RNA–Protein interactions for RNA: ENST00000507449.1

LSM6-205, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM6, Length 371 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-205ENST00000507449 PHBP35232 272 aa0.66□□□□□ -2.3
LSM6-205ENST00000507449 LCN6P62502 163 aa0.66□□□□□ -2.3
LSM6-205ENST00000507449 PSG9Q00887 426 aa0.66□□□□□ -2.3
LSM6-205ENST00000507449 MYL5Q02045 173 aa0.66□□□□□ -2.3
LSM6-205ENST00000507449 C4orf22Q6V702 233 aa0.66□□□□□ -2.3
LSM6-205ENST00000507449 LINC00322Q6ZN03 302 aaPredicted RBP0.66□□□□□ -2.3
LSM6-205ENST00000507449 GRINAQ7Z429 371 aa0.66□□□□□ -2.3
LSM6-205ENST00000507449 LYG2Q86SG7 212 aa0.66□□□□□ -2.3
LSM6-205ENST00000507449 ZHX1-C8orf76Q96EF9 292 aa0.66□□□□□ -2.3
LSM6-205ENST00000507449 LYSMD1Q96S90 227 aa0.66□□□□□ -2.3
LSM6-205ENST00000507449 GPX7Q96SL4 187 aaPredicted RBP0.66□□□□□ -2.3
LSM6-205ENST00000507449 GINS3Q9BRX5 216 aa0.66□□□□□ -2.3
LSM6-205ENST00000507449 GGACTQ9BVM4 153 aa0.66□□□□□ -2.3
LSM6-205ENST00000507449 SH3BGRL3Q9H299 93 aa0.66□□□□□ -2.3
LSM6-205ENST00000507449 LYRM2Q9NU23 88 aaPredicted RBP0.66□□□□□ -2.3
LSM6-205ENST00000507449 ORMDL1Q9P0S3 153 aa0.66□□□□□ -2.3
LSM6-205ENST00000507449 TNRC6AQ8NDV7 1962 aaKnown RBP0.66□□□□□ -2.3
LSM6-205ENST00000507449 SCN3AQ9NY46 2000 aa0.65□□□□□ -2.3
LSM6-205ENST00000507449 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.65□□□□□ -2.31
LSM6-205ENST00000507449 MFSD11O43934 449 aa0.65□□□□□ -2.31
LSM6-205ENST00000507449 IFNA1P01562 189 aa0.65□□□□□ -2.31
LSM6-205ENST00000507449 TRGC2P03986 189 aa0.65□□□□□ -2.31
LSM6-205ENST00000507449 ARPP19P56211 112 aa0.65□□□□□ -2.31
LSM6-205ENST00000507449 RPL19P84098 196 aaKnown RBP0.65□□□□□ -2.31
LSM6-205ENST00000507449 SNCBQ16143 134 aa0.65□□□□□ -2.31
LSM6-205ENST00000507449 AKR1C8PQ5T2L2 129 aa0.65□□□□□ -2.31
LSM6-205ENST00000507449 C2orf82Q6UX34 121 aa0.65□□□□□ -2.31
LSM6-205ENST00000507449 SMIM20Q8N5G0 67 aa0.65□□□□□ -2.31
LSM6-205ENST00000507449 AP3S1Q92572 193 aa0.65□□□□□ -2.31
LSM6-205ENST00000507449 OR2J1Q9GZK6 312 aa0.65□□□□□ -2.31
LSM6-205ENST00000507449 SSR3Q9UNL2 185 aa0.65□□□□□ -2.31
LSM6-205ENST00000507449 EIF3AQ14152 1382 aaKnown RBP0.65□□□□□ -2.31
LSM6-205ENST00000507449 RFX7Q2KHR2 1363 aa0.65□□□□□ -2.31
LSM6-205ENST00000507449 E9PCH4 1651 aa0.65□□□□□ -2.31
LSM6-205ENST00000507449 NOTCH1P46531 2555 aa0.64□□□□□ -2.31
LSM6-205ENST00000507449 ODAMA1E959 279 aa0.64□□□□□ -2.31
LSM6-205ENST00000507449 K7ERJ3 54 aa0.64□□□□□ -2.31
LSM6-205ENST00000507449 AIPO00170 330 aa0.64□□□□□ -2.31
LSM6-205ENST00000507449 ERC2-IT1O76042 136 aa0.64□□□□□ -2.31
LSM6-205ENST00000507449 EFNA4P52798 201 aa0.64□□□□□ -2.31
LSM6-205ENST00000507449 TMBIM6P55061 237 aa0.64□□□□□ -2.31
LSM6-205ENST00000507449 GNG3P63215 75 aa0.64□□□□□ -2.31
LSM6-205ENST00000507449 CDK6Q00534 326 aa0.64□□□□□ -2.31
LSM6-205ENST00000507449 MSMO1Q15800 293 aa0.64□□□□□ -2.31
LSM6-205ENST00000507449 OR5D16Q8NGK9 328 aa0.64□□□□□ -2.31
LSM6-205ENST00000507449 RAB37Q96AX2 223 aa0.64□□□□□ -2.31
LSM6-205ENST00000507449 CHCHD1Q96BP2 118 aaKnown RBP0.64□□□□□ -2.31
LSM6-205ENST00000507449 CCDC94Q9BW85 323 aaPredicted RBP0.64□□□□□ -2.31
LSM6-205ENST00000507449 TMEM14CQ9P0S9 112 aa0.64□□□□□ -2.31
LSM6-205ENST00000507449 CECR2Q9BXF3 1484 aa0.63□□□□□ -2.31
LSM6-205ENST00000507449 RIIAD1A6NNX1 92 aa0.63□□□□□ -2.31
LSM6-205ENST00000507449 TMEM238C9JI98 176 aa0.63□□□□□ -2.31
LSM6-205ENST00000507449 C17orf112F2Z3M2 114 aa0.63□□□□□ -2.31
LSM6-205ENST00000507449 M0R233 179 aa0.63□□□□□ -2.31
LSM6-205ENST00000507449 CSN2P05814 226 aa0.63□□□□□ -2.31
LSM6-205ENST00000507449 OR10J4P0C629 311 aa0.63□□□□□ -2.31
LSM6-205ENST00000507449 SCGB2B2Q4G0G5 96 aa0.63□□□□□ -2.31
LSM6-205ENST00000507449 TMEM14EPQ6UXP3 125 aa0.63□□□□□ -2.31
LSM6-205ENST00000507449 OR4K15Q8NH41 348 aa0.63□□□□□ -2.31
LSM6-205ENST00000507449 ZC2HC1AQ96GY0 325 aa0.63□□□□□ -2.31
LSM6-205ENST00000507449 CARD19Q96LW7 228 aa0.63□□□□□ -2.31
LSM6-205ENST00000507449 HOPXQ9BPY8 73 aaPredicted RBP0.63□□□□□ -2.31
LSM6-205ENST00000507449 TMEM70Q9BUB7 260 aa0.63□□□□□ -2.31
LSM6-205ENST00000507449 PBOV1Q9GZY1 135 aa0.63□□□□□ -2.31
LSM6-205ENST00000507449 STOML2Q9UJZ1 356 aa0.63□□□□□ -2.31
LSM6-205ENST00000507449 KDM6AO15550 1401 aaPredicted RBP0.63□□□□□ -2.31
LSM6-205ENST00000507449 KIAA1549Q9HCM3 1950 aa0.63□□□□□ -2.31
LSM6-205ENST00000507449 MUC16Q8WXI7 14507 aa0.62□□□□□ -2.31
LSM6-205ENST00000507449 NCR3O14931 201 aa0.62□□□□□ -2.31
LSM6-205ENST00000507449 CXCL8P10145 99 aa0.62□□□□□ -2.31
LSM6-205ENST00000507449 OGNP20774 298 aaKnown RBP0.62□□□□□ -2.31
LSM6-205ENST00000507449 RAB5CP51148 216 aa0.62□□□□□ -2.31
LSM6-205ENST00000507449 TAS2R41P59536 307 aa0.62□□□□□ -2.31
LSM6-205ENST00000507449 LTC4SQ16873 150 aa0.62□□□□□ -2.31
LSM6-205ENST00000507449 TMED4Q7Z7H5 227 aa0.62□□□□□ -2.31
LSM6-205ENST00000507449 OR13C6PQ8NH95 151 aa0.62□□□□□ -2.31
LSM6-205ENST00000507449 PPTC7Q8NI37 304 aa0.62□□□□□ -2.31
LSM6-205ENST00000507449 MUCL1Q96DR8 90 aa0.62□□□□□ -2.31
LSM6-205ENST00000507449 HYLS1Q96M11 299 aa0.62□□□□□ -2.31
LSM6-205ENST00000507449 PBDC1Q9BVG4 233 aa0.62□□□□□ -2.31
LSM6-205ENST00000507449 CACYBPQ9HB71 228 aaKnown RBP0.62□□□□□ -2.31
LSM6-205ENST00000507449 RNF11Q9Y3C5 154 aa0.62□□□□□ -2.31
LSM6-205ENST00000507449 UFC1Q9Y3C8 167 aa0.62□□□□□ -2.31
LSM6-205ENST00000507449 UHRF1BP1Q6BDS2 1440 aa0.62□□□□□ -2.31
LSM6-205ENST00000507449 F8W1H4 67 aa0.61□□□□□ -2.31
LSM6-205ENST00000507449 POU6F1Q14863 301 aa0.61□□□□□ -2.31
LSM6-205ENST00000507449 GKN2Q86XP6 184 aa0.61□□□□□ -2.31
LSM6-205ENST00000507449 ZNF714Q96N38 554 aa0.61□□□□□ -2.31
LSM6-205ENST00000507449 PRRT1Q99946 306 aa0.61□□□□□ -2.31
LSM6-205ENST00000507449 LAMA4Q16363 1823 aa0.61□□□□□ -2.31
LSM6-205ENST00000507449 DOCK4Q8N1I0 1966 aa0.61□□□□□ -2.31
LSM6-205ENST00000507449 NUP98P52948 1817 aa0.6□□□□□ -2.31
LSM6-205ENST00000507449 MYH10P35580 1976 aa0.6□□□□□ -2.31
LSM6-205ENST00000507449 TRAV27A0A087WT01 109 aa0.6□□□□□ -2.31
LSM6-205ENST00000507449 IFNA14P01570 189 aa0.6□□□□□ -2.31
LSM6-205ENST00000507449 COX7CP15954 63 aa0.6□□□□□ -2.31
LSM6-205ENST00000507449 GLRXP35754 106 aa0.6□□□□□ -2.31
LSM6-205ENST00000507449 PPP1R2P41236 205 aa0.6□□□□□ -2.31
LSM6-205ENST00000507449 KLRD1Q13241 179 aa0.6□□□□□ -2.31
LSM6-205ENST00000507449 C1orf140Q5VVS0 124 aa0.6□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 95 ms