RNA–Protein interactions for RNA: ENST00000511859.5

RNF4-216, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 1,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-216ENST00000511859 LINC00588Q9Y4M8 146 aa8.1□□□□□ -1.11
RNF4-216ENST00000511859 U3KQE9 123 aa8.1□□□□□ -1.11
RNF4-216ENST00000511859 LOC102723971A0A1B0GUV8 181 aa8.1□□□□□ -1.11
RNF4-216ENST00000511859 RPS10-NUDT3A0A1W2PQS6 291 aa8.1□□□□□ -1.11
RNF4-216ENST00000511859 J3QL48 77 aa8.1□□□□□ -1.11
RNF4-216ENST00000511859 WRBO00258 174 aa8.1□□□□□ -1.11
RNF4-216ENST00000511859 NUDT3O95989 172 aa8.1□□□□□ -1.11
RNF4-216ENST00000511859 SLC25A6P12236 298 aa8.1□□□□□ -1.11
RNF4-216ENST00000511859 FCN2Q15485 313 aa8.1□□□□□ -1.11
RNF4-216ENST00000511859 C16orf54Q6UWD8 224 aa8.1□□□□□ -1.11
RNF4-216ENST00000511859 OR4D5Q8NGN0 318 aa8.1□□□□□ -1.11
RNF4-216ENST00000511859 CLUHP3Q96NS8 147 aa8.1□□□□□ -1.11
RNF4-216ENST00000511859 HSPB7Q9UBY9 170 aa8.1□□□□□ -1.11
RNF4-216ENST00000511859 GOLT1BQ9Y3E0 138 aa8.1□□□□□ -1.11
RNF4-216ENST00000511859 LSM5Q9Y4Y9 91 aaKnown RBP8.1□□□□□ -1.11
RNF4-216ENST00000511859 hCG_2014768A0A024R1R8 64 aa8.09□□□□□ -1.12
RNF4-216ENST00000511859 CORTO00230 105 aa8.09□□□□□ -1.12
RNF4-216ENST00000511859 SSSCA1O60232 199 aa8.09□□□□□ -1.12
RNF4-216ENST00000511859 CLN5O75503 358 aa8.09□□□□□ -1.12
RNF4-216ENST00000511859 MBPP02686 304 aaPredicted RBP8.09□□□□□ -1.12
RNF4-216ENST00000511859 CXCL3P19876 107 aa8.09□□□□□ -1.12
RNF4-216ENST00000511859 SNCAP37840 140 aa8.09□□□□□ -1.12
RNF4-216ENST00000511859 H2BFSP57053 126 aa8.09□□□□□ -1.12
RNF4-216ENST00000511859 S100A10P60903 97 aa8.09□□□□□ -1.12
RNF4-216ENST00000511859 POLR2GP62487 172 aaKnown RBP eCLIP8.09□□□□□ -1.12
RNF4-216ENST00000511859 RRN3P1Q2M238 152 aa8.09□□□□□ -1.12
RNF4-216ENST00000511859 AARDQ4LEZ3 155 aa8.09□□□□□ -1.12
RNF4-216ENST00000511859 OR52E5Q8NH55 327 aa8.09□□□□□ -1.12
RNF4-216ENST00000511859 DTD1Q8TEA8 209 aa8.09□□□□□ -1.12
RNF4-216ENST00000511859 GLMPQ8WWB7 406 aa8.09□□□□□ -1.12
RNF4-216ENST00000511859 C2orf50Q96LR7 162 aa8.09□□□□□ -1.12
RNF4-216ENST00000511859 NRN1Q9NPD7 142 aa8.09□□□□□ -1.12
RNF4-216ENST00000511859 TRAV30A0A087WSZ9 112 aa8.08□□□□□ -1.12
RNF4-216ENST00000511859 A0A1W2PPQ1 181 aa8.08□□□□□ -1.12
RNF4-216ENST00000511859 H3BP45 60 aa8.08□□□□□ -1.12
RNF4-216ENST00000511859 SYNGR2O43760 224 aa8.08□□□□□ -1.12
RNF4-216ENST00000511859 HNRNPCP07910 306 aaKnown RBP eCLIP8.08□□□□□ -1.124e-7■□□□□ 10.8
RNF4-216ENST00000511859 USF2Q15853 346 aaPredicted RBP8.08□□□□□ -1.12
RNF4-216ENST00000511859 LRRC37A5PQ49AS3 106 aa8.08□□□□□ -1.12
RNF4-216ENST00000511859 SSX7Q7RTT5 188 aa8.08□□□□□ -1.12
RNF4-216ENST00000511859 OR11H7Q8NGC8 314 aa8.08□□□□□ -1.12
RNF4-216ENST00000511859 OR4X1Q8NH49 305 aa8.08□□□□□ -1.12
RNF4-216ENST00000511859 Q9H3A6 140 aa8.08□□□□□ -1.12
RNF4-216ENST00000511859 PAIP2BQ9ULR5 123 aaKnown RBP8.08□□□□□ -1.12
RNF4-216ENST00000511859 RCL1Q9Y2P8 373 aaKnown RBP8.08□□□□□ -1.12
RNF4-216ENST00000511859 LYRM9A8MSI8 78 aa8.07□□□□□ -1.12
RNF4-216ENST00000511859 RNASE2P10153 161 aaKnown RBP8.07□□□□□ -1.12
RNF4-216ENST00000511859 SUB1P53999 127 aaKnown RBP eCLIP8.07□□□□□ -1.12
RNF4-216ENST00000511859 FXYD7P58549 80 aa8.07□□□□□ -1.12
RNF4-216ENST00000511859 RRAS2P62070 204 aaPredicted RBP8.07□□□□□ -1.12
RNF4-216ENST00000511859 ID3Q02535 119 aa8.07□□□□□ -1.12
RNF4-216ENST00000511859 RAB32Q13637 225 aa8.07□□□□□ -1.12
RNF4-216ENST00000511859 CLINT1Q14677 625 aa8.07□□□□□ -1.12
RNF4-216ENST00000511859 SPATA31B1PQ5VZV4 182 aa8.07□□□□□ -1.12
RNF4-216ENST00000511859 ZNF709Q8N972 641 aa8.07□□□□□ -1.12
RNF4-216ENST00000511859 SAV1Q9H4B6 383 aaPredicted RBP8.07□□□□□ -1.12
RNF4-216ENST00000511859 A0A1B0GVG6 124 aa8.06□□□□□ -1.12
RNF4-216ENST00000511859 F5H768 121 aa8.06□□□□□ -1.12
RNF4-216ENST00000511859 INS-IGF2F8WCM5 200 aa8.06□□□□□ -1.12
RNF4-216ENST00000511859 FAM229AH3BQW9 127 aa8.06□□□□□ -1.12
RNF4-216ENST00000511859 K7EPK0 472 aa8.06□□□□□ -1.12
RNF4-216ENST00000511859 MED6O75586 246 aa8.06□□□□□ -1.12
RNF4-216ENST00000511859 IGKV3-20P01619 116 aa8.06□□□□□ -1.12
RNF4-216ENST00000511859 SPANXN5Q5MJ07 72 aa8.06□□□□□ -1.12
RNF4-216ENST00000511859 CDPF1Q6NVV7 123 aa8.06□□□□□ -1.12
RNF4-216ENST00000511859 Q6ZNX1 250 aa8.06□□□□□ -1.12
RNF4-216ENST00000511859 FOXI2Q6ZQN5 318 aa8.06□□□□□ -1.12
RNF4-216ENST00000511859 C1orf158Q8N1D5 194 aa8.06□□□□□ -1.12
RNF4-216ENST00000511859 SLC24A4Q8NFF2 622 aa8.06□□□□□ -1.12
RNF4-216ENST00000511859 Q8WTZ3 238 aa8.06□□□□□ -1.12
RNF4-216ENST00000511859 L7N2F9 121 aa8.05□□□□□ -1.12
RNF4-216ENST00000511859 EREGO14944 169 aa8.05□□□□□ -1.12
RNF4-216ENST00000511859 IGKV1-17P01599 117 aa8.05□□□□□ -1.12
RNF4-216ENST00000511859 HTR2BP41595 481 aa8.05□□□□□ -1.12
RNF4-216ENST00000511859 VAMP2P63027 116 aa8.05□□□□□ -1.12
RNF4-216ENST00000511859 PSG9Q00887 426 aa8.05□□□□□ -1.12
RNF4-216ENST00000511859 IL15RAQ13261 267 aa8.05□□□□□ -1.12
RNF4-216ENST00000511859 MLANAQ16655 118 aa8.05□□□□□ -1.12
RNF4-216ENST00000511859 SERTAD4-AS1Q5TG53 156 aa8.05□□□□□ -1.12
RNF4-216ENST00000511859 GDF5OSQ5U4N7 250 aa8.05□□□□□ -1.12
RNF4-216ENST00000511859 SIGLEC15Q6ZMC9 328 aa8.05□□□□□ -1.12
RNF4-216ENST00000511859 TMEM170AQ8WVE7 144 aa8.05□□□□□ -1.12
RNF4-216ENST00000511859 KRTAP1-5Q9BYS1 174 aa8.05□□□□□ -1.12
RNF4-216ENST00000511859 NMES1Q9C002 83 aa8.05□□□□□ -1.12
RNF4-216ENST00000511859 PSENENQ9NZ42 101 aa8.05□□□□□ -1.12
RNF4-216ENST00000511859 CACFD1Q9UGQ2 172 aa8.05□□□□□ -1.12
RNF4-216ENST00000511859 BUB3O43684 328 aa8.04□□□□□ -1.12
RNF4-216ENST00000511859 CCNKO75909 580 aa8.04□□□□□ -1.12
RNF4-216ENST00000511859 OPRK1P41145 380 aa8.04□□□□□ -1.12
RNF4-216ENST00000511859 PAX9P55771 341 aa8.04□□□□□ -1.12
RNF4-216ENST00000511859 DLK1P80370 383 aa8.04□□□□□ -1.12
RNF4-216ENST00000511859 TIGITQ495A1 244 aa8.04□□□□□ -1.12
RNF4-216ENST00000511859 OR4B1Q8NGF8 309 aa8.04□□□□□ -1.12
RNF4-216ENST00000511859 CHAC2Q8WUX2 184 aa8.04□□□□□ -1.12
RNF4-216ENST00000511859 PPP1R1CQ8WVI7 109 aa8.04□□□□□ -1.12
RNF4-216ENST00000511859 C17orf77Q96MU5 243 aa8.04□□□□□ -1.12
RNF4-216ENST00000511859 CIB3Q96Q77 187 aaPredicted RBP8.04□□□□□ -1.12
RNF4-216ENST00000511859 SLC35B3Q9H1N7 401 aa8.04□□□□□ -1.12
RNF4-216ENST00000511859 FNDC4Q9H6D8 234 aaPredicted RBP8.04□□□□□ -1.12
RNF4-216ENST00000511859 MRPL36Q9P0J6 103 aaKnown RBP8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms