RNA–Protein interactions for RNA: ENST00000503492.5

PCDH1-204, Transcript of protocadherin 1, humanhuman

TSL 5 BASIC

Gene PCDH1, Length 2,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-204ENST00000503492 NAT8BQ9UHF3 227 aa17.58■□□□□ 0.4
PCDH1-204ENST00000503492 LINC01548A6NM66 108 aa17.57■□□□□ 0.4
PCDH1-204ENST00000503492 ATP5J2P56134 94 aa17.57■□□□□ 0.4
PCDH1-204ENST00000503492 GOLT1AQ6ZVE7 132 aa17.57■□□□□ 0.4
PCDH1-204ENST00000503492 ZNF414Q96IQ9 312 aa17.57■□□□□ 0.4
PCDH1-204ENST00000503492 CHRDL1Q9BU40 450 aa17.57■□□□□ 0.4
PCDH1-204ENST00000503492 LINC00587B1AMM8 73 aa17.57■□□□□ 0.4
PCDH1-204ENST00000503492 IGLV2-11P01706 119 aa17.57■□□□□ 0.4
PCDH1-204ENST00000503492 MT-ND6P03923 174 aa17.57■□□□□ 0.4
PCDH1-204ENST00000503492 AMY1AP04745 511 aa17.57■□□□□ 0.4
PCDH1-204ENST00000503492 NDUFS8O00217 210 aa17.56■□□□□ 0.4
PCDH1-204ENST00000503492 CRISP2P16562 243 aa17.56■□□□□ 0.4
PCDH1-204ENST00000503492 COX19Q49B96 90 aa17.56■□□□□ 0.4
PCDH1-204ENST00000503492 CLEC2AQ6UVW9 174 aa17.56■□□□□ 0.4
PCDH1-204ENST00000503492 Q86TA4 180 aa17.56■□□□□ 0.4
PCDH1-204ENST00000503492 DOPEY1Q5JWR5 2465 aa17.56■□□□□ 0.4
PCDH1-204ENST00000503492 IGHV4-30-2A0A087WSY4 118 aa17.55■□□□□ 0.4
PCDH1-204ENST00000503492 IGHV1-69DA0A0B4J2H0 117 aa17.55■□□□□ 0.4
PCDH1-204ENST00000503492 IGHV1-69P01742 117 aa17.55■□□□□ 0.4
PCDH1-204ENST00000503492 JOSD1Q15040 202 aaPredicted RBP17.55■□□□□ 0.4
PCDH1-204ENST00000503492 NUP35Q8NFH5 326 aa17.55■□□□□ 0.4
PCDH1-204ENST00000503492 TXN2Q99757 166 aa17.55■□□□□ 0.4
PCDH1-204ENST00000503492 DNLZQ5SXM8 178 aa17.55■□□□□ 0.4
PCDH1-204ENST00000503492 C5orf56Q8N8D9 126 aa17.55■□□□□ 0.4
PCDH1-204ENST00000503492 VN1R17PQ8TDU5 208 aa17.55■□□□□ 0.4
PCDH1-204ENST00000503492 TSKUQ8WUA8 353 aa17.55■□□□□ 0.4
PCDH1-204ENST00000503492 C19orf71A6NCJ1 209 aa17.54■□□□□ 0.4
PCDH1-204ENST00000503492 G3V318 75 aa17.54■□□□□ 0.4
PCDH1-204ENST00000503492 RAB4BP61018 213 aa17.54■□□□□ 0.4
PCDH1-204ENST00000503492 KLK9Q2XQG4 91 aa17.54■□□□□ 0.4
PCDH1-204ENST00000503492 BRD3OSQ6XYD6 125 aa17.54■□□□□ 0.4
PCDH1-204ENST00000503492 Q71RC1 249 aaPredicted RBP17.54■□□□□ 0.4
PCDH1-204ENST00000503492 S100A7AQ86SG5 101 aa17.54■□□□□ 0.4
PCDH1-204ENST00000503492 LYPD1Q8N2G4 141 aa17.54■□□□□ 0.4
PCDH1-204ENST00000503492 KLK9Q9UKQ9 250 aa17.54■□□□□ 0.4
PCDH1-204ENST00000503492 COL12A1Q99715 3063 aa17.54■□□□□ 0.4
PCDH1-204ENST00000503492 CACNA1BQ00975 2339 aa17.54■□□□□ 0.4
PCDH1-204ENST00000503492 TRAV40A0A0B4J280 105 aa17.54■□□□□ 0.4
PCDH1-204ENST00000503492 LINC00310P59036 64 aa17.54■□□□□ 0.4
PCDH1-204ENST00000503492 C15orf32Q32M92 178 aa17.54■□□□□ 0.4
PCDH1-204ENST00000503492 TMEM219Q86XT9 240 aa17.54■□□□□ 0.4
PCDH1-204ENST00000503492 NEU1Q99519 415 aa17.54■□□□□ 0.4
PCDH1-204ENST00000503492 PRSS22Q9GZN4 317 aa17.54■□□□□ 0.4
PCDH1-204ENST00000503492 PRDM13Q9H4Q3 707 aa17.54■□□□□ 0.4
PCDH1-204ENST00000503492 ZNF492Q9P255 531 aa17.54■□□□□ 0.4
PCDH1-204ENST00000503492 PRB1P04280 392 aa17.53■□□□□ 0.4
PCDH1-204ENST00000503492 GZMBP10144 247 aa17.53■□□□□ 0.4
PCDH1-204ENST00000503492 PRNTQ86SH4 94 aa17.53■□□□□ 0.4
PCDH1-204ENST00000503492 SPOCK3Q9BQ16 436 aa17.53■□□□□ 0.4
PCDH1-204ENST00000503492 PRB4P10163 310 aaPredicted RBP17.53■□□□□ 0.4
PCDH1-204ENST00000503492 RHOGP84095 191 aa17.53■□□□□ 0.4
PCDH1-204ENST00000503492 KIAA1644Q3SXP7 199 aa17.53■□□□□ 0.4
PCDH1-204ENST00000503492 ZNF502Q8TBZ5 544 aa17.53■□□□□ 0.4
PCDH1-204ENST00000503492 F2Z2F3 143 aa17.52■□□□□ 0.4
PCDH1-204ENST00000503492 HLA-DQA1P01909 254 aa17.52■□□□□ 0.4
PCDH1-204ENST00000503492 CIARTQ8N365 385 aaPredicted RBP17.52■□□□□ 0.4
PCDH1-204ENST00000503492 PIFOQ8TCI5 191 aa17.52■□□□□ 0.4
PCDH1-204ENST00000503492 RPP21Q9H633 154 aaKnown RBP17.52■□□□□ 0.4
PCDH1-204ENST00000503492 ZNF331Q9NQX6 463 aaPredicted RBP17.52■□□□□ 0.4
PCDH1-204ENST00000503492 HIGD1CA8MV81 97 aa17.52■□□□□ 0.39
PCDH1-204ENST00000503492 SCGB2A1O75556 95 aa17.52■□□□□ 0.39
PCDH1-204ENST00000503492 USP9XQ93008 2570 aaPredicted RBP17.51■□□□□ 0.39
PCDH1-204ENST00000503492 TRBV6-1A0A0K0K1D8 114 aa17.51■□□□□ 0.39
PCDH1-204ENST00000503492 GPR183P32249 361 aa17.51■□□□□ 0.39
PCDH1-204ENST00000503492 Q0VG73 95 aa17.51■□□□□ 0.39
PCDH1-204ENST00000503492 WIPF2Q8TF74 440 aaPredicted RBP17.51■□□□□ 0.39
PCDH1-204ENST00000503492 TMEM190Q8WZ59 177 aa17.51■□□□□ 0.39
PCDH1-204ENST00000503492 OR5R1Q8NH85 324 aa17.51■□□□□ 0.39
PCDH1-204ENST00000503492 IGHV3-35A0A0C4DH35 117 aa17.5■□□□□ 0.39
PCDH1-204ENST00000503492 M0R3E3 92 aa17.5■□□□□ 0.39
PCDH1-204ENST00000503492 SERF1AO75920 110 aa17.5■□□□□ 0.39
PCDH1-204ENST00000503492 P01737 135 aa17.5■□□□□ 0.39
PCDH1-204ENST00000503492 PDE6HQ13956 83 aa17.5■□□□□ 0.39
PCDH1-204ENST00000503492 RASL11AQ6T310 242 aa17.5■□□□□ 0.39
PCDH1-204ENST00000503492 TMEM75Q8N9X5 138 aa17.5■□□□□ 0.39
PCDH1-204ENST00000503492 BMPR1BO00238 502 aa17.5■□□□□ 0.39
PCDH1-204ENST00000503492 IGHV4-38-2P0DP08 117 aa17.5■□□□□ 0.39
PCDH1-204ENST00000503492 GDF5OSQ5U4N7 250 aa17.5■□□□□ 0.39
PCDH1-204ENST00000503492 TCF24Q7RTU0 167 aa17.5■□□□□ 0.39
PCDH1-204ENST00000503492 GNB4Q9HAV0 340 aa17.5■□□□□ 0.39
PCDH1-204ENST00000503492 RABAC1Q9UI14 185 aa17.5■□□□□ 0.39
PCDH1-204ENST00000503492 MOB4Q9Y3A3 225 aa17.5■□□□□ 0.39
PCDH1-204ENST00000503492 IGHV3OR16-8A0A075B7F1 116 aa17.49■□□□□ 0.39
PCDH1-204ENST00000503492 CT83Q5H943 113 aa17.49■□□□□ 0.39
PCDH1-204ENST00000503492 NRGNQ92686 78 aa17.49■□□□□ 0.39
PCDH1-204ENST00000503492 MEGF9Q9H1U4 602 aa17.49■□□□□ 0.39
PCDH1-204ENST00000503492 ZNF785A8K8V0 405 aa17.48■□□□□ 0.39
PCDH1-204ENST00000503492 DIRC3C9JPN6 131 aa17.48■□□□□ 0.39
PCDH1-204ENST00000503492 ESDP10768 282 aa17.48■□□□□ 0.39
PCDH1-204ENST00000503492 BAGE3Q86Y29 109 aa17.48■□□□□ 0.39
PCDH1-204ENST00000503492 DAZAP1Q96EP5 407 aaKnown RBP17.48■□□□□ 0.39
PCDH1-204ENST00000503492 ASCL2Q99929 193 aa17.48■□□□□ 0.39
PCDH1-204ENST00000503492 SOX21Q9Y651 276 aaPredicted RBP17.48■□□□□ 0.39
PCDH1-204ENST00000503492 FLNCQ14315 2725 aa17.48■□□□□ 0.39
PCDH1-204ENST00000503492 APCSP02743 223 aa17.48■□□□□ 0.39
PCDH1-204ENST00000503492 CLEC3BP05452 202 aa17.48■□□□□ 0.39
PCDH1-204ENST00000503492 SLAQ13239 276 aa17.48■□□□□ 0.39
PCDH1-204ENST00000503492 CCDC140Q96MF4 163 aa17.48■□□□□ 0.39
PCDH1-204ENST00000503492 BBC3Q96PG8 261 aaPredicted RBP17.48■□□□□ 0.39
PCDH1-204ENST00000503492 A8MWL6 223 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms