RNA–Protein interactions for RNA: ENST00000508171.5

LIN54-207, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best)

Gene LIN54, Length 2,684 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-207ENST00000508171 HES1Q14469 280 aa8.63□□□□□ -1.03
LIN54-207ENST00000508171 PRNTQ86SH4 94 aa8.63□□□□□ -1.03
LIN54-207ENST00000508171 OR11H6Q8NGC7 330 aa8.63□□□□□ -1.03
LIN54-207ENST00000508171 SMIM12Q96EX1 92 aa8.63□□□□□ -1.03
LIN54-207ENST00000508171 RAB1BQ9H0U4 201 aa8.63□□□□□ -1.03
LIN54-207ENST00000508171 CELSR1Q9NYQ6 3014 aa8.63□□□□□ -1.03
LIN54-207ENST00000508171 VPS13CQ709C8 3753 aa8.62□□□□□ -1.03
LIN54-207ENST00000508171 CACNA1BQ00975 2339 aa8.62□□□□□ -1.03
LIN54-207ENST00000508171 A8MWL6 223 aa8.62□□□□□ -1.03
LIN54-207ENST00000508171 FOXA3P55318 350 aaPredicted RBP8.62□□□□□ -1.03
LIN54-207ENST00000508171 LCN12Q6JVE5 192 aa8.62□□□□□ -1.03
LIN54-207ENST00000508171 ZNF491Q8N8L2 437 aa8.62□□□□□ -1.03
LIN54-207ENST00000508171 RBM14Q96PK6 669 aaKnown RBP8.62□□□□□ -1.03
LIN54-207ENST00000508171 OTORQ9NRC9 128 aa8.62□□□□□ -1.03
LIN54-207ENST00000508171 TMEM14CQ9P0S9 112 aa8.62□□□□□ -1.03
LIN54-207ENST00000508171 ZNF785A8K8V0 405 aa8.62□□□□□ -1.03
LIN54-207ENST00000508171 SSTP61278 116 aa8.62□□□□□ -1.03
LIN54-207ENST00000508171 ATOH7Q8N100 152 aa8.62□□□□□ -1.03
LIN54-207ENST00000508171 DYNAPQ8N1N2 210 aa8.62□□□□□ -1.03
LIN54-207ENST00000508171 DAZAP1Q96EP5 407 aaKnown RBP8.62□□□□□ -1.03
LIN54-207ENST00000508171 LOC105371242A0A075B767 164 aa8.61□□□□□ -1.03
LIN54-207ENST00000508171 M0QZ24 198 aa8.61□□□□□ -1.03
LIN54-207ENST00000508171 HSBP1O75506 76 aa8.61□□□□□ -1.03
LIN54-207ENST00000508171 OR2J3O76001 311 aa8.61□□□□□ -1.03
LIN54-207ENST00000508171 HBBP68871 147 aa8.61□□□□□ -1.03
LIN54-207ENST00000508171 RNASEKQ6P5S7 137 aaKnown RBP8.61□□□□□ -1.03
LIN54-207ENST00000508171 ATP5L2Q7Z4Y8 100 aa8.61□□□□□ -1.03
LIN54-207ENST00000508171 Q86TA4 180 aa8.61□□□□□ -1.03
LIN54-207ENST00000508171 HIVEP3Q5T1R4 2406 aa8.61□□□□□ -1.03
LIN54-207ENST00000508171 TCAPO15273 167 aa8.61□□□□□ -1.03
LIN54-207ENST00000508171 IL4P05112 153 aa8.61□□□□□ -1.03
LIN54-207ENST00000508171 COL8A1P27658 744 aa8.61□□□□□ -1.03
LIN54-207ENST00000508171 KLF5Q13887 457 aaPredicted RBP8.61□□□□□ -1.03
LIN54-207ENST00000508171 MAJINQ3KP22 176 aa8.61□□□□□ -1.03
LIN54-207ENST00000508171 BORCS7Q96B45 105 aa8.61□□□□□ -1.03
LIN54-207ENST00000508171 TIMD4Q96H15 378 aa8.61□□□□□ -1.03
LIN54-207ENST00000508171 URB1-AS1Q96HZ7 61 aa8.61□□□□□ -1.03
LIN54-207ENST00000508171 SHANK2-AS3Q9BTD1 123 aa8.61□□□□□ -1.03
LIN54-207ENST00000508171 MSRB2Q9Y3D2 182 aa8.61□□□□□ -1.03
LIN54-207ENST00000508171 TRBV19A0A075B6N1 114 aa8.6□□□□□ -1.03
LIN54-207ENST00000508171 FCGR2BP31994 310 aaPredicted RBP8.6□□□□□ -1.03
LIN54-207ENST00000508171 CTRLP40313 264 aa8.6□□□□□ -1.03
LIN54-207ENST00000508171 ZNF124Q15973 351 aa8.6□□□□□ -1.03
LIN54-207ENST00000508171 PMCHL1Q16048 86 aa8.6□□□□□ -1.03
LIN54-207ENST00000508171 SPATA45Q537H7 98 aa8.6□□□□□ -1.03
LIN54-207ENST00000508171 NPBQ8NG41 125 aa8.6□□□□□ -1.03
LIN54-207ENST00000508171 RNF125Q96EQ8 232 aa8.6□□□□□ -1.03
LIN54-207ENST00000508171 ZNF492Q9P255 531 aa8.6□□□□□ -1.03
LIN54-207ENST00000508171 CHD8Q9HCK8 2581 aa8.6□□□□□ -1.03
LIN54-207ENST00000508171 NCOR2Q9Y618 2525 aa8.6□□□□□ -1.03
LIN54-207ENST00000508171 COL12A1Q99715 3063 aa8.6□□□□□ -1.03
LIN54-207ENST00000508171 SH2D7A6NKC9 451 aaPredicted RBP8.6□□□□□ -1.03
LIN54-207ENST00000508171 M0R2Z0 102 aa8.6□□□□□ -1.03
LIN54-207ENST00000508171 NDUFA3O95167 84 aa8.6□□□□□ -1.03
LIN54-207ENST00000508171 IGLC2P0DOY2 106 aa8.6□□□□□ -1.03
LIN54-207ENST00000508171 EBLN2Q6P2I7 272 aa8.6□□□□□ -1.03
LIN54-207ENST00000508171 BPIFA4PQ86YQ2 179 aa8.6□□□□□ -1.03
LIN54-207ENST00000508171 OR4B1Q8NGF8 309 aa8.6□□□□□ -1.03
LIN54-207ENST00000508171 FANCD2OSQ96PS1 177 aa8.6□□□□□ -1.03
LIN54-207ENST00000508171 SRSF8Q9BRL6 282 aaKnown RBP8.6□□□□□ -1.03
LIN54-207ENST00000508171 NCBP2LA6PVI3 153 aaKnown RBP8.59□□□□□ -1.03
LIN54-207ENST00000508171 ODF3BA8MYP8 253 aa8.59□□□□□ -1.03
LIN54-207ENST00000508171 H3BRN7 92 aa8.59□□□□□ -1.03
LIN54-207ENST00000508171 IGHV3-23P01764 117 aa8.59□□□□□ -1.03
LIN54-207ENST00000508171 PRTN3P24158 256 aa8.59□□□□□ -1.03
LIN54-207ENST00000508171 CEACAM3P40198 252 aa8.59□□□□□ -1.03
LIN54-207ENST00000508171 NDPQ00604 133 aa8.59□□□□□ -1.03
LIN54-207ENST00000508171 C5orf64Q2M2E5 130 aa8.59□□□□□ -1.03
LIN54-207ENST00000508171 CT83Q5H943 113 aa8.59□□□□□ -1.03
LIN54-207ENST00000508171 C11orf71Q6IPW1 123 aa8.59□□□□□ -1.03
LIN54-207ENST00000508171 RBPMS2Q6ZRY4 209 aaKnown RBP8.59□□□□□ -1.03
LIN54-207ENST00000508171 ZC2HC1AQ96GY0 325 aa8.59□□□□□ -1.03
LIN54-207ENST00000508171 FAM181BA6NEQ2 426 aa8.59□□□□□ -1.03
LIN54-207ENST00000508171 NPIPB6E9PJ23 425 aa8.59□□□□□ -1.03
LIN54-207ENST00000508171 M0R3E3 92 aa8.59□□□□□ -1.03
LIN54-207ENST00000508171 NDUFS7O75251 213 aa8.59□□□□□ -1.03
LIN54-207ENST00000508171 HOXB4P17483 251 aaPredicted RBP8.59□□□□□ -1.03
LIN54-207ENST00000508171 SIGLEC15Q6ZMC9 328 aa8.59□□□□□ -1.03
LIN54-207ENST00000508171 OVOL3O00110 214 aa8.58□□□□□ -1.04
LIN54-207ENST00000508171 MRPS12O15235 138 aaKnown RBP8.58□□□□□ -1.04
LIN54-207ENST00000508171 GNG7O60262 68 aa8.58□□□□□ -1.04
LIN54-207ENST00000508171 ZFP36P26651 326 aaKnown RBP8.58□□□□□ -1.04
LIN54-207ENST00000508171 KLRB1Q12918 225 aa8.58□□□□□ -1.04
LIN54-207ENST00000508171 BATFQ16520 125 aa8.58□□□□□ -1.04
LIN54-207ENST00000508171 OR4F17Q8NGA8 305 aa8.58□□□□□ -1.04
LIN54-207ENST00000508171 ZNF414Q96IQ9 312 aa8.58□□□□□ -1.04
LIN54-207ENST00000508171 A0A1W2PPR1 153 aa8.58□□□□□ -1.04
LIN54-207ENST00000508171 WI2-2373I1.2A0A1W2PRP0 233 aa8.58□□□□□ -1.04
LIN54-207ENST00000508171 F8W735 103 aaPredicted RBP8.58□□□□□ -1.04
LIN54-207ENST00000508171 M0R1W7 72 aa8.58□□□□□ -1.04
LIN54-207ENST00000508171 HLA-DRB1P01911 266 aa8.58□□□□□ -1.04
LIN54-207ENST00000508171 G0S2P27469 103 aa8.58□□□□□ -1.04
LIN54-207ENST00000508171 VMO1Q7Z5L0 202 aa8.58□□□□□ -1.04
LIN54-207ENST00000508171 GFRA4Q9GZZ7 299 aa8.58□□□□□ -1.04
LIN54-207ENST00000508171 CLEC5AQ9NY25 188 aa8.58□□□□□ -1.04
LIN54-207ENST00000508171 IGLV11-55A0A075B6I3 123 aa8.57□□□□□ -1.04
LIN54-207ENST00000508171 C2orf70A6NJV1 201 aa8.57□□□□□ -1.04
LIN54-207ENST00000508171 APOHP02749 345 aaPredicted RBP8.57□□□□□ -1.04
LIN54-207ENST00000508171 CRIP1P50238 77 aa8.57□□□□□ -1.04
LIN54-207ENST00000508171 ZNF138P52744 262 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms