RNA–Protein interactions for RNA: ENST00000510906.5

PDPN-209, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 786 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-209ENST00000510906 PSMG4Q5JS54 123 aa6.26□□□□□ -1.41
PDPN-209ENST00000510906 ACTL10Q5JWF8 245 aa6.26□□□□□ -1.41
PDPN-209ENST00000510906 TMEM217Q8N7C4 229 aa6.26□□□□□ -1.41
PDPN-209ENST00000510906 C2CD4CQ8TF44 421 aa6.26□□□□□ -1.41
PDPN-209ENST00000510906 S100ZQ8WXG8 99 aa6.26□□□□□ -1.41
PDPN-209ENST00000510906 IGKV1OR2-108A0A075B7D4 117 aa6.25□□□□□ -1.41
PDPN-209ENST00000510906 NUPR2A6NF83 97 aa6.25□□□□□ -1.41
PDPN-209ENST00000510906 NAP1L6A6NFF2 107 aa6.25□□□□□ -1.41
PDPN-209ENST00000510906 PRSS46E5RG02 174 aa6.25□□□□□ -1.41
PDPN-209ENST00000510906 H3BP45 60 aa6.25□□□□□ -1.41
PDPN-209ENST00000510906 DEFB4AO15263 64 aa6.25□□□□□ -1.41
PDPN-209ENST00000510906 MED6O75586 246 aa6.25□□□□□ -1.41
PDPN-209ENST00000510906 IL7P13232 177 aa6.25□□□□□ -1.41
PDPN-209ENST00000510906 ANXA7P20073 488 aaKnown RBP6.25□□□□□ -1.41
PDPN-209ENST00000510906 AP2S1P53680 142 aaPredicted RBP6.25□□□□□ -1.41
PDPN-209ENST00000510906 LYZP61626 148 aa6.25□□□□□ -1.41
PDPN-209ENST00000510906 OR8G2PQ6IF36 304 aa6.25□□□□□ -1.41
PDPN-209ENST00000510906 CEMP1Q6PRD7 247 aaPredicted RBP6.25□□□□□ -1.41
PDPN-209ENST00000510906 GSG1LQ6UXU4 331 aa6.25□□□□□ -1.41
PDPN-209ENST00000510906 SIGLEC15Q6ZMC9 328 aa6.25□□□□□ -1.41
PDPN-209ENST00000510906 Q8N1X5 172 aa6.25□□□□□ -1.41
PDPN-209ENST00000510906 THAP8Q8NA92 274 aa6.25□□□□□ -1.41
PDPN-209ENST00000510906 CIB3Q96Q77 187 aaPredicted RBP6.25□□□□□ -1.41
PDPN-209ENST00000510906 RAB40CQ96S21 281 aa6.25□□□□□ -1.41
PDPN-209ENST00000510906 NRN1Q9NPD7 142 aa6.25□□□□□ -1.41
PDPN-209ENST00000510906 OR4E1P0C645 316 aa6.24□□□□□ -1.41
PDPN-209ENST00000510906 SPP1P10451 314 aa6.24□□□□□ -1.41
PDPN-209ENST00000510906 DEFB1P60022 68 aa6.24□□□□□ -1.41
PDPN-209ENST00000510906 NANOS2P60321 138 aaKnown RBP6.24□□□□□ -1.41
PDPN-209ENST00000510906 POLR2GP62487 172 aaKnown RBP eCLIP6.24□□□□□ -1.41
PDPN-209ENST00000510906 ZNF846Q147U1 533 aa6.24□□□□□ -1.41
PDPN-209ENST00000510906 SPANXN5Q5MJ07 72 aa6.24□□□□□ -1.41
PDPN-209ENST00000510906 CFAP161Q6P656 301 aa6.24□□□□□ -1.41
PDPN-209ENST00000510906 MORN3Q6PF18 240 aaPredicted RBP6.24□□□□□ -1.41
PDPN-209ENST00000510906 PHLDA1Q8WV24 401 aaPredicted RBP6.24□□□□□ -1.41
PDPN-209ENST00000510906 TRGV9Q99603 122 aa6.24□□□□□ -1.41
PDPN-209ENST00000510906 C11orf68Q9H3H3 251 aaKnown RBP6.24□□□□□ -1.41
PDPN-209ENST00000510906 CLEC5AQ9NY25 188 aa6.24□□□□□ -1.41
PDPN-209ENST00000510906 IGHV4-28A0A0C4DH34 117 aa6.23□□□□□ -1.41
PDPN-209ENST00000510906 CENPXA8MT69 81 aa6.23□□□□□ -1.41
PDPN-209ENST00000510906 SNRPGP15A8MWD9 76 aa6.23□□□□□ -1.41
PDPN-209ENST00000510906 PLA2G10O15496 165 aa6.23□□□□□ -1.41
PDPN-209ENST00000510906 FABP1P07148 127 aa6.23□□□□□ -1.41
PDPN-209ENST00000510906 GATA2P23769 480 aaPredicted RBP6.23□□□□□ -1.41
PDPN-209ENST00000510906 NUP62P37198 522 aaPredicted RBP6.23□□□□□ -1.41
PDPN-209ENST00000510906 SNRPD3P62318 126 aaKnown RBP6.23□□□□□ -1.41
PDPN-209ENST00000510906 ANXA2RQ3ZCQ2 193 aa6.23□□□□□ -1.41
PDPN-209ENST00000510906 TMEM182Q6ZP80 229 aaPredicted RBP6.23□□□□□ -1.41
PDPN-209ENST00000510906 ACOT7LQ6ZUV0 252 aa6.23□□□□□ -1.41
PDPN-209ENST00000510906 Q8NAQ8 132 aa6.23□□□□□ -1.41
PDPN-209ENST00000510906 OR4D5Q8NGN0 318 aa6.23□□□□□ -1.41
PDPN-209ENST00000510906 COQ8AQ8NI60 647 aa6.23□□□□□ -1.41
PDPN-209ENST00000510906 C11orf45Q8TAV5 145 aa6.23□□□□□ -1.41
PDPN-209ENST00000510906 C7orf50Q9BRJ6 194 aaKnown RBP6.23□□□□□ -1.41
PDPN-209ENST00000510906 FBXL17Q9UF56 701 aa6.23□□□□□ -1.41
PDPN-209ENST00000510906 STRAPQ9Y3F4 350 aaKnown RBP6.23□□□□□ -1.41
PDPN-209ENST00000510906 ZNF705EA8MWA4 302 aaPredicted RBP6.22□□□□□ -1.41
PDPN-209ENST00000510906 H3BMM0 161 aa6.22□□□□□ -1.41
PDPN-209ENST00000510906 SOCS3O14543 225 aa6.22□□□□□ -1.41
PDPN-209ENST00000510906 SSSCA1O60232 199 aa6.22□□□□□ -1.41
PDPN-209ENST00000510906 CCNKO75909 580 aa6.22□□□□□ -1.41
PDPN-209ENST00000510906 LY6G6CO95867 125 aa6.22□□□□□ -1.41
PDPN-209ENST00000510906 IFNA21P01568 189 aa6.22□□□□□ -1.41
PDPN-209ENST00000510906 RBMY1A1P0DJD3 496 aaKnown RBP6.22□□□□□ -1.41
PDPN-209ENST00000510906 RBMY1CP0DJD4 496 aa6.22□□□□□ -1.41
PDPN-209ENST00000510906 NKX2-1P43699 371 aaPredicted RBP6.22□□□□□ -1.41
PDPN-209ENST00000510906 AKR1C1Q04828 323 aa6.22□□□□□ -1.41
PDPN-209ENST00000510906 RBMY1FQ15415 496 aaKnown RBP6.22□□□□□ -1.41
PDPN-209ENST00000510906 TMEM41BQ5BJD5 291 aa6.22□□□□□ -1.41
PDPN-209ENST00000510906 GDF5OSQ5U4N7 250 aa6.22□□□□□ -1.41
PDPN-209ENST00000510906 CSNK1G2-AS1Q8NCQ2 148 aa6.22□□□□□ -1.41
PDPN-209ENST00000510906 PPP1R14BQ96C90 147 aa6.22□□□□□ -1.41
PDPN-209ENST00000510906 LINC00052Q96N35 136 aa6.22□□□□□ -1.41
PDPN-209ENST00000510906 PSENENQ9NZ42 101 aa6.22□□□□□ -1.41
PDPN-209ENST00000510906 KLK5Q9Y337 293 aaPredicted RBP6.22□□□□□ -1.41
PDPN-209ENST00000510906 AGRNO00468 2067 aa6.22□□□□□ -1.41
PDPN-209ENST00000510906 SMCO3A2RU48 225 aa6.21□□□□□ -1.42
PDPN-209ENST00000510906 PMS2P5A8MQ11 134 aa6.21□□□□□ -1.42
PDPN-209ENST00000510906 LYRM1O43325 122 aa6.21□□□□□ -1.42
PDPN-209ENST00000510906 IGKV3-20P01619 116 aa6.21□□□□□ -1.42
PDPN-209ENST00000510906 HLA-DRB4P13762 266 aa6.21□□□□□ -1.42
PDPN-209ENST00000510906 ORM2P19652 201 aa6.21□□□□□ -1.42
PDPN-209ENST00000510906 PAX9P55771 341 aa6.21□□□□□ -1.42
PDPN-209ENST00000510906 IAH1Q2TAA2 248 aaPredicted RBP6.21□□□□□ -1.42
PDPN-209ENST00000510906 C1orf194Q5T5A4 169 aa6.21□□□□□ -1.42
PDPN-209ENST00000510906 OR8I2Q8N0Y5 310 aa6.21□□□□□ -1.42
PDPN-209ENST00000510906 ZBTB8BQ8NAP8 495 aaPredicted RBP6.21□□□□□ -1.42
PDPN-209ENST00000510906 MITD1Q8WV92 249 aa6.21□□□□□ -1.42
PDPN-209ENST00000510906 MFFQ9GZY8 342 aa6.21□□□□□ -1.42
PDPN-209ENST00000510906 C20orf85Q9H1P6 137 aa6.21□□□□□ -1.42
PDPN-209ENST00000510906 XCL2Q9UBD3 114 aa6.21□□□□□ -1.42
PDPN-209ENST00000510906 TBC1D24Q9ULP9 559 aa6.21□□□□□ -1.42
PDPN-209ENST00000510906 HLA-DRB4X5D2U9 266 aa6.21□□□□□ -1.42
PDPN-209ENST00000510906 TRAV6A0A075B6T7 132 aa6.2□□□□□ -1.42
PDPN-209ENST00000510906 ZNF98A6NK75 572 aa6.2□□□□□ -1.42
PDPN-209ENST00000510906 F6UB75 175 aa6.2□□□□□ -1.42
PDPN-209ENST00000510906 CCSO14618 274 aa6.2□□□□□ -1.42
PDPN-209ENST00000510906 SCGB1D1O95968 90 aa6.2□□□□□ -1.42
PDPN-209ENST00000510906 CFDP00746 253 aaPredicted RBP6.2□□□□□ -1.42
PDPN-209ENST00000510906 METTL15P1P0C7V9 234 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms