RNA–Protein interactions for RNA: ENST00000511653.1

COPS4-209, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 1 (best) BASIC

Gene COPS4, Length 1,695 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-209ENST00000511653 DHODHQ02127 395 aa4.69□□□□□ -1.66
COPS4-209ENST00000511653 OR52I2Q8NH67 350 aa4.69□□□□□ -1.66
COPS4-209ENST00000511653 LHFPL5Q8TAF8 219 aa4.69□□□□□ -1.66
COPS4-209ENST00000511653 NARS2Q96I59 477 aaKnown RBP4.69□□□□□ -1.66
COPS4-209ENST00000511653 ZNF479Q96JC4 524 aa4.69□□□□□ -1.66
COPS4-209ENST00000511653 PDCD10Q9BUL8 212 aa4.69□□□□□ -1.66
COPS4-209ENST00000511653 C1QTNF4Q9BXJ3 329 aa4.69□□□□□ -1.66
COPS4-209ENST00000511653 NRN1Q9NPD7 142 aa4.69□□□□□ -1.66
COPS4-209ENST00000511653 COMMD3Q9UBI1 195 aa4.69□□□□□ -1.66
COPS4-209ENST00000511653 C3orf85A0A1B0GTC6 90 aa4.68□□□□□ -1.66
COPS4-209ENST00000511653 BUB3O43684 328 aa4.68□□□□□ -1.66
COPS4-209ENST00000511653 GABARAPO95166 117 aa4.68□□□□□ -1.66
COPS4-209ENST00000511653 IGKV2-30P06310 120 aa4.68□□□□□ -1.66
COPS4-209ENST00000511653 SPART-AS1P0CW21 52 aa4.68□□□□□ -1.66
COPS4-209ENST00000511653 HTN3P15516 51 aa4.68□□□□□ -1.66
COPS4-209ENST00000511653 ELK1P19419 428 aa4.68□□□□□ -1.66
COPS4-209ENST00000511653 NPY1RP25929 384 aa4.68□□□□□ -1.66
COPS4-209ENST00000511653 OR10J1P30954 320 aa4.68□□□□□ -1.66
COPS4-209ENST00000511653 SUB1P53999 127 aaKnown RBP eCLIP4.68□□□□□ -1.66
COPS4-209ENST00000511653 SNRPD3P62318 126 aaKnown RBP4.68□□□□□ -1.66
COPS4-209ENST00000511653 ZNF846Q147U1 533 aa4.68□□□□□ -1.66
COPS4-209ENST00000511653 TRIM16LQ309B1 348 aa4.68□□□□□ -1.66
COPS4-209ENST00000511653 FAM222AQ5U5X8 452 aa4.68□□□□□ -1.66
COPS4-209ENST00000511653 SIGLEC15Q6ZMC9 328 aa4.68□□□□□ -1.66
COPS4-209ENST00000511653 ZNF709Q8N972 641 aa4.68□□□□□ -1.66
COPS4-209ENST00000511653 OR4D10Q8NGI6 311 aa4.68□□□□□ -1.66
COPS4-209ENST00000511653 OR1S2Q8NGQ3 325 aa4.68□□□□□ -1.66
COPS4-209ENST00000511653 S100ZQ8WXG8 99 aa4.68□□□□□ -1.66
COPS4-209ENST00000511653 YIPF6Q96EC8 236 aa4.68□□□□□ -1.66
COPS4-209ENST00000511653 SLC35B3Q9H1N7 401 aa4.68□□□□□ -1.66
COPS4-209ENST00000511653 ENY2Q9NPA8 101 aa4.68□□□□□ -1.66
COPS4-209ENST00000511653 TRAV30A0A087WSZ9 112 aa4.67□□□□□ -1.66
COPS4-209ENST00000511653 F6UB75 175 aa4.67□□□□□ -1.66
COPS4-209ENST00000511653 HPGDSO60760 199 aa4.67□□□□□ -1.66
COPS4-209ENST00000511653 GAGE7O76087 117 aa4.67□□□□□ -1.66
COPS4-209ENST00000511653 IFNA21P01568 189 aa4.67□□□□□ -1.66
COPS4-209ENST00000511653 APOA1P02647 267 aa4.67□□□□□ -1.66
COPS4-209ENST00000511653 CD3DP04234 171 aa4.67□□□□□ -1.66
COPS4-209ENST00000511653 GAGE12FP0CL80 117 aa4.67□□□□□ -1.66
COPS4-209ENST00000511653 GAGE12GP0CL81 117 aa4.67□□□□□ -1.66
COPS4-209ENST00000511653 GAGE12IP0CL82 117 aa4.67□□□□□ -1.66
COPS4-209ENST00000511653 UCP1P25874 307 aa4.67□□□□□ -1.66
COPS4-209ENST00000511653 EIF2B2P49770 351 aaKnown RBP4.67□□□□□ -1.66
COPS4-209ENST00000511653 YPEL3P61236 119 aaPredicted RBP4.67□□□□□ -1.66
COPS4-209ENST00000511653 NUTF2P61970 127 aaKnown RBP4.67□□□□□ -1.66
COPS4-209ENST00000511653 NCS1P62166 190 aa4.67□□□□□ -1.66
COPS4-209ENST00000511653 IFITM2Q01629 132 aa4.67□□□□□ -1.66
COPS4-209ENST00000511653 GAGE1Q13065 139 aa4.67□□□□□ -1.66
COPS4-209ENST00000511653 GAGE4Q13068 117 aa4.67□□□□□ -1.66
COPS4-209ENST00000511653 SPCS2Q15005 226 aa4.67□□□□□ -1.66
COPS4-209ENST00000511653 NDUFA5Q16718 116 aa4.67□□□□□ -1.66
COPS4-209ENST00000511653 AARDQ4LEZ3 155 aa4.67□□□□□ -1.66
COPS4-209ENST00000511653 OR13C8Q8NGS7 320 aa4.67□□□□□ -1.66
COPS4-209ENST00000511653 ZNF486Q96H40 463 aaPredicted RBP4.67□□□□□ -1.66
COPS4-209ENST00000511653 KLK11Q9UBX7 282 aa4.67□□□□□ -1.66
COPS4-209ENST00000511653 RFNGQ9Y644 331 aa4.67□□□□□ -1.66
COPS4-209ENST00000511653 SOCS3O14543 225 aa4.67□□□□□ -1.66
COPS4-209ENST00000511653 NOL3O60936 208 aaKnown RBP4.67□□□□□ -1.66
COPS4-209ENST00000511653 SCGB2A1O75556 95 aa4.67□□□□□ -1.66
COPS4-209ENST00000511653 PRSS2P07478 247 aa4.67□□□□□ -1.66
COPS4-209ENST00000511653 OR5AC1P0C628 307 aa4.67□□□□□ -1.66
COPS4-209ENST00000511653 HTR2BP41595 481 aa4.67□□□□□ -1.66
COPS4-209ENST00000511653 NKX2-1P43699 371 aaPredicted RBP4.67□□□□□ -1.66
COPS4-209ENST00000511653 AP2S1P53680 142 aaPredicted RBP4.67□□□□□ -1.66
COPS4-209ENST00000511653 SPCS3P61009 180 aa4.67□□□□□ -1.66
COPS4-209ENST00000511653 MEF2DQ14814 521 aa4.67□□□□□ -1.66
COPS4-209ENST00000511653 C2orf83Q53S99 150 aa4.67□□□□□ -1.66
COPS4-209ENST00000511653 RNASE10Q5GAN6 216 aaKnown RBP4.67□□□□□ -1.66
COPS4-209ENST00000511653 C1orf134Q5TEV5 83 aa4.67□□□□□ -1.66
COPS4-209ENST00000511653 C1orf158Q8N1D5 194 aa4.67□□□□□ -1.66
COPS4-209ENST00000511653 SLC24A4Q8NFF2 622 aa4.67□□□□□ -1.66
COPS4-209ENST00000511653 OR51G1Q8NGK1 321 aa4.67□□□□□ -1.66
COPS4-209ENST00000511653 RNASE11Q8TAA1 199 aaKnown RBP4.67□□□□□ -1.66
COPS4-209ENST00000511653 DYNC2LI1Q8TCX1 351 aa4.67□□□□□ -1.66
COPS4-209ENST00000511653 Q8WTZ3 238 aa4.67□□□□□ -1.66
COPS4-209ENST00000511653 GPR146Q96CH1 333 aa4.67□□□□□ -1.66
COPS4-209ENST00000511653 ACY3Q96HD9 319 aa4.67□□□□□ -1.66
COPS4-209ENST00000511653 NIPSNAP3BQ9BS92 247 aa4.67□□□□□ -1.66
COPS4-209ENST00000511653 FUNDC2Q9BWH2 189 aa4.67□□□□□ -1.66
COPS4-209ENST00000511653 SAV1Q9H4B6 383 aaPredicted RBP4.67□□□□□ -1.66
COPS4-209ENST00000511653 COPZ2Q9P299 210 aa4.67□□□□□ -1.66
COPS4-209ENST00000511653 CACNG5Q9UF02 275 aa4.67□□□□□ -1.66
COPS4-209ENST00000511653 IGLV5-37A0A075B6J1 123 aa4.66□□□□□ -1.66
COPS4-209ENST00000511653 TMEM189A5PLL7 270 aa4.66□□□□□ -1.66
COPS4-209ENST00000511653 SMIM9A6NGZ8 99 aa4.66□□□□□ -1.66
COPS4-209ENST00000511653 C16orf90A8MZG2 172 aa4.66□□□□□ -1.66
COPS4-209ENST00000511653 CDS2O95674 445 aa4.66□□□□□ -1.66
COPS4-209ENST00000511653 PRM2P04554 102 aa4.66□□□□□ -1.66
COPS4-209ENST00000511653 SLC25A4P12235 298 aa4.66□□□□□ -1.66
COPS4-209ENST00000511653 RORCP51449 518 aa4.66□□□□□ -1.66
COPS4-209ENST00000511653 RNF212Q495C1 297 aa4.66□□□□□ -1.66
COPS4-209ENST00000511653 SOHLH1Q5JUK2 328 aa4.66□□□□□ -1.66
COPS4-209ENST00000511653 FAAP20Q6NZ36 180 aa4.66□□□□□ -1.66
COPS4-209ENST00000511653 ARRDC1Q8N5I2 433 aa4.66□□□□□ -1.66
COPS4-209ENST00000511653 MAPKAPK5-AS1Q8N8E1 139 aa4.66□□□□□ -1.66
COPS4-209ENST00000511653 OR4B1Q8NGF8 309 aa4.66□□□□□ -1.66
COPS4-209ENST00000511653 THAP6Q8TBB0 222 aa4.66□□□□□ -1.66
COPS4-209ENST00000511653 MARCH1Q8TCQ1 289 aa4.66□□□□□ -1.66
COPS4-209ENST00000511653 RNASEH2CQ8TDP1 164 aaKnown RBP4.66□□□□□ -1.66
COPS4-209ENST00000511653 GLYATL2Q8WU03 294 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms