RNA–Protein interactions for RNA: ENST00000514442.5

TCOF1-213, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,195 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-213ENST00000514442 EMP1P54849 157 aa10.72□□□□□ -0.69
TCOF1-213ENST00000514442 COLCA1Q6ZS62 124 aa10.72□□□□□ -0.69
TCOF1-213ENST00000514442 OR5AN1Q8NGI8 311 aa10.72□□□□□ -0.69
TCOF1-213ENST00000514442 TRAV40A0A0B4J280 105 aa10.72□□□□□ -0.69
TCOF1-213ENST00000514442 TAX1BP3O14907 124 aa10.72□□□□□ -0.69
TCOF1-213ENST00000514442 SMIM27A0A1W2PRY6 76 aa10.71□□□□□ -0.69
TCOF1-213ENST00000514442 ZNF503-AS2A6NEH8 195 aa10.71□□□□□ -0.69
TCOF1-213ENST00000514442 NTF4P34130 210 aa10.71□□□□□ -0.69
TCOF1-213ENST00000514442 DLX1P56177 255 aa10.71□□□□□ -0.69
TCOF1-213ENST00000514442 IFI27L1Q96BM0 104 aa10.71□□□□□ -0.69
TCOF1-213ENST00000514442 TRAV3A0A0B4J244 114 aa10.71□□□□□ -0.69
TCOF1-213ENST00000514442 IGKV1-6A0A0C4DH72 117 aa10.71□□□□□ -0.69
TCOF1-213ENST00000514442 ATP5LO75964 103 aa10.71□□□□□ -0.69
TCOF1-213ENST00000514442 NDUFB8O95169 186 aa10.71□□□□□ -0.69
TCOF1-213ENST00000514442 ADIPOQQ15848 244 aa10.71□□□□□ -0.69
TCOF1-213ENST00000514442 GAFA1Q96PS6 74 aa10.71□□□□□ -0.69
TCOF1-213ENST00000514442 PHLDA3Q9Y5J5 127 aa10.71□□□□□ -0.69
TCOF1-213ENST00000514442 HOXA3O43365 443 aaPredicted RBP10.71□□□□□ -0.7
TCOF1-213ENST00000514442 PYYP10082 97 aa10.71□□□□□ -0.7
TCOF1-213ENST00000514442 MYOD1P15172 320 aa10.71□□□□□ -0.7
TCOF1-213ENST00000514442 H7C2G1 150 aa10.71□□□□□ -0.7
TCOF1-213ENST00000514442 M0R3E3 92 aa10.71□□□□□ -0.7
TCOF1-213ENST00000514442 LYPD2Q6UXB3 125 aa10.71□□□□□ -0.7
TCOF1-213ENST00000514442 KIR3DL3Q8N743 410 aa10.71□□□□□ -0.7
TCOF1-213ENST00000514442 CACNG8Q8WXS5 425 aa10.71□□□□□ -0.7
TCOF1-213ENST00000514442 USF3Q68DE3 2245 aa10.7□□□□□ -0.7
TCOF1-213ENST00000514442 K7ENP7 123 aa10.7□□□□□ -0.7
TCOF1-213ENST00000514442 IGHV1-8P0DP01 117 aa10.7□□□□□ -0.7
TCOF1-213ENST00000514442 PRCDQ00LT1 54 aa10.7□□□□□ -0.7
TCOF1-213ENST00000514442 A0A1W2PRX2 142 aa10.7□□□□□ -0.7
TCOF1-213ENST00000514442 TMEM249Q2WGJ8 235 aa10.7□□□□□ -0.7
TCOF1-213ENST00000514442 C2orf83Q53S99 150 aa10.7□□□□□ -0.7
TCOF1-213ENST00000514442 PRSS33Q8NF86 280 aa10.7□□□□□ -0.7
TCOF1-213ENST00000514442 NUP37Q8NFH4 326 aa10.7□□□□□ -0.7
TCOF1-213ENST00000514442 LINC00473A8K010 186 aa10.7□□□□□ -0.7
TCOF1-213ENST00000514442 F8W1H4 67 aa10.7□□□□□ -0.7
TCOF1-213ENST00000514442 COL8A2P25067 703 aa10.7□□□□□ -0.7
TCOF1-213ENST00000514442 DTX1Q86Y01 620 aa10.7□□□□□ -0.7
TCOF1-213ENST00000514442 TRAV8-2A0A0B4J237 113 aa10.69□□□□□ -0.7
TCOF1-213ENST00000514442 IGHV1-24A0A0C4DH33 117 aa10.69□□□□□ -0.7
TCOF1-213ENST00000514442 K7EN84 100 aa10.69□□□□□ -0.7
TCOF1-213ENST00000514442 IGKV1-39P01597 117 aa10.69□□□□□ -0.7
TCOF1-213ENST00000514442 IGKCP01834 107 aa10.69□□□□□ -0.7
TCOF1-213ENST00000514442 IGKV1D-39P04432 117 aa10.69□□□□□ -0.7
TCOF1-213ENST00000514442 SLC25A2Q9BXI2 301 aa10.69□□□□□ -0.7
TCOF1-213ENST00000514442 TRAV5A0A0B4J249 113 aa10.69□□□□□ -0.7
TCOF1-213ENST00000514442 DPM2O94777 84 aa10.69□□□□□ -0.7
TCOF1-213ENST00000514442 LEPP41159 167 aa10.69□□□□□ -0.7
TCOF1-213ENST00000514442 Q8NFD4 153 aa10.69□□□□□ -0.7
TCOF1-213ENST00000514442 DDB2Q92466 427 aa10.69□□□□□ -0.7
TCOF1-213ENST00000514442 Q9H3A6 140 aa10.69□□□□□ -0.7
TCOF1-213ENST00000514442 G3V4G9 280 aa10.69□□□□□ -0.7
TCOF1-213ENST00000514442 ZNF138P52744 262 aa10.69□□□□□ -0.7
TCOF1-213ENST00000514442 FAM74A4Q5TZK3 123 aa10.69□□□□□ -0.7
TCOF1-213ENST00000514442 YAE1D1Q9NRH1 226 aa10.69□□□□□ -0.7
TCOF1-213ENST00000514442 GAGE2BQ13066 116 aa10.69□□□□□ -0.7
TCOF1-213ENST00000514442 GAGE2EQ4V326 116 aa10.69□□□□□ -0.7
TCOF1-213ENST00000514442 VMO1Q7Z5L0 202 aa10.69□□□□□ -0.7
TCOF1-213ENST00000514442 GAGE2DQ9UEU5 116 aa10.69□□□□□ -0.7
TCOF1-213ENST00000514442 IGLC1P0CG04 106 aa10.68□□□□□ -0.7
TCOF1-213ENST00000514442 E7EQL1 145 aa10.68□□□□□ -0.7
TCOF1-213ENST00000514442 TMEM219Q86XT9 240 aa10.68□□□□□ -0.7
TCOF1-213ENST00000514442 C11orf52Q96A22 123 aa10.68□□□□□ -0.7
TCOF1-213ENST00000514442 C11orf1Q9H5F2 150 aa10.68□□□□□ -0.7
TCOF1-213ENST00000514442 PLXNB3Q9ULL4 1909 aa10.68□□□□□ -0.7
TCOF1-213ENST00000514442 EFNA4P52798 201 aa10.68□□□□□ -0.7
TCOF1-213ENST00000514442 CD69Q07108 199 aa10.68□□□□□ -0.7
TCOF1-213ENST00000514442 A8MWV9 139 aa10.67□□□□□ -0.7
TCOF1-213ENST00000514442 PAX1P15863 534 aa10.67□□□□□ -0.7
TCOF1-213ENST00000514442 SLC25A48Q6ZT89 311 aaKnown RBP10.67□□□□□ -0.7
TCOF1-213ENST00000514442 ZNRD1Q9P1U0 126 aa10.67□□□□□ -0.7
TCOF1-213ENST00000514442 CHD3Q12873 2000 aaKnown RBP10.67□□□□□ -0.7
TCOF1-213ENST00000514442 BDP1A6H8Y1 2624 aa10.67□□□□□ -0.7
TCOF1-213ENST00000514442 SNRPD3P62318 126 aaKnown RBP10.67□□□□□ -0.7
TCOF1-213ENST00000514442 KLF5Q13887 457 aaPredicted RBP10.67□□□□□ -0.7
TCOF1-213ENST00000514442 RAX2Q96IS3 184 aa10.67□□□□□ -0.7
TCOF1-213ENST00000514442 COX6CP09669 75 aa10.67□□□□□ -0.7
TCOF1-213ENST00000514442 RHOGP84095 191 aa10.67□□□□□ -0.7
TCOF1-213ENST00000514442 CHAC1Q9BUX1 264 aa10.67□□□□□ -0.7
TCOF1-213ENST00000514442 KLK15Q9H2R5 256 aa10.67□□□□□ -0.7
TCOF1-213ENST00000514442 C2orf16Q68DN1 1984 aa10.67□□□□□ -0.7
TCOF1-213ENST00000514442 SYT8Q8NBV8 401 aa10.67□□□□□ -0.7
TCOF1-213ENST00000514442 GOLGB1Q14789 3259 aaKnown RBP10.66□□□□□ -0.7
TCOF1-213ENST00000514442 PF4P02776 101 aa10.66□□□□□ -0.7
TCOF1-213ENST00000514442 WT1P19544 449 aaPredicted RBP10.66□□□□□ -0.7
TCOF1-213ENST00000514442 BRD3OSQ6XYD6 125 aa10.66□□□□□ -0.7
TCOF1-213ENST00000514442 CIARTQ8N365 385 aaPredicted RBP10.66□□□□□ -0.7
TCOF1-213ENST00000514442 IGHV1-3A0A0C4DH29 117 aa10.66□□□□□ -0.7
TCOF1-213ENST00000514442 RRN3P1Q2M238 152 aa10.66□□□□□ -0.7
TCOF1-213ENST00000514442 OTORQ9NRC9 128 aa10.66□□□□□ -0.7
TCOF1-213ENST00000514442 SMPXQ9UHP9 88 aa10.66□□□□□ -0.7
TCOF1-213ENST00000514442 TRBV20OR9-2A0A075B6H5 130 aa10.66□□□□□ -0.7
TCOF1-213ENST00000514442 NDUFA3O95167 84 aa10.66□□□□□ -0.7
TCOF1-213ENST00000514442 PIP4P1Q86T03 277 aa10.66□□□□□ -0.7
TCOF1-213ENST00000514442 TCRBV4S1A1TA0A5B7 111 aa10.65□□□□□ -0.7
TCOF1-213ENST00000514442 RNF125Q96EQ8 232 aa10.65□□□□□ -0.7
TCOF1-213ENST00000514442 H0YJW9 148 aa10.65□□□□□ -0.7
TCOF1-213ENST00000514442 C11orf44Q8N8P7 122 aa10.65□□□□□ -0.7
TCOF1-213ENST00000514442 RSPO1Q2MKA7 263 aaPredicted RBP10.65□□□□□ -0.7
TCOF1-213ENST00000514442 FAM53AQ6NSI3 398 aaPredicted RBP10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms