RNA–Protein interactions for RNA: ENST00000508037.1

HMGB3P16-201, Transcript of high mobility group box 3 pseudogene 16, humanhuman

BASIC

Gene HMGB3P16, Length 287 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P16-201ENST00000508037 C17orf100A8MU93 164 aa3.95□□□□□ -1.78
HMGB3P16-201ENST00000508037 VWC2LB2RUY7 222 aa3.95□□□□□ -1.78
HMGB3P16-201ENST00000508037 H0Y8G0 127 aa3.95□□□□□ -1.78
HMGB3P16-201ENST00000508037 TMEM178BH3BS89 294 aa3.95□□□□□ -1.78
HMGB3P16-201ENST00000508037 J3QR89 54 aa3.95□□□□□ -1.78
HMGB3P16-201ENST00000508037 K7EP34 96 aa3.95□□□□□ -1.78
HMGB3P16-201ENST00000508037 ENSAO43768 121 aaKnown RBP3.95□□□□□ -1.78
HMGB3P16-201ENST00000508037 HBDP02042 147 aa3.95□□□□□ -1.78
HMGB3P16-201ENST00000508037 CD40P25942 277 aa3.95□□□□□ -1.78
HMGB3P16-201ENST00000508037 APOBEC3AP31941 199 aaPredicted RBP3.95□□□□□ -1.78
HMGB3P16-201ENST00000508037 BMI1P35226 326 aa3.95□□□□□ -1.78
HMGB3P16-201ENST00000508037 PSG3Q16557 428 aa3.95□□□□□ -1.78
HMGB3P16-201ENST00000508037 LPAL2Q16609 132 aa3.95□□□□□ -1.78
HMGB3P16-201ENST00000508037 SPRNQ5BIV9 151 aa3.95□□□□□ -1.78
HMGB3P16-201ENST00000508037 FAM201AQ5SY85 155 aa3.95□□□□□ -1.78
HMGB3P16-201ENST00000508037 UTF1Q5T230 341 aa3.95□□□□□ -1.78
HMGB3P16-201ENST00000508037 ATP1A1-AS1Q5TC04 95 aa3.95□□□□□ -1.78
HMGB3P16-201ENST00000508037 ZNF474Q6S9Z5 364 aaPredicted RBP3.95□□□□□ -1.78
HMGB3P16-201ENST00000508037 DHRS13Q6UX07 377 aa3.95□□□□□ -1.78
HMGB3P16-201ENST00000508037 LINC00322Q6ZN03 302 aaPredicted RBP3.95□□□□□ -1.78
HMGB3P16-201ENST00000508037 Q6ZVH6 145 aa3.95□□□□□ -1.78
HMGB3P16-201ENST00000508037 BOD1L2Q8IYS8 172 aa3.95□□□□□ -1.78
HMGB3P16-201ENST00000508037 ORMDL3Q8N138 153 aa3.95□□□□□ -1.78
HMGB3P16-201ENST00000508037 OR2K2Q8NGT1 345 aa3.95□□□□□ -1.78
HMGB3P16-201ENST00000508037 PIFOQ8TCI5 191 aa3.95□□□□□ -1.78
HMGB3P16-201ENST00000508037 ZNF414Q96IQ9 312 aa3.95□□□□□ -1.78
HMGB3P16-201ENST00000508037 PRELID3AQ96N28 172 aa3.95□□□□□ -1.78
HMGB3P16-201ENST00000508037 SHANK2-AS3Q9BTD1 123 aa3.95□□□□□ -1.78
HMGB3P16-201ENST00000508037 CSTL1Q9H114 145 aa3.95□□□□□ -1.78
HMGB3P16-201ENST00000508037 JKAMPQ9P055 326 aa3.95□□□□□ -1.78
HMGB3P16-201ENST00000508037 KAAG1Q9UBP8 84 aa3.95□□□□□ -1.78
HMGB3P16-201ENST00000508037 SMPXQ9UHP9 88 aa3.95□□□□□ -1.78
HMGB3P16-201ENST00000508037 RABAC1Q9UI14 185 aa3.95□□□□□ -1.78
HMGB3P16-201ENST00000508037 PSG8Q9UQ74 426 aa3.95□□□□□ -1.78
HMGB3P16-201ENST00000508037 TRAV8-6A0A0B4J262 113 aa3.94□□□□□ -1.78
HMGB3P16-201ENST00000508037 A0A0G2JLM5 398 aa3.94□□□□□ -1.78
HMGB3P16-201ENST00000508037 E7EUB6 86 aa3.94□□□□□ -1.78
HMGB3P16-201ENST00000508037 H3BRN7 92 aa3.94□□□□□ -1.78
HMGB3P16-201ENST00000508037 M0QZ24 198 aa3.94□□□□□ -1.78
HMGB3P16-201ENST00000508037 IGLV2-11P01706 119 aa3.94□□□□□ -1.78
HMGB3P16-201ENST00000508037 RBP4P02753 201 aa3.94□□□□□ -1.78
HMGB3P16-201ENST00000508037 CRYGBP07316 175 aa3.94□□□□□ -1.78
HMGB3P16-201ENST00000508037 CSN3P07498 182 aa3.94□□□□□ -1.78
HMGB3P16-201ENST00000508037 ARMS2P0C7Q2 107 aa3.94□□□□□ -1.78
HMGB3P16-201ENST00000508037 SMIM13P0DJ93 91 aa3.94□□□□□ -1.78
HMGB3P16-201ENST00000508037 IGHV1-8P0DP01 117 aa3.94□□□□□ -1.78
HMGB3P16-201ENST00000508037 SCGB1A1P11684 91 aa3.94□□□□□ -1.78
HMGB3P16-201ENST00000508037 FABP2P12104 132 aa3.94□□□□□ -1.78
HMGB3P16-201ENST00000508037 HLA-DRB4P13762 266 aa3.94□□□□□ -1.78
HMGB3P16-201ENST00000508037 CCL3L1P16619 93 aa3.94□□□□□ -1.78
HMGB3P16-201ENST00000508037 SRSF2Q01130 221 aaKnown RBP3.94□□□□□ -1.78
HMGB3P16-201ENST00000508037 TMEM155Q4W5P6 130 aa3.94□□□□□ -1.78
HMGB3P16-201ENST00000508037 C10orf55Q5SWW7 151 aa3.94□□□□□ -1.78
HMGB3P16-201ENST00000508037 FAM104BQ5XKR9 115 aa3.94□□□□□ -1.78
HMGB3P16-201ENST00000508037 HCP5Q6MZN7 132 aa3.94□□□□□ -1.78
HMGB3P16-201ENST00000508037 UFSP1Q6NVU6 142 aa3.94□□□□□ -1.78
HMGB3P16-201ENST00000508037 DUX4L9Q6RFH8 374 aaPredicted RBP3.94□□□□□ -1.78
HMGB3P16-201ENST00000508037 LINC00173Q6ZV60 143 aa3.94□□□□□ -1.78
HMGB3P16-201ENST00000508037 C2orf91Q6ZV80 131 aa3.94□□□□□ -1.78
HMGB3P16-201ENST00000508037 COX8CQ7Z4L0 72 aa3.94□□□□□ -1.78
HMGB3P16-201ENST00000508037 PPP1R27Q86WC6 154 aa3.94□□□□□ -1.78
HMGB3P16-201ENST00000508037 FER1L6-AS1Q8NA97 138 aa3.94□□□□□ -1.78
HMGB3P16-201ENST00000508037 FDCSPQ8NFU4 85 aa3.94□□□□□ -1.78
HMGB3P16-201ENST00000508037 OR8A1Q8NGG7 326 aa3.94□□□□□ -1.78
HMGB3P16-201ENST00000508037 ZC2HC1AQ96GY0 325 aa3.94□□□□□ -1.78
HMGB3P16-201ENST00000508037 SGK494Q96LW2 274 aa3.94□□□□□ -1.78
HMGB3P16-201ENST00000508037 TMEM133Q9H2Q1 129 aa3.94□□□□□ -1.78
HMGB3P16-201ENST00000508037 NXT2Q9NPJ8 142 aaKnown RBP3.94□□□□□ -1.78
HMGB3P16-201ENST00000508037 HIGD1BQ9P298 99 aa3.94□□□□□ -1.78
HMGB3P16-201ENST00000508037 SIGLEC9Q9Y336 463 aa3.94□□□□□ -1.78
HMGB3P16-201ENST00000508037 HLA-DRB4X5D2U9 266 aa3.94□□□□□ -1.78
HMGB3P16-201ENST00000508037 DOCK7Q96N67 2140 aa3.94□□□□□ -1.78
HMGB3P16-201ENST00000508037 C5orf42Q9H799 3197 aa3.94□□□□□ -1.78
HMGB3P16-201ENST00000508037 TANC2Q9HCD6 1990 aa3.93□□□□□ -1.78
HMGB3P16-201ENST00000508037 A0A1W2PPM0 123 aa3.93□□□□□ -1.78
HMGB3P16-201ENST00000508037 D6R8Y8 96 aa3.93□□□□□ -1.78
HMGB3P16-201ENST00000508037 G3V4G9 280 aa3.93□□□□□ -1.78
HMGB3P16-201ENST00000508037 C16orf97H3BN30 126 aa3.93□□□□□ -1.78
HMGB3P16-201ENST00000508037 NKX2-8O15522 239 aa3.93□□□□□ -1.78
HMGB3P16-201ENST00000508037 ZNF207O43670 478 aaKnown RBP3.93□□□□□ -1.78
HMGB3P16-201ENST00000508037 CEACAM4O75871 244 aa3.93□□□□□ -1.78
HMGB3P16-201ENST00000508037 ATP5LO75964 103 aa3.93□□□□□ -1.78
HMGB3P16-201ENST00000508037 IGHV3-48P01763 117 aa3.93□□□□□ -1.78
HMGB3P16-201ENST00000508037 FGF6P10767 208 aa3.93□□□□□ -1.78
HMGB3P16-201ENST00000508037 RPL7P18124 248 aaKnown RBP3.93□□□□□ -1.78
HMGB3P16-201ENST00000508037 CKS2P33552 79 aa3.93□□□□□ -1.78
HMGB3P16-201ENST00000508037 ZNF138P52744 262 aa3.93□□□□□ -1.78
HMGB3P16-201ENST00000508037 DLX6P56179 175 aa3.93□□□□□ -1.78
HMGB3P16-201ENST00000508037 CCL8P80075 99 aa3.93□□□□□ -1.78
HMGB3P16-201ENST00000508037 SRSF1Q07955 248 aaKnown RBP eCLIP3.93□□□□□ -1.78
HMGB3P16-201ENST00000508037 KIR3DS1Q14943 382 aa3.93□□□□□ -1.78
HMGB3P16-201ENST00000508037 IGFL3Q6UXB1 125 aa3.93□□□□□ -1.78
HMGB3P16-201ENST00000508037 SIGLEC15Q6ZMC9 328 aa3.93□□□□□ -1.78
HMGB3P16-201ENST00000508037 SEM1Q6ZVN7 128 aa3.93□□□□□ -1.78
HMGB3P16-201ENST00000508037 IFI27L1Q96BM0 104 aa3.93□□□□□ -1.78
HMGB3P16-201ENST00000508037 ZNF48Q96MX3 618 aaPredicted RBP3.93□□□□□ -1.78
HMGB3P16-201ENST00000508037 MEGF9Q9H1U4 602 aa3.93□□□□□ -1.78
HMGB3P16-201ENST00000508037 PRO3102Q9H379 93 aa3.93□□□□□ -1.78
HMGB3P16-201ENST00000508037 MAP1LC3AQ9H492 121 aa3.93□□□□□ -1.78
HMGB3P16-201ENST00000508037 DYNLRB1Q9NP97 96 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms