RNA–Protein interactions for RNA: ENST00000508573.1

SMARCA5-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

TSL 2

Gene SMARCA5, Length 363 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-202ENST00000508573 CEP162Q5TB80 1403 aa2.83□□□□□ -1.96
SMARCA5-202ENST00000508573 COL1A1P02452 1464 aaPredicted RBP2.83□□□□□ -1.96
SMARCA5-202ENST00000508573 RPRD2Q5VT52 1461 aaKnown RBP2.83□□□□□ -1.96
SMARCA5-202ENST00000508573 MAP3K1Q13233 1512 aa2.83□□□□□ -1.96
SMARCA5-202ENST00000508573 FRMPD1Q5SYB0 1578 aa2.83□□□□□ -1.96
SMARCA5-202ENST00000508573 TRPM1Q7Z4N2 1603 aa2.82□□□□□ -1.96
SMARCA5-202ENST00000508573 NCKAP5O14513 1909 aa2.82□□□□□ -1.96
SMARCA5-202ENST00000508573 TRBV24-1A0A075B6N3 115 aa2.82□□□□□ -1.96
SMARCA5-202ENST00000508573 TRGV10A0A0A0MS01 117 aa2.82□□□□□ -1.96
SMARCA5-202ENST00000508573 GEMIN2O14893 280 aaKnown RBP2.82□□□□□ -1.96
SMARCA5-202ENST00000508573 RER1O15258 196 aa2.82□□□□□ -1.96
SMARCA5-202ENST00000508573 OR1I1O60431 355 aa2.82□□□□□ -1.96
SMARCA5-202ENST00000508573 LY6HO94772 140 aa2.82□□□□□ -1.96
SMARCA5-202ENST00000508573 IGHV1-69P01742 117 aa2.82□□□□□ -1.96
SMARCA5-202ENST00000508573 ZNF19P17023 458 aa2.82□□□□□ -1.96
SMARCA5-202ENST00000508573 CLLU1Q5K131 121 aa2.82□□□□□ -1.96
SMARCA5-202ENST00000508573 LCE3AQ5TA76 89 aa2.82□□□□□ -1.96
SMARCA5-202ENST00000508573 ZNF660Q6AZW8 331 aaPredicted RBP2.82□□□□□ -1.96
SMARCA5-202ENST00000508573 MRPL54Q6P161 138 aaKnown RBP2.82□□□□□ -1.96
SMARCA5-202ENST00000508573 ZNF705AQ6ZN79 300 aaPredicted RBP2.82□□□□□ -1.96
SMARCA5-202ENST00000508573 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.82□□□□□ -1.96
SMARCA5-202ENST00000508573 BPIFB6Q8NFQ5 453 aa2.82□□□□□ -1.96
SMARCA5-202ENST00000508573 PFN4Q8NHR9 129 aa2.82□□□□□ -1.96
SMARCA5-202ENST00000508573 TYMSOSQ8TAI1 123 aa2.82□□□□□ -1.96
SMARCA5-202ENST00000508573 SCGB3A1Q96QR1 104 aa2.82□□□□□ -1.96
SMARCA5-202ENST00000508573 PKMYT1Q99640 499 aa2.82□□□□□ -1.96
SMARCA5-202ENST00000508573 SEC11CQ9BY50 192 aa2.82□□□□□ -1.96
SMARCA5-202ENST00000508573 AGPAT4-IT1Q9H0P7 198 aa2.82□□□□□ -1.96
SMARCA5-202ENST00000508573 CHCHD2Q9Y6H1 151 aaPredicted RBP2.82□□□□□ -1.96
SMARCA5-202ENST00000508573 U3KQK5 164 aa2.82□□□□□ -1.96
SMARCA5-202ENST00000508573 SVILO95425 2214 aa2.82□□□□□ -1.96
SMARCA5-202ENST00000508573 NRKQ7Z2Y5 1582 aa2.82□□□□□ -1.96
SMARCA5-202ENST00000508573 SIPA1L1O43166 1804 aa2.82□□□□□ -1.96
SMARCA5-202ENST00000508573 AKAP11Q9UKA4 1901 aa2.81□□□□□ -1.96
SMARCA5-202ENST00000508573 TRBV20-1A0A075B6N2 111 aa2.81□□□□□ -1.96
SMARCA5-202ENST00000508573 IGKV1OR2-108A0A075B7D4 117 aa2.81□□□□□ -1.96
SMARCA5-202ENST00000508573 PNMA8CA0A1B0GUJ8 204 aa2.81□□□□□ -1.96
SMARCA5-202ENST00000508573 NDUFAF8A1L188 74 aa2.81□□□□□ -1.96
SMARCA5-202ENST00000508573 A8MUU9 505 aa2.81□□□□□ -1.96
SMARCA5-202ENST00000508573 PHOX2AO14813 284 aa2.81□□□□□ -1.96
SMARCA5-202ENST00000508573 CD3DP04234 171 aa2.81□□□□□ -1.96
SMARCA5-202ENST00000508573 IFITM1P13164 125 aa2.81□□□□□ -1.96
SMARCA5-202ENST00000508573 FXYD7P58549 80 aa2.81□□□□□ -1.96
SMARCA5-202ENST00000508573 DSCR10P59022 87 aa2.81□□□□□ -1.96
SMARCA5-202ENST00000508573 ZNF90Q03938 601 aa2.81□□□□□ -1.96
SMARCA5-202ENST00000508573 EIF5AL1Q6IS14 154 aaKnown RBP2.81□□□□□ -1.96
SMARCA5-202ENST00000508573 ZNF322Q6U7Q0 402 aaPredicted RBP2.81□□□□□ -1.96
SMARCA5-202ENST00000508573 SDIM1Q6ZPB5 146 aa2.81□□□□□ -1.96
SMARCA5-202ENST00000508573 Q6ZUT4 128 aa2.81□□□□□ -1.96
SMARCA5-202ENST00000508573 ATOH7Q8N100 152 aa2.81□□□□□ -1.96
SMARCA5-202ENST00000508573 Q8N2B8 174 aa2.81□□□□□ -1.96
SMARCA5-202ENST00000508573 KCNRGQ8N5I3 272 aa2.81□□□□□ -1.96
SMARCA5-202ENST00000508573 MIR7-3HGQ8N6C7 128 aa2.81□□□□□ -1.96
SMARCA5-202ENST00000508573 SLC35B3Q9H1N7 401 aa2.81□□□□□ -1.96
SMARCA5-202ENST00000508573 ZNF355PQ9NSJ1 428 aa2.81□□□□□ -1.96
SMARCA5-202ENST00000508573 ICOSQ9Y6W8 199 aa2.81□□□□□ -1.96
SMARCA5-202ENST00000508573 NSD3Q9BZ95 1437 aa2.81□□□□□ -1.96
SMARCA5-202ENST00000508573 MAPKBP1O60336 1514 aa2.81□□□□□ -1.96
SMARCA5-202ENST00000508573 ADGRB1O14514 1584 aa2.81□□□□□ -1.96
SMARCA5-202ENST00000508573 RIMBP3CA6NJZ7 1639 aa2.81□□□□□ -1.96
SMARCA5-202ENST00000508573 RIMBP3BA6NNM3 1639 aa2.81□□□□□ -1.96
SMARCA5-202ENST00000508573 RIMBP3Q9UFD9 1639 aa2.81□□□□□ -1.96
SMARCA5-202ENST00000508573 ZNF646O15015 1829 aaPredicted RBP2.81□□□□□ -1.96
SMARCA5-202ENST00000508573 EML6Q6ZMW3 1958 aa2.81□□□□□ -1.96
SMARCA5-202ENST00000508573 ZNF638Q14966 1978 aaKnown RBP2.8□□□□□ -1.96
SMARCA5-202ENST00000508573 LRP4O75096 1905 aa2.8□□□□□ -1.96
SMARCA5-202ENST00000508573 GLI3P10071 1580 aa2.8□□□□□ -1.96
SMARCA5-202ENST00000508573 KDM5DQ9BY66 1539 aa2.8□□□□□ -1.96
SMARCA5-202ENST00000508573 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.8□□□□□ -1.96
SMARCA5-202ENST00000508573 FAM168BA1KXE4 195 aa2.8□□□□□ -1.96
SMARCA5-202ENST00000508573 C17orf51A8MQB3 221 aa2.8□□□□□ -1.96
SMARCA5-202ENST00000508573 NPYP01303 97 aa2.8□□□□□ -1.96
SMARCA5-202ENST00000508573 RPS10P46783 165 aaKnown RBP2.8□□□□□ -1.96
SMARCA5-202ENST00000508573 UBA52P62987 128 aaKnown RBP2.8□□□□□ -1.96
SMARCA5-202ENST00000508573 DYNLT1P63172 113 aa2.8□□□□□ -1.96
SMARCA5-202ENST00000508573 SUPT4H1P63272 117 aaKnown RBP2.8□□□□□ -1.96
SMARCA5-202ENST00000508573 EBI3Q14213 229 aa2.8□□□□□ -1.96
SMARCA5-202ENST00000508573 LCE3EQ5T5B0 92 aa2.8□□□□□ -1.96
SMARCA5-202ENST00000508573 C9orf153Q5TBE3 101 aa2.8□□□□□ -1.96
SMARCA5-202ENST00000508573 C2orf91Q6ZV80 131 aa2.8□□□□□ -1.96
SMARCA5-202ENST00000508573 LCN9Q8WX39 176 aa2.8□□□□□ -1.96
SMARCA5-202ENST00000508573 LSM10Q969L4 123 aaKnown RBP2.8□□□□□ -1.96
SMARCA5-202ENST00000508573 LINC00526Q96FQ7 95 aa2.8□□□□□ -1.96
SMARCA5-202ENST00000508573 NAA60Q9H7X0 242 aa2.8□□□□□ -1.96
SMARCA5-202ENST00000508573 RPS10P5Q9NQ39 176 aa2.8□□□□□ -1.96
SMARCA5-202ENST00000508573 FKBP11Q9NYL4 201 aa2.8□□□□□ -1.96
SMARCA5-202ENST00000508573 HCFC1P51610 2035 aa2.8□□□□□ -1.96
SMARCA5-202ENST00000508573 BAZ1AQ9NRL2 1556 aaPredicted RBP2.79□□□□□ -1.96
SMARCA5-202ENST00000508573 NISCHQ9Y2I1 1504 aa2.79□□□□□ -1.96
SMARCA5-202ENST00000508573 CFTRP13569 1480 aa2.79□□□□□ -1.96
SMARCA5-202ENST00000508573 KTN1Q86UP2 1357 aaKnown RBP2.79□□□□□ -1.96
SMARCA5-202ENST00000508573 IGKV1D-37A0A075B6S9 117 aa2.79□□□□□ -1.96
SMARCA5-202ENST00000508573 H3BT86 120 aa2.79□□□□□ -1.96
SMARCA5-202ENST00000508573 LHBP01229 141 aa2.79□□□□□ -1.96
SMARCA5-202ENST00000508573 AKR1C1Q04828 323 aa2.79□□□□□ -1.96
SMARCA5-202ENST00000508573 CDK5R1Q15078 307 aa2.79□□□□□ -1.96
SMARCA5-202ENST00000508573 MIAQ16674 131 aa2.79□□□□□ -1.96
SMARCA5-202ENST00000508573 FAM229BQ4G0N7 80 aa2.79□□□□□ -1.96
SMARCA5-202ENST00000508573 Q56UQ5 140 aa2.79□□□□□ -1.96
SMARCA5-202ENST00000508573 Q6AWC8 147 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 119.6 ms