RNA–Protein interactions for RNA: ENST00000512151.5

NUP54-211, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-211ENST00000512151 CCDC28AQ8IWP9 274 aa6.5□□□□□ -1.37
NUP54-211ENST00000512151 BAP18Q8IXM2 172 aa6.5□□□□□ -1.37
NUP54-211ENST00000512151 DTD1Q8TEA8 209 aa6.5□□□□□ -1.37
NUP54-211ENST00000512151 SRSF8Q9BRL6 282 aaKnown RBP6.5□□□□□ -1.37
NUP54-211ENST00000512151 RCL1Q9Y2P8 373 aaKnown RBP6.5□□□□□ -1.37
NUP54-211ENST00000512151 UFC1Q9Y3C8 167 aa6.5□□□□□ -1.37
NUP54-211ENST00000512151 ZNF705EA8MWA4 302 aaPredicted RBP6.49□□□□□ -1.37
NUP54-211ENST00000512151 E5RGE8 158 aa6.49□□□□□ -1.37
NUP54-211ENST00000512151 WRBO00258 174 aa6.49□□□□□ -1.37
NUP54-211ENST00000512151 CLEC3BP05452 202 aa6.49□□□□□ -1.37
NUP54-211ENST00000512151 MIFP14174 115 aa6.49□□□□□ -1.37
NUP54-211ENST00000512151 TFPI2P48307 235 aa6.49□□□□□ -1.37
NUP54-211ENST00000512151 HOXA1P49639 335 aaPredicted RBP6.49□□□□□ -1.37
NUP54-211ENST00000512151 S100A10P60903 97 aa6.49□□□□□ -1.37
NUP54-211ENST00000512151 KLK9Q2XQG4 91 aa6.49□□□□□ -1.37
NUP54-211ENST00000512151 RNF212Q495C1 297 aa6.49□□□□□ -1.37
NUP54-211ENST00000512151 TMEM190Q8WZ59 177 aa6.49□□□□□ -1.37
NUP54-211ENST00000512151 HEYLQ9NQ87 328 aaPredicted RBP6.49□□□□□ -1.37
NUP54-211ENST00000512151 KLK9Q9UKQ9 250 aa6.49□□□□□ -1.37
NUP54-211ENST00000512151 LSM5Q9Y4Y9 91 aaKnown RBP6.49□□□□□ -1.37
NUP54-211ENST00000512151 F11RQ9Y624 299 aaKnown RBP6.49□□□□□ -1.37
NUP54-211ENST00000512151 IGLV11-55A0A075B6I3 123 aa6.48□□□□□ -1.37
NUP54-211ENST00000512151 IGHV3OR16-8A0A075B7F1 116 aa6.48□□□□□ -1.37
NUP54-211ENST00000512151 PMS2P5A8MQ11 134 aa6.48□□□□□ -1.37
NUP54-211ENST00000512151 ZNF207O43670 478 aaKnown RBP6.48□□□□□ -1.37
NUP54-211ENST00000512151 SSSCA1O60232 199 aa6.48□□□□□ -1.37
NUP54-211ENST00000512151 RPL12P30050 165 aaKnown RBP6.48□□□□□ -1.37
NUP54-211ENST00000512151 GPR183P32249 361 aa6.48□□□□□ -1.37
NUP54-211ENST00000512151 P2RY1P47900 373 aa6.48□□□□□ -1.37
NUP54-211ENST00000512151 ERHP84090 104 aaKnown RBP6.48□□□□□ -1.37
NUP54-211ENST00000512151 MLANAQ16655 118 aa6.48□□□□□ -1.37
NUP54-211ENST00000512151 FAM74A1Q5RGS3 127 aa6.48□□□□□ -1.37
NUP54-211ENST00000512151 ZNF114Q8NC26 417 aa6.48□□□□□ -1.37
NUP54-211ENST00000512151 EEF1AKMT3Q96AZ1 226 aa6.48□□□□□ -1.37
NUP54-211ENST00000512151 SMIM8Q96KF7 97 aa6.48□□□□□ -1.37
NUP54-211ENST00000512151 RNF213Q63HN8 5207 aa6.47□□□□□ -1.37
NUP54-211ENST00000512151 NBDYA0A0U1RRE5 68 aa6.47□□□□□ -1.37
NUP54-211ENST00000512151 FAM24AA6NFZ4 105 aa6.47□□□□□ -1.37
NUP54-211ENST00000512151 C15orf62A8K5M9 175 aa6.47□□□□□ -1.37
NUP54-211ENST00000512151 KRBOX1C9JBD0 128 aa6.47□□□□□ -1.37
NUP54-211ENST00000512151 H3BP45 60 aa6.47□□□□□ -1.37
NUP54-211ENST00000512151 MED6O75586 246 aa6.47□□□□□ -1.37
NUP54-211ENST00000512151 FUSP35637 526 aaKnown RBP eCLIP6.47□□□□□ -1.37
NUP54-211ENST00000512151 C2orf83Q53S99 150 aa6.47□□□□□ -1.37
NUP54-211ENST00000512151 EIF5AL1Q6IS14 154 aaKnown RBP6.47□□□□□ -1.37
NUP54-211ENST00000512151 KRTAP5-3Q6L8H2 238 aa6.47□□□□□ -1.37
NUP54-211ENST00000512151 SLC25A24Q6NUK1 477 aa6.47□□□□□ -1.37
NUP54-211ENST00000512151 RNF141Q8WVD5 230 aa6.47□□□□□ -1.37
NUP54-211ENST00000512151 FRZBQ92765 325 aa6.47□□□□□ -1.37
NUP54-211ENST00000512151 ZNF503Q96F45 646 aa6.47□□□□□ -1.37
NUP54-211ENST00000512151 RNF2Q99496 336 aa6.47□□□□□ -1.37
NUP54-211ENST00000512151 ENY2Q9NPA8 101 aa6.47□□□□□ -1.37
NUP54-211ENST00000512151 PSENENQ9NZ42 101 aa6.47□□□□□ -1.37
NUP54-211ENST00000512151 IGKV3-7A0A075B6H7 116 aa6.46□□□□□ -1.37
NUP54-211ENST00000512151 IGHV3-21A0A0B4J1V1 117 aa6.46□□□□□ -1.37
NUP54-211ENST00000512151 PRSS46E5RG02 174 aa6.46□□□□□ -1.37
NUP54-211ENST00000512151 I3L2K1 104 aa6.46□□□□□ -1.37
NUP54-211ENST00000512151 IGHV3-48P01763 117 aa6.46□□□□□ -1.37
NUP54-211ENST00000512151 SMR3BP02814 79 aaPredicted RBP6.46□□□□□ -1.37
NUP54-211ENST00000512151 NPY1RP25929 384 aa6.46□□□□□ -1.37
NUP54-211ENST00000512151 SNCAP37840 140 aa6.46□□□□□ -1.37
NUP54-211ENST00000512151 ARL16Q0P5N6 197 aa6.46□□□□□ -1.37
NUP54-211ENST00000512151 SPANXN5Q5MJ07 72 aa6.46□□□□□ -1.37
NUP54-211ENST00000512151 LEMD1Q68G75 181 aa6.46□□□□□ -1.37
NUP54-211ENST00000512151 TMEM14EPQ6UXP3 125 aa6.46□□□□□ -1.37
NUP54-211ENST00000512151 UBAC2Q8NBM4 344 aa6.46□□□□□ -1.37
NUP54-211ENST00000512151 SLC24A4Q8NFF2 622 aa6.46□□□□□ -1.37
NUP54-211ENST00000512151 OR1P1Q8NH06 330 aa6.46□□□□□ -1.37
NUP54-211ENST00000512151 ZNF502Q8TBZ5 544 aa6.46□□□□□ -1.37
NUP54-211ENST00000512151 ZNF414Q96IQ9 312 aa6.46□□□□□ -1.37
NUP54-211ENST00000512151 ARV1Q9H2C2 271 aa6.46□□□□□ -1.37
NUP54-211ENST00000512151 FNDC4Q9H6D8 234 aaPredicted RBP6.46□□□□□ -1.37
NUP54-211ENST00000512151 DAZ1Q9NQZ3 744 aaKnown RBP6.46□□□□□ -1.37
NUP54-211ENST00000512151 CLEC5AQ9NY25 188 aa6.46□□□□□ -1.37
NUP54-211ENST00000512151 MRPL36Q9P0J6 103 aaKnown RBP6.46□□□□□ -1.37
NUP54-211ENST00000512151 CACFD1Q9UGQ2 172 aa6.46□□□□□ -1.37
NUP54-211ENST00000512151 TRBV7-1A0A0A6YYK4 115 aa6.45□□□□□ -1.38
NUP54-211ENST00000512151 IGSF23A1L1A6 192 aa6.45□□□□□ -1.38
NUP54-211ENST00000512151 RAB19A4D1S5 217 aa6.45□□□□□ -1.38
NUP54-211ENST00000512151 F8W735 103 aaPredicted RBP6.45□□□□□ -1.38
NUP54-211ENST00000512151 K7EIM0 57 aa6.45□□□□□ -1.38
NUP54-211ENST00000512151 DEFA4P12838 97 aa6.45□□□□□ -1.38
NUP54-211ENST00000512151 M6PRP20645 277 aa6.45□□□□□ -1.38
NUP54-211ENST00000512151 TAS2R30P59541 319 aa6.45□□□□□ -1.38
NUP54-211ENST00000512151 RPL7L1Q6DKI1 246 aaKnown RBP6.45□□□□□ -1.38
NUP54-211ENST00000512151 UQCC3Q6UW78 93 aa6.45□□□□□ -1.38
NUP54-211ENST00000512151 GBGT1Q8N5D6 347 aa6.45□□□□□ -1.38
NUP54-211ENST00000512151 FAM24BQ8N5W8 94 aa6.45□□□□□ -1.38
NUP54-211ENST00000512151 TMED6Q8WW62 240 aa6.45□□□□□ -1.38
NUP54-211ENST00000512151 SAT2Q96F10 170 aaPredicted RBP6.45□□□□□ -1.38
NUP54-211ENST00000512151 MISP3Q96FF7 219 aa6.45□□□□□ -1.38
NUP54-211ENST00000512151 BSCL2Q96G97 398 aaPredicted RBP6.45□□□□□ -1.38
NUP54-211ENST00000512151 LINC00052Q96N35 136 aa6.45□□□□□ -1.38
NUP54-211ENST00000512151 CIB3Q96Q77 187 aaPredicted RBP6.45□□□□□ -1.38
NUP54-211ENST00000512151 RAB40CQ96S21 281 aa6.45□□□□□ -1.38
NUP54-211ENST00000512151 MT-CO2P00403 227 aa6.44□□□□□ -1.38
NUP54-211ENST00000512151 METTL15P1P0C7V9 234 aa6.44□□□□□ -1.38
NUP54-211ENST00000512151 HIST1H1BP16401 226 aaKnown RBP6.44□□□□□ -1.38
NUP54-211ENST00000512151 PVALBP20472 110 aaPredicted RBP6.44□□□□□ -1.38
NUP54-211ENST00000512151 SULT1A2P50226 295 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms