RNA–Protein interactions for RNA: ENST00000505346.5

SMN2-205, Transcript of survival of motor neuron 2, centromeric, humanhuman

TSL 3

Gene SMN2, Length 707 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-205ENST00000505346 NOSIPQ9Y314 301 aaKnown RBP-0.42□□□□□ -2.48
SMN2-205ENST00000505346 LY96Q9Y6Y9 160 aa-0.42□□□□□ -2.48
SMN2-205ENST00000505346 FLNCQ14315 2725 aa-0.42□□□□□ -2.48
SMN2-205ENST00000505346 TTC28Q96AY4 2481 aa-0.42□□□□□ -2.48
SMN2-205ENST00000505346 ABCA12Q86UK0 2595 aa-0.43□□□□□ -2.48
SMN2-205ENST00000505346 NUP98P52948 1817 aa-0.43□□□□□ -2.48
SMN2-205ENST00000505346 CACNA1HO95180 2353 aa-0.43□□□□□ -2.48
SMN2-205ENST00000505346 NCOA1Q15788 1441 aa-0.43□□□□□ -2.48
SMN2-205ENST00000505346 A8MWV9 139 aa-0.43□□□□□ -2.48
SMN2-205ENST00000505346 IGLV1-51P01701 117 aa-0.43□□□□□ -2.48
SMN2-205ENST00000505346 CD3DP04234 171 aa-0.43□□□□□ -2.48
SMN2-205ENST00000505346 TPM3P06753 285 aa-0.43□□□□□ -2.48
SMN2-205ENST00000505346 C8GP07360 202 aa-0.43□□□□□ -2.48
SMN2-205ENST00000505346 SRP14P37108 136 aaKnown RBP-0.43□□□□□ -2.48
SMN2-205ENST00000505346 FXYD6P3P58550 94 aa-0.43□□□□□ -2.48
SMN2-205ENST00000505346 AP3S2P59780 193 aa-0.43□□□□□ -2.48
SMN2-205ENST00000505346 PRR15Q8IV56 129 aa-0.43□□□□□ -2.48
SMN2-205ENST00000505346 RAB37Q96AX2 223 aa-0.43□□□□□ -2.48
SMN2-205ENST00000505346 CCL19Q99731 98 aa-0.43□□□□□ -2.48
SMN2-205ENST00000505346 CMSS1Q9BQ75 279 aaKnown RBP-0.43□□□□□ -2.48
SMN2-205ENST00000505346 CCDC94Q9BW85 323 aaPredicted RBP-0.43□□□□□ -2.48
SMN2-205ENST00000505346 PARD6GQ9BYG4 376 aaPredicted RBP-0.43□□□□□ -2.48
SMN2-205ENST00000505346 PIK3C2GO75747 1445 aa-0.44□□□□□ -2.48
SMN2-205ENST00000505346 MIA2Q96PC5 1412 aa-0.44□□□□□ -2.48
SMN2-205ENST00000505346 ERBINQ96RT1 1412 aa-0.44□□□□□ -2.48
SMN2-205ENST00000505346 DOCK4Q8N1I0 1966 aa-0.44□□□□□ -2.48
SMN2-205ENST00000505346 TRGV10A0A0A0MS01 117 aa-0.44□□□□□ -2.48
SMN2-205ENST00000505346 LY6G6CO95867 125 aa-0.44□□□□□ -2.48
SMN2-205ENST00000505346 TPM4P67936 248 aa-0.44□□□□□ -2.48
SMN2-205ENST00000505346 CDK6Q00534 326 aa-0.44□□□□□ -2.48
SMN2-205ENST00000505346 TMED1Q13445 227 aa-0.44□□□□□ -2.48
SMN2-205ENST00000505346 KRR1Q13601 381 aaKnown RBP-0.44□□□□□ -2.48
SMN2-205ENST00000505346 IAH1Q2TAA2 248 aaPredicted RBP-0.44□□□□□ -2.48
SMN2-205ENST00000505346 ASB16-AS1Q495Z4 193 aa-0.44□□□□□ -2.48
SMN2-205ENST00000505346 CCDC122Q5T0U0 273 aa-0.44□□□□□ -2.48
SMN2-205ENST00000505346 C22orf39Q6P5X5 142 aa-0.44□□□□□ -2.48
SMN2-205ENST00000505346 TMEM14EPQ6UXP3 125 aa-0.44□□□□□ -2.48
SMN2-205ENST00000505346 Q6ZQY7 126 aa-0.44□□□□□ -2.48
SMN2-205ENST00000505346 OR6V1Q8N148 313 aa-0.44□□□□□ -2.48
SMN2-205ENST00000505346 DDI1Q8WTU0 396 aa-0.44□□□□□ -2.48
SMN2-205ENST00000505346 LIMD2Q9BT23 127 aa-0.44□□□□□ -2.48
SMN2-205ENST00000505346 RNF122Q9H9V4 155 aa-0.44□□□□□ -2.48
SMN2-205ENST00000505346 TVP23BQ9NYZ1 205 aa-0.44□□□□□ -2.48
SMN2-205ENST00000505346 OPTCQ9UBM4 332 aa-0.44□□□□□ -2.48
SMN2-205ENST00000505346 CACNA1CQ13936 2221 aa-0.45□□□□□ -2.48
SMN2-205ENST00000505346 M0R233 179 aa-0.45□□□□□ -2.48
SMN2-205ENST00000505346 SERPINB9P50453 376 aa-0.45□□□□□ -2.48
SMN2-205ENST00000505346 PIGPP57054 158 aa-0.45□□□□□ -2.48
SMN2-205ENST00000505346 OCIAD2Q56VL3 154 aa-0.45□□□□□ -2.48
SMN2-205ENST00000505346 OR5AS1Q8N127 324 aa-0.45□□□□□ -2.48
SMN2-205ENST00000505346 POP5Q969H6 163 aaKnown RBP-0.45□□□□□ -2.48
SMN2-205ENST00000505346 BORCS7Q96B45 105 aa-0.45□□□□□ -2.48
SMN2-205ENST00000505346 MUCL1Q96DR8 90 aa-0.45□□□□□ -2.48
SMN2-205ENST00000505346 A0A087WSZ3 146 aa-0.46□□□□□ -2.48
SMN2-205ENST00000505346 KPNA3O00505 521 aaPredicted RBP-0.46□□□□□ -2.48
SMN2-205ENST00000505346 LYPLA2O95372 231 aa-0.46□□□□□ -2.48
SMN2-205ENST00000505346 RRN3P1Q2M238 152 aa-0.46□□□□□ -2.48
SMN2-205ENST00000505346 LYG2Q86SG7 212 aa-0.46□□□□□ -2.48
SMN2-205ENST00000505346 ZNF431Q8TF32 576 aaPredicted RBP-0.46□□□□□ -2.48
SMN2-205ENST00000505346 GLTPQ9NZD2 209 aa-0.46□□□□□ -2.48
SMN2-205ENST00000505346 PRELID3BQ9Y3B1 194 aa-0.46□□□□□ -2.48
SMN2-205ENST00000505346 RNF11Q9Y3C5 154 aa-0.46□□□□□ -2.48
SMN2-205ENST00000505346 PCLOQ9Y6V0 5065 aa-0.46□□□□□ -2.48
SMN2-205ENST00000505346 ASXL3Q9C0F0 2248 aa-0.46□□□□□ -2.48
SMN2-205ENST00000505346 NUP210LQ5VU65 1888 aa-0.47□□□□□ -2.48
SMN2-205ENST00000505346 J3QRK9 145 aa-0.47□□□□□ -2.48
SMN2-205ENST00000505346 PDE6DO43924 150 aa-0.47□□□□□ -2.48
SMN2-205ENST00000505346 MAGOHP61326 146 aaKnown RBP-0.47□□□□□ -2.48
SMN2-205ENST00000505346 RANP62826 216 aaKnown RBP-0.47□□□□□ -2.48
SMN2-205ENST00000505346 EIF3IQ13347 325 aaKnown RBP-0.47□□□□□ -2.48
SMN2-205ENST00000505346 LYRM7Q5U5X0 104 aa-0.47□□□□□ -2.48
SMN2-205ENST00000505346 OR51A2Q8NGJ7 313 aa-0.47□□□□□ -2.48
SMN2-205ENST00000505346 KDM6BO15054 1643 aa-0.47□□□□□ -2.48
SMN2-205ENST00000505346 WNK2Q9Y3S1 2297 aa-0.48□□□□□ -2.49
SMN2-205ENST00000505346 TRAV4A0A0B4J268 109 aa-0.48□□□□□ -2.49
SMN2-205ENST00000505346 C9orf170A2RU37 121 aa-0.48□□□□□ -2.49
SMN2-205ENST00000505346 C17orf112F2Z3M2 114 aa-0.48□□□□□ -2.49
SMN2-205ENST00000505346 TMEM256-PLSCR3K7ERE1 68 aa-0.48□□□□□ -2.49
SMN2-205ENST00000505346 M0R036 132 aa-0.48□□□□□ -2.49
SMN2-205ENST00000505346 TAX1BP3O14907 124 aa-0.48□□□□□ -2.49
SMN2-205ENST00000505346 ATP5G3P48201 142 aa-0.48□□□□□ -2.49
SMN2-205ENST00000505346 RPL37AP61513 92 aaKnown RBP-0.48□□□□□ -2.49
SMN2-205ENST00000505346 COTL1Q14019 142 aa-0.48□□□□□ -2.49
SMN2-205ENST00000505346 KRTAP20-2Q3LI61 65 aa-0.48□□□□□ -2.49
SMN2-205ENST00000505346 PATE2Q6UY27 113 aa-0.48□□□□□ -2.49
SMN2-205ENST00000505346 ARPINQ7Z6K5 226 aa-0.48□□□□□ -2.49
SMN2-205ENST00000505346 OR10AG1Q8NH19 301 aa-0.48□□□□□ -2.49
SMN2-205ENST00000505346 YPEL2Q96QA6 119 aa-0.48□□□□□ -2.49
SMN2-205ENST00000505346 KIFC1Q9BW19 673 aa-0.48□□□□□ -2.49
SMN2-205ENST00000505346 UNC79Q9P2D8 2635 aa-0.48□□□□□ -2.49
SMN2-205ENST00000505346 RTL1A6NKG5 1358 aa-0.48□□□□□ -2.49
SMN2-205ENST00000505346 CCDC144AA2RUR9 1427 aa-0.48□□□□□ -2.49
SMN2-205ENST00000505346 HMCN2Q8NDA2 5059 aa-0.48□□□□□ -2.49
SMN2-205ENST00000505346 CETN3O15182 167 aa-0.49□□□□□ -2.49
SMN2-205ENST00000505346 OR7C1O76099 320 aaPredicted RBP-0.49□□□□□ -2.49
SMN2-205ENST00000505346 SPINK1P00995 79 aa-0.49□□□□□ -2.49
SMN2-205ENST00000505346 UBE2BP63146 152 aa-0.49□□□□□ -2.49
SMN2-205ENST00000505346 IMPG1Q17R60 797 aa-0.49□□□□□ -2.49
SMN2-205ENST00000505346 KRTAP19-7Q3SYF9 63 aa-0.49□□□□□ -2.49
SMN2-205ENST00000505346 C10orf99Q6UWK7 81 aa-0.49□□□□□ -2.49
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms