RNA–Protein interactions for RNA: ENST00000509552.5

CCHCR1-228, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 1 (best)

Gene CCHCR1, Length 2,304 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-228ENST00000509552 TRBV6-1A0A0K0K1D8 114 aa14.18□□□□□ -0.14
CCHCR1-228ENST00000509552 A6NNC1 897 aa14.18□□□□□ -0.14
CCHCR1-228ENST00000509552 NPIPB6E9PJ23 425 aa14.18□□□□□ -0.14
CCHCR1-228ENST00000509552 K7EQM0 130 aa14.18□□□□□ -0.14
CCHCR1-228ENST00000509552 CIARTQ8N365 385 aaPredicted RBP14.18□□□□□ -0.14
CCHCR1-228ENST00000509552 RNF125Q96EQ8 232 aa14.18□□□□□ -0.14
CCHCR1-228ENST00000509552 MSRB2Q9Y3D2 182 aa14.18□□□□□ -0.14
CCHCR1-228ENST00000509552 ABCA1O95477 2261 aa14.17□□□□□ -0.14
CCHCR1-228ENST00000509552 TRAV30A0A087WSZ9 112 aa14.17□□□□□ -0.14
CCHCR1-228ENST00000509552 IL4P05112 153 aa14.17□□□□□ -0.14
CCHCR1-228ENST00000509552 HOXB4P17483 251 aaPredicted RBP14.17□□□□□ -0.14
CCHCR1-228ENST00000509552 PRTN3P24158 256 aa14.17□□□□□ -0.14
CCHCR1-228ENST00000509552 CTRLP40313 264 aa14.17□□□□□ -0.14
CCHCR1-228ENST00000509552 UCNP55089 124 aa14.17□□□□□ -0.14
CCHCR1-228ENST00000509552 KLRB1Q12918 225 aa14.17□□□□□ -0.14
CCHCR1-228ENST00000509552 KLRD1Q13241 179 aa14.17□□□□□ -0.14
CCHCR1-228ENST00000509552 LYPD1Q8N2G4 141 aa14.17□□□□□ -0.14
CCHCR1-228ENST00000509552 ZNF491Q8N8L2 437 aa14.17□□□□□ -0.14
CCHCR1-228ENST00000509552 NEU4Q8WWR8 484 aaPredicted RBP14.17□□□□□ -0.14
CCHCR1-228ENST00000509552 FAM181BA6NEQ2 426 aa14.16□□□□□ -0.14
CCHCR1-228ENST00000509552 IGLV2-11P01706 119 aa14.16□□□□□ -0.14
CCHCR1-228ENST00000509552 CD24P25063 80 aa14.16□□□□□ -0.14
CCHCR1-228ENST00000509552 PMCHL1Q16048 86 aa14.16□□□□□ -0.14
CCHCR1-228ENST00000509552 C5orf64Q2M2E5 130 aa14.16□□□□□ -0.14
CCHCR1-228ENST00000509552 ODF3BA8MYP8 253 aa14.16□□□□□ -0.14
CCHCR1-228ENST00000509552 GNG7O60262 68 aa14.16□□□□□ -0.14
CCHCR1-228ENST00000509552 ADORA2A-AS1P86434 159 aa14.16□□□□□ -0.14
CCHCR1-228ENST00000509552 TMEM75Q8N9X5 138 aa14.16□□□□□ -0.14
CCHCR1-228ENST00000509552 CHEK1O14757 476 aa14.15□□□□□ -0.14
CCHCR1-228ENST00000509552 HLA-DRB1P01911 266 aa14.15□□□□□ -0.14
CCHCR1-228ENST00000509552 RPLP1P05386 114 aaKnown RBP14.15□□□□□ -0.14
CCHCR1-228ENST00000509552 IGLC2P0DOY2 106 aa14.15□□□□□ -0.14
CCHCR1-228ENST00000509552 KLHDC1Q8N7A1 406 aa14.15□□□□□ -0.14
CCHCR1-228ENST00000509552 ZFP30Q9Y2G7 519 aa14.15□□□□□ -0.14
CCHCR1-228ENST00000509552 FCGR2BP31994 310 aaPredicted RBP14.15□□□□□ -0.14
CCHCR1-228ENST00000509552 CDSNQ15517 529 aa14.15□□□□□ -0.14
CCHCR1-228ENST00000509552 UQCR10Q9UDW1 63 aa14.15□□□□□ -0.14
CCHCR1-228ENST00000509552 A0A1W2PRD5 423 aa14.14□□□□□ -0.15
CCHCR1-228ENST00000509552 A0A1W2PRF3 423 aa14.14□□□□□ -0.15
CCHCR1-228ENST00000509552 A0A1W2PRM7 423 aa14.14□□□□□ -0.15
CCHCR1-228ENST00000509552 BTF3P20290 206 aaKnown RBP14.14□□□□□ -0.15
CCHCR1-228ENST00000509552 MFAP4P55083 255 aa14.14□□□□□ -0.15
CCHCR1-228ENST00000509552 KLF17Q5JT82 389 aaPredicted RBP14.14□□□□□ -0.15
CCHCR1-228ENST00000509552 CCDC144NLQ6NUI1 221 aa14.14□□□□□ -0.15
CCHCR1-228ENST00000509552 SIGLEC15Q6ZMC9 328 aa14.14□□□□□ -0.15
CCHCR1-228ENST00000509552 C17orf77Q96MU5 243 aa14.14□□□□□ -0.15
CCHCR1-228ENST00000509552 SPTA1P02549 2419 aa14.14□□□□□ -0.15
CCHCR1-228ENST00000509552 ABCA4P78363 2273 aa14.14□□□□□ -0.15
CCHCR1-228ENST00000509552 WI2-2373I1.2A0A1W2PRP0 233 aa14.14□□□□□ -0.15
CCHCR1-228ENST00000509552 NPIPB5A8MRT5 1133 aa14.14□□□□□ -0.15
CCHCR1-228ENST00000509552 FOXA3P55318 350 aaPredicted RBP14.14□□□□□ -0.15
CCHCR1-228ENST00000509552 C11orf71Q6IPW1 123 aa14.14□□□□□ -0.15
CCHCR1-228ENST00000509552 HAX1O00165 279 aa14.13□□□□□ -0.15
CCHCR1-228ENST00000509552 ZNF562Q6V9R5 426 aa14.13□□□□□ -0.15
CCHCR1-228ENST00000509552 ARPC1AQ92747 370 aa14.13□□□□□ -0.15
CCHCR1-228ENST00000509552 PRR31Q5SQ13 230 aa14.13□□□□□ -0.15
CCHCR1-228ENST00000509552 IGFBPL1Q8WX77 278 aa14.13□□□□□ -0.15
CCHCR1-228ENST00000509552 CHCHD1Q96BP2 118 aaKnown RBP14.13□□□□□ -0.15
CCHCR1-228ENST00000509552 ZNF414Q96IQ9 312 aa14.13□□□□□ -0.15
CCHCR1-228ENST00000509552 PSG8Q9UQ74 426 aa14.13□□□□□ -0.15
CCHCR1-228ENST00000509552 IGLV11-55A0A075B6I3 123 aa14.12□□□□□ -0.15
CCHCR1-228ENST00000509552 NCBP2LA6PVI3 153 aaKnown RBP14.12□□□□□ -0.15
CCHCR1-228ENST00000509552 PSG3Q16557 428 aa14.12□□□□□ -0.15
CCHCR1-228ENST00000509552 EBLN2Q6P2I7 272 aa14.12□□□□□ -0.15
CCHCR1-228ENST00000509552 C16orf54Q6UWD8 224 aa14.12□□□□□ -0.15
CCHCR1-228ENST00000509552 ZC2HC1AQ96GY0 325 aa14.12□□□□□ -0.15
CCHCR1-228ENST00000509552 TXN2Q99757 166 aa14.12□□□□□ -0.15
CCHCR1-228ENST00000509552 S4R3C0 116 aa14.12□□□□□ -0.15
CCHCR1-228ENST00000509552 ZZEF1O43149 2961 aa14.12□□□□□ -0.15
CCHCR1-228ENST00000509552 IGLC3P0DOY3 106 aa14.12□□□□□ -0.15
CCHCR1-228ENST00000509552 BATFQ16520 125 aa14.12□□□□□ -0.15
CCHCR1-228ENST00000509552 Q56UQ5 140 aa14.12□□□□□ -0.15
CCHCR1-228ENST00000509552 LCN12Q6JVE5 192 aa14.12□□□□□ -0.15
CCHCR1-228ENST00000509552 C1orf122Q6ZSJ8 110 aa14.12□□□□□ -0.15
CCHCR1-228ENST00000509552 ZNF48Q96MX3 618 aaPredicted RBP14.12□□□□□ -0.15
CCHCR1-228ENST00000509552 FANCD2OSQ96PS1 177 aa14.12□□□□□ -0.15
CCHCR1-228ENST00000509552 NDFIP1Q9BT67 221 aa14.12□□□□□ -0.15
CCHCR1-228ENST00000509552 AAMDCQ9H7C9 122 aa14.12□□□□□ -0.15
CCHCR1-228ENST00000509552 THYN1Q9P016 225 aa14.12□□□□□ -0.15
CCHCR1-228ENST00000509552 RAXQ9Y2V3 346 aa14.12□□□□□ -0.15
CCHCR1-228ENST00000509552 LOC102724200A0A096LPH7 203 aaPredicted RBP14.11□□□□□ -0.15
CCHCR1-228ENST00000509552 MRPS12O15235 138 aaKnown RBP14.11□□□□□ -0.15
CCHCR1-228ENST00000509552 ATOH7Q8N100 152 aa14.11□□□□□ -0.15
CCHCR1-228ENST00000509552 URB1-AS1Q96HZ7 61 aa14.11□□□□□ -0.15
CCHCR1-228ENST00000509552 DCHS1Q96JQ0 3298 aa14.11□□□□□ -0.15
CCHCR1-228ENST00000509552 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP14.1□□□□□ -0.15
CCHCR1-228ENST00000509552 OOSP1A8MZH6 123 aa14.1□□□□□ -0.15
CCHCR1-228ENST00000509552 PDE6HQ13956 83 aa14.1□□□□□ -0.15
CCHCR1-228ENST00000509552 VMO1Q7Z5L0 202 aa14.1□□□□□ -0.15
CCHCR1-228ENST00000509552 TTC9CQ8N5M4 171 aa14.1□□□□□ -0.15
CCHCR1-228ENST00000509552 A0A1B0GUT8 65 aa14.1□□□□□ -0.15
CCHCR1-228ENST00000509552 C2orf70A6NJV1 201 aa14.1□□□□□ -0.15
CCHCR1-228ENST00000509552 Q6ZN92 141 aa14.1□□□□□ -0.15
CCHCR1-228ENST00000509552 C21orf62Q9NYP8 219 aa14.1□□□□□ -0.15
CCHCR1-228ENST00000509552 ARHGAP32A7KAX9 2087 aa14.1□□□□□ -0.15
CCHCR1-228ENST00000509552 SCGB2A1O75556 95 aa14.09□□□□□ -0.15
CCHCR1-228ENST00000509552 APOHP02749 345 aaPredicted RBP14.09□□□□□ -0.15
CCHCR1-228ENST00000509552 G0S2P27469 103 aa14.09□□□□□ -0.15
CCHCR1-228ENST00000509552 RIGQ13278 110 aa14.09□□□□□ -0.15
CCHCR1-228ENST00000509552 KIR3DL3Q8N743 410 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 115.7 ms