RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 PDCD10Q9BUL8 212 aa4.7□□□□□ -1.66
VCAN-207ENST00000507162 ARGLU1Q9NWB6 273 aaPredicted RBP4.7□□□□□ -1.66
VCAN-207ENST00000507162 PRO0255Q9UI72 69 aa4.7□□□□□ -1.66
VCAN-207ENST00000507162 HHLA3Q9XRX5 114 aa4.7□□□□□ -1.66
VCAN-207ENST00000507162 FUT9Q9Y231 359 aa4.7□□□□□ -1.66
VCAN-207ENST00000507162 IGHV3-30P01768 117 aa4.69□□□□□ -1.66
VCAN-207ENST00000507162 IGHV3-33P01772 117 aa4.69□□□□□ -1.66
VCAN-207ENST00000507162 IGHV3-30-3P0DP02 117 aa4.69□□□□□ -1.66
VCAN-207ENST00000507162 IGHV3-30-5P0DP03 117 aa4.69□□□□□ -1.66
VCAN-207ENST00000507162 PSMB9P28065 219 aa4.69□□□□□ -1.66
VCAN-207ENST00000507162 MEOX2P50222 304 aa4.69□□□□□ -1.66
VCAN-207ENST00000507162 SUPT4H1P63272 117 aaKnown RBP4.69□□□□□ -1.66
VCAN-207ENST00000507162 PSG3Q16557 428 aa4.69□□□□□ -1.66
VCAN-207ENST00000507162 C1orf194Q5T5A4 169 aa4.69□□□□□ -1.66
VCAN-207ENST00000507162 C1orf146Q5VVC0 180 aa4.69□□□□□ -1.66
VCAN-207ENST00000507162 SAMD13Q5VXD3 122 aa4.69□□□□□ -1.66
VCAN-207ENST00000507162 MZT2BQ6NZ67 158 aa4.69□□□□□ -1.66
VCAN-207ENST00000507162 NANOGP1Q8N7R0 232 aa4.69□□□□□ -1.66
VCAN-207ENST00000507162 IL22RA2Q969J5 263 aa4.69□□□□□ -1.66
VCAN-207ENST00000507162 LINC01600Q96MT4 127 aa4.69□□□□□ -1.66
VCAN-207ENST00000507162 RRP15Q9Y3B9 282 aaKnown RBP4.69□□□□□ -1.66
VCAN-207ENST00000507162 IGHV3-38A0A0C4DH36 116 aa4.68□□□□□ -1.66
VCAN-207ENST00000507162 C9JCJ5 164 aa4.68□□□□□ -1.66
VCAN-207ENST00000507162 CASQ2O14958 399 aaPredicted RBP4.68□□□□□ -1.66
VCAN-207ENST00000507162 ARL6IP5O75915 188 aa4.68□□□□□ -1.66
VCAN-207ENST00000507162 NXPH3O95157 252 aa4.68□□□□□ -1.66
VCAN-207ENST00000507162 SLC25A4P12235 298 aa4.68□□□□□ -1.66
VCAN-207ENST00000507162 GALR1P47211 349 aa4.68□□□□□ -1.66
VCAN-207ENST00000507162 CRYBA4P53673 196 aa4.68□□□□□ -1.66
VCAN-207ENST00000507162 LYZP61626 148 aa4.68□□□□□ -1.66
VCAN-207ENST00000507162 DAZ2Q13117 558 aaKnown RBP4.68□□□□□ -1.66
VCAN-207ENST00000507162 PHLDA2Q53GA4 152 aa4.68□□□□□ -1.66
VCAN-207ENST00000507162 OR8G2PQ6IF36 304 aa4.68□□□□□ -1.66
VCAN-207ENST00000507162 TMEM91Q6ZNR0 172 aa4.68□□□□□ -1.66
VCAN-207ENST00000507162 C9orf47Q6ZRZ4 202 aa4.68□□□□□ -1.66
VCAN-207ENST00000507162 THAP8Q8NA92 274 aa4.68□□□□□ -1.66
VCAN-207ENST00000507162 ZNF555Q8NEP9 628 aa4.68□□□□□ -1.66
VCAN-207ENST00000507162 BLNKQ8WV28 456 aa4.68□□□□□ -1.66
VCAN-207ENST00000507162 MRGPRFQ96AM1 343 aa4.68□□□□□ -1.66
VCAN-207ENST00000507162 SLC25A22Q9H936 323 aa4.68□□□□□ -1.66
VCAN-207ENST00000507162 GSN-AS1Q9NRJ2 163 aa4.68□□□□□ -1.66
VCAN-207ENST00000507162 A0A0D9SG52 128 aa4.67□□□□□ -1.66
VCAN-207ENST00000507162 INS-IGF2F8WCM5 200 aa4.67□□□□□ -1.66
VCAN-207ENST00000507162 K7EQD1 137 aa4.67□□□□□ -1.66
VCAN-207ENST00000507162 IGKV1-39P01597 117 aa4.67□□□□□ -1.66
VCAN-207ENST00000507162 IGKV1D-39P04432 117 aa4.67□□□□□ -1.66
VCAN-207ENST00000507162 HSMCR30P0CW71 290 aa4.67□□□□□ -1.66
VCAN-207ENST00000507162 GATA2P23769 480 aaPredicted RBP4.67□□□□□ -1.66
VCAN-207ENST00000507162 SLAQ13239 276 aa4.67□□□□□ -1.66
VCAN-207ENST00000507162 OR2F1Q13607 317 aa4.67□□□□□ -1.66
VCAN-207ENST00000507162 MORN5Q5VZ52 161 aa4.67□□□□□ -1.66
VCAN-207ENST00000507162 AHSA2Q719I0 299 aa4.67□□□□□ -1.66
VCAN-207ENST00000507162 Q8N976 141 aa4.67□□□□□ -1.66
VCAN-207ENST00000507162 SLC24A4Q8NFF2 622 aa4.67□□□□□ -1.66
VCAN-207ENST00000507162 OR8A1Q8NGG7 326 aa4.67□□□□□ -1.66
VCAN-207ENST00000507162 PCNPQ8WW12 178 aaKnown RBP4.67□□□□□ -1.66
VCAN-207ENST00000507162 PYDC1Q8WXC3 89 aa4.67□□□□□ -1.66
VCAN-207ENST00000507162 PARD6GQ9BYG4 376 aaPredicted RBP4.67□□□□□ -1.66
VCAN-207ENST00000507162 TRAV8-2A0A0B4J237 113 aa4.66□□□□□ -1.66
VCAN-207ENST00000507162 TRGV4A0A0C4DH28 118 aa4.66□□□□□ -1.66
VCAN-207ENST00000507162 IFITM5A6NNB3 132 aa4.66□□□□□ -1.66
VCAN-207ENST00000507162 NOTOA8MTQ0 251 aa4.66□□□□□ -1.66
VCAN-207ENST00000507162 SNRPGP15A8MWD9 76 aa4.66□□□□□ -1.66
VCAN-207ENST00000507162 GPR31O00270 319 aa4.66□□□□□ -1.66
VCAN-207ENST00000507162 HTR2BP41595 481 aa4.66□□□□□ -1.66
VCAN-207ENST00000507162 TAS2R20P59543 309 aa4.66□□□□□ -1.66
VCAN-207ENST00000507162 ZNF90Q03938 601 aa4.66□□□□□ -1.66
VCAN-207ENST00000507162 FHL2Q14192 279 aa4.66□□□□□ -1.66
VCAN-207ENST00000507162 LINC01556Q5JQF7 62 aa4.66□□□□□ -1.66
VCAN-207ENST00000507162 FFAR4Q5NUL3 377 aa4.66□□□□□ -1.66
VCAN-207ENST00000507162 LCE5AQ5TCM9 118 aa4.66□□□□□ -1.66
VCAN-207ENST00000507162 ETFRF1Q6IPR1 90 aa4.66□□□□□ -1.66
VCAN-207ENST00000507162 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.66□□□□□ -1.66
VCAN-207ENST00000507162 CCDC190Q86UF4 302 aa4.66□□□□□ -1.66
VCAN-207ENST00000507162 HOGA1Q86XE5 327 aa4.66□□□□□ -1.66
VCAN-207ENST00000507162 SPARTQ8N0X7 666 aa4.66□□□□□ -1.66
VCAN-207ENST00000507162 ARRDC1Q8N5I2 433 aa4.66□□□□□ -1.66
VCAN-207ENST00000507162 ZNF2Q9BSG1 426 aaPredicted RBP4.66□□□□□ -1.66
VCAN-207ENST00000507162 MRPL32Q9BYC8 188 aaKnown RBP4.66□□□□□ -1.66
VCAN-207ENST00000507162 SLC25A32Q9H2D1 315 aa4.66□□□□□ -1.66
VCAN-207ENST00000507162 HEYLQ9NQ87 328 aaPredicted RBP4.66□□□□□ -1.66
VCAN-207ENST00000507162 EHFQ9NZC4 300 aa4.66□□□□□ -1.66
VCAN-207ENST00000507162 RPH3ALQ9UNE2 315 aa4.66□□□□□ -1.66
VCAN-207ENST00000507162 TRAV8-6A0A0B4J262 113 aa4.65□□□□□ -1.67
VCAN-207ENST00000507162 TRAV12-3A0A0B4J271 114 aa4.65□□□□□ -1.67
VCAN-207ENST00000507162 ZFP92A6NM28 416 aa4.65□□□□□ -1.67
VCAN-207ENST00000507162 PDCD5O14737 125 aa4.65□□□□□ -1.67
VCAN-207ENST00000507162 S100GP29377 79 aa4.65□□□□□ -1.67
VCAN-207ENST00000507162 RFX2P48378 723 aa4.65□□□□□ -1.67
VCAN-207ENST00000507162 KRTAP10-8P60410 259 aa4.65□□□□□ -1.67
VCAN-207ENST00000507162 GNGT1P63211 74 aa4.65□□□□□ -1.67
VCAN-207ENST00000507162 KLF9Q13886 244 aaPredicted RBP4.65□□□□□ -1.67
VCAN-207ENST00000507162 SPHARQ15513 63 aa4.65□□□□□ -1.67
VCAN-207ENST00000507162 GFI1BQ5VTD9 330 aa4.65□□□□□ -1.67
VCAN-207ENST00000507162 TBC1D26Q86UD7 250 aa4.65□□□□□ -1.67
VCAN-207ENST00000507162 OR5AP2Q8NGF4 316 aa4.65□□□□□ -1.67
VCAN-207ENST00000507162 RNASEH2CQ8TDP1 164 aaKnown RBP4.65□□□□□ -1.67
VCAN-207ENST00000507162 UFD1Q92890 307 aa4.65□□□□□ -1.67
VCAN-207ENST00000507162 DPH3Q96FX2 82 aa4.65□□□□□ -1.67
VCAN-207ENST00000507162 ST6GAL2Q96JF0 529 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms