1.24
NEDD9-215ENST00000514660 ATG101Q9BSB4 218 aa7.31□□□□□ -1.24
NEDD9-215ENST00000514660 HEYLQ9NQ87 328 aaPredicted RBP7.31□□□□□ -1.24
NEDD9-215ENST00000514660 FAM24AA6NFZ4 105 aa7.3□□□□□ -1.24
NEDD9-215ENST00000514660 I3L2K1 104 aa7.3□□□□□ -1.24
NEDD9-215ENST00000514660 SSSCA1O60232 199 aa7.3□□□□□ -1.24
NEDD9-215ENST00000514660 RLN2P04090 185 aa7.3□□□□□ -1.24
NEDD9-215ENST00000514660 RNASE2P10153 161 aaKnown RBP7.3□□□□□ -1.24
NEDD9-215ENST00000514660 SLC25A4P12235 298 aa7.3□□□□□ -1.24
NEDD9-215ENST00000514660 FXYD7P58549 80 aa7.3□□□□□ -1.24
NEDD9-215ENST00000514660 TAS2R30P59541 319 aa7.3□□□□□ -1.24
NEDD9-215ENST00000514660 RPL11P62913 178 aaKnown RBP7.3□□□□□ -1.24
NEDD9-215ENST00000514660 ERHP84090 104 aaKnown RBP7.3□□□□□ -1.24
NEDD9-215ENST00000514660 BSXQ3C1V8 233 aa7.3□□□□□ -1.24
NEDD9-215ENST00000514660 Q6ZSN1 163 aa7.3□□□□□ -1.24
NEDD9-215ENST00000514660 STXBP6Q8NFX7 210 aa7.3□□□□□ -1.24
NEDD9-215ENST00000514660 GRAMD2BQ96HH9 432 aa7.3□□□□□ -1.24
NEDD9-215ENST00000514660 ENY2Q9NPA8 101 aa7.3□□□□□ -1.24
NEDD9-215ENST00000514660 PSENENQ9NZ42 101 aa7.3□□□□□ -1.24
NEDD9-215ENST00000514660 MBD2Q9UBB5 411 aa7.3□□□□□ -1.24
NEDD9-215ENST00000514660 PLA2G2DQ9UNK4 145 aa7.3□□□□□ -1.24
NEDD9-215ENST00000514660 PMS2P5A8MQ11 134 aa7.29□□□□□ -1.24
NEDD9-215ENST00000514660 E5RGE8 158 aa7.29□□□□□ -1.24
NEDD9-215ENST00000514660 H3BMM0 161 aa7.29□□□□□ -1.24
NEDD9-215ENST00000514660 PRM2P04554 102 aa7.29□□□□□ -1.24
NEDD9-215ENST00000514660 HOXA1P49639 335 aaPredicted RBP7.29□□□□□ -1.24
NEDD9-215ENST00000514660 FGL1Q08830 312 aa7.29□□□□□ -1.24
NEDD9-215ENST00000514660 C2orf83Q53S99 150 aa7.29□□□□□ -1.24
NEDD9-215ENST00000514660 SPANXN5Q5MJ07 72 aa7.29□□□□□ -1.24
NEDD9-215ENST00000514660 HSD17B13Q7Z5P4 300 aaPredicted RBP7.29□□□□□ -1.24
NEDD9-215ENST00000514660 C15orf53Q8NAA6 179 aa7.29□□□□□ -1.24
NEDD9-215ENST00000514660 THAP6Q8TBB0 222 aa7.29□□□□□ -1.24
NEDD9-215ENST00000514660 CIB3Q96Q77 187 aaPredicted RBP7.29□□□□□ -1.24
NEDD9-215ENST00000514660 Q9H8V8 135 aa7.29□□□□□ -1.24
NEDD9-215ENST00000514660 YTHDF2Q9Y5A9 579 aaKnown RBP7.29□□□□□ -1.24
NEDD9-215ENST00000514660 U3KQ87 197 aa7.29□□□□□ -1.24
NEDD9-215ENST00000514660 IGHV3OR16-12A0A075B7B8 117 aa7.28□□□□□ -1.24
NEDD9-215ENST00000514660 H3BP45 60 aa7.28□□□□□ -1.24
NEDD9-215ENST00000514660 L7N2F9 121 aa7.28□□□□□ -1.24
NEDD9-215ENST00000514660 PFDN1O60925 122 aa7.28□□□□□ -1.24
NEDD9-215ENST00000514660 TSC22D2O75157 780 aa7.28□□□□□ -1.24
NEDD9-215ENST00000514660 HTR2BP41595 481 aa7.28□□□□□ -1.24
NEDD9-215ENST00000514660 P2RY1P47900 373 aa7.28□□□□□ -1.24
NEDD9-215ENST00000514660 VAMP2P63027 116 aa7.28□□□□□ -1.24
NEDD9-215ENST00000514660 RELQ04864 619 aaPredicted RBP7.28□□□□□ -1.24
NEDD9-215ENST00000514660 ARL16Q0P5N6 197 aa7.28□□□□□ -1.24
NEDD9-215ENST00000514660 MLANAQ16655 118 aa7.28□□□□□ -1.24
NEDD9-215ENST00000514660 GDF5OSQ5U4N7 250 aa7.28□□□□□ -1.24
NEDD9-215ENST00000514660 TMEM14EPQ6UXP3 125 aa7.28□□□□□ -1.24
NEDD9-215ENST00000514660 C1orf158Q8N1D5 194 aa7.28□□□□□ -1.24
NEDD9-215ENST00000514660 TMEM252Q8N6L7 170 aa7.28□□□□□ -1.24
NEDD9-215ENST00000514660 ZNF114Q8NC26 417 aa7.28□□□□□ -1.24
NEDD9-215ENST00000514660 STRAPQ9Y3F4 350 aaKnown RBP7.28□□□□□ -1.24
NEDD9-215ENST00000514660 RNF213Q63HN8 5207 aa7.28□□□□□ -1.24
NEDD9-215ENST00000514660 FXYD6-FXYD2A0A087WZ82 144 aa7.27□□□□□ -1.25
NEDD9-215ENST00000514660 RPS10-NUDT3A0A1W2PQS6 291 aa7.27□□□□□ -1.25
NEDD9-215ENST00000514660 IGSF23A1L1A6 192 aa7.27□□□□□ -1.25
NEDD9-215ENST00000514660 PRSS46E5RG02 174 aa7.27□□□□□ -1.25
NEDD9-215ENST00000514660 NUDT3O95989 172 aa7.27□□□□□ -1.25
NEDD9-215ENST00000514660 C1QBP02746 253 aa7.27□□□□□ -1.25
NEDD9-215ENST00000514660 PVALBP20472 110 aaPredicted RBP7.27□□□□□ -1.25
NEDD9-215ENST00000514660 SNCAP37840 140 aa7.27□□□□□ -1.25
NEDD9-215ENST00000514660 SUB1P53999 127 aaKnown RBP eCLIP7.27□□□□□ -1.25
NEDD9-215ENST00000514660 ATP5IP56385 69 aaPredicted RBP7.27□□□□□ -1.25
NEDD9-215ENST00000514660 NHLH2Q02577 135 aa7.27□□□□□ -1.25
NEDD9-215ENST00000514660 ICAM4Q14773 271 aa7.27□□□□□ -1.25
NEDD9-215ENST00000514660 PSMG4Q5JS54 123 aa7.27□□□□□ -1.25
NEDD9-215ENST00000514660 SSX7Q7RTT5 188 aa7.27□□□□□ -1.25
NEDD9-215ENST00000514660 ZNF546Q86UE3 836 aa7.27□□□□□ -1.25
NEDD9-215ENST00000514660 SLC24A4Q8NFF2 622 aa7.27□□□□□ -1.25
NEDD9-215ENST00000514660 OR1P1Q8NH06 330 aa7.27□□□□□ -1.25
NEDD9-215ENST00000514660 Q9H3A6 140 aa7.27□□□□□ -1.25
NEDD9-215ENST00000514660 LYRM2Q9NU23 88 aaPredicted RBP7.27□□□□□ -1.25
NEDD9-215ENST00000514660 TNFSF18Q9UNG2 199 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms