RNA–Protein interactions for RNA: ENST00000502492.5

SNF8-202, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SNF8, Length 2,319 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-202ENST00000502492 IGKV1-17P01599 117 aa18.25■□□□□ 0.51
SNF8-202ENST00000502492 COL5A1-AS1Q5SY13 56 aa18.25■□□□□ 0.51
SNF8-202ENST00000502492 FAM162BQ5T6X4 162 aa18.25■□□□□ 0.51
SNF8-202ENST00000502492 VKORC1Q9BQB6 163 aa18.24■□□□□ 0.51
SNF8-202ENST00000502492 POLEQ07864 2286 aa18.24■□□□□ 0.51
SNF8-202ENST00000502492 FOSL1P15407 271 aa18.24■□□□□ 0.51
SNF8-202ENST00000502492 Q6ZN92 141 aa18.24■□□□□ 0.51
SNF8-202ENST00000502492 ATOH7Q8N100 152 aa18.24■□□□□ 0.51
SNF8-202ENST00000502492 TRAV8-1A0A0A6YYK1 113 aa18.23■□□□□ 0.51
SNF8-202ENST00000502492 TRBV6-1A0A0K0K1D8 114 aa18.23■□□□□ 0.51
SNF8-202ENST00000502492 C16orf54Q6UWD8 224 aa18.23■□□□□ 0.51
SNF8-202ENST00000502492 TMEM190Q8WZ59 177 aa18.23■□□□□ 0.51
SNF8-202ENST00000502492 TXN2Q99757 166 aa18.23■□□□□ 0.51
SNF8-202ENST00000502492 MAJINQ3KP22 176 aa18.23■□□□□ 0.51
SNF8-202ENST00000502492 EXOC3-AS1Q8N2X6 119 aa18.23■□□□□ 0.51
SNF8-202ENST00000502492 PRR31Q5SQ13 230 aa18.22■□□□□ 0.51
SNF8-202ENST00000502492 FAM120AOSQ5T036 256 aa18.22■□□□□ 0.51
SNF8-202ENST00000502492 CIARTQ8N365 385 aaPredicted RBP18.22■□□□□ 0.51
SNF8-202ENST00000502492 ABCA1O95477 2261 aa18.22■□□□□ 0.51
SNF8-202ENST00000502492 TRAV9-2A0A087WT02 112 aa18.22■□□□□ 0.51
SNF8-202ENST00000502492 K7EIM0 57 aa18.22■□□□□ 0.51
SNF8-202ENST00000502492 HNRNPA3P51991 378 aaKnown RBP18.22■□□□□ 0.51
SNF8-202ENST00000502492 PLGLAQ15195 96 aa18.22■□□□□ 0.51
SNF8-202ENST00000502492 GOLT1AQ6ZVE7 132 aa18.22■□□□□ 0.51
SNF8-202ENST00000502492 C20orf202A1L168 122 aa18.21■□□□□ 0.51
SNF8-202ENST00000502492 COL8A1P27658 744 aa18.21■□□□□ 0.51
SNF8-202ENST00000502492 Q56UQ5 140 aa18.21■□□□□ 0.51
SNF8-202ENST00000502492 LDLRAD2Q5SZI1 272 aa18.21■□□□□ 0.51
SNF8-202ENST00000502492 MUC15Q8N387 334 aa18.21■□□□□ 0.51
SNF8-202ENST00000502492 CHCHD1Q96BP2 118 aaKnown RBP18.21■□□□□ 0.51
SNF8-202ENST00000502492 SHANK2-AS3Q9BTD1 123 aa18.21■□□□□ 0.51
SNF8-202ENST00000502492 COL6A6A6NMZ7 2263 aa18.21■□□□□ 0.51
SNF8-202ENST00000502492 APOHP02749 345 aaPredicted RBP18.21■□□□□ 0.51
SNF8-202ENST00000502492 FOXA3P55318 350 aaPredicted RBP18.21■□□□□ 0.51
SNF8-202ENST00000502492 KIR3DL3Q8N743 410 aa18.21■□□□□ 0.51
SNF8-202ENST00000502492 BBC3Q96PG8 261 aaPredicted RBP18.21■□□□□ 0.51
SNF8-202ENST00000502492 LAMTOR2Q9Y2Q5 125 aa18.21■□□□□ 0.51
SNF8-202ENST00000502492 TRBV19A0A075B6N1 114 aa18.2■□□□□ 0.5
SNF8-202ENST00000502492 PRNTQ86SH4 94 aa18.2■□□□□ 0.5
SNF8-202ENST00000502492 LY6G5BQ8NDX9 201 aa18.2■□□□□ 0.5
SNF8-202ENST00000502492 NDFIP1Q9BT67 221 aa18.2■□□□□ 0.5
SNF8-202ENST00000502492 ZNF785A8K8V0 405 aa18.2■□□□□ 0.5
SNF8-202ENST00000502492 OVOL3O00110 214 aa18.2■□□□□ 0.5
SNF8-202ENST00000502492 HAX1O00165 279 aa18.2■□□□□ 0.5
SNF8-202ENST00000502492 TIMM23O14925 209 aa18.2■□□□□ 0.5
SNF8-202ENST00000502492 CD24P25063 80 aa18.2■□□□□ 0.5
SNF8-202ENST00000502492 LINC01560Q8TB33 94 aa18.2■□□□□ 0.5
SNF8-202ENST00000502492 RNF24Q9Y225 148 aa18.2■□□□□ 0.5
SNF8-202ENST00000502492 GOLT1BQ9Y3E0 138 aa18.2■□□□□ 0.5
SNF8-202ENST00000502492 LOC102724200A0A096LPH7 203 aaPredicted RBP18.19■□□□□ 0.5
SNF8-202ENST00000502492 CRXO43186 299 aaPredicted RBP18.19■□□□□ 0.5
SNF8-202ENST00000502492 CNIH1O95406 144 aa18.19■□□□□ 0.5
SNF8-202ENST00000502492 TMEM70Q9BUB7 260 aa18.19■□□□□ 0.5
SNF8-202ENST00000502492 H3BRN7 92 aa18.18■□□□□ 0.5
SNF8-202ENST00000502492 TSPOP30536 169 aa18.18■□□□□ 0.5
SNF8-202ENST00000502492 Q71RC1 249 aaPredicted RBP18.18■□□□□ 0.5
SNF8-202ENST00000502492 SPATA12Q7Z6I5 190 aa18.18■□□□□ 0.5
SNF8-202ENST00000502492 BPIFA4PQ86YQ2 179 aa18.18■□□□□ 0.5
SNF8-202ENST00000502492 C1RLQ9NZP8 487 aa18.18■□□□□ 0.5
SNF8-202ENST00000502492 MRPS16Q9Y3D3 137 aaKnown RBP18.18■□□□□ 0.5
SNF8-202ENST00000502492 CCL21O00585 134 aa18.18■□□□□ 0.5
SNF8-202ENST00000502492 LIPFP07098 398 aa18.18■□□□□ 0.5
SNF8-202ENST00000502492 TFPI2P48307 235 aa18.18■□□□□ 0.5
SNF8-202ENST00000502492 ZNF672Q499Z4 452 aaPredicted RBP18.18■□□□□ 0.5
SNF8-202ENST00000502492 STPG4Q8N801 248 aa18.18■□□□□ 0.5
SNF8-202ENST00000502492 CLEC5AQ9NY25 188 aa18.18■□□□□ 0.5
SNF8-202ENST00000502492 SH2D7A6NKC9 451 aaPredicted RBP18.17■□□□□ 0.5
SNF8-202ENST00000502492 TMEM75Q8N9X5 138 aa18.17■□□□□ 0.5
SNF8-202ENST00000502492 ONECUT1Q9UBC0 465 aa18.17■□□□□ 0.5
SNF8-202ENST00000502492 IGHV1-24A0A0C4DH33 117 aa18.17■□□□□ 0.5
SNF8-202ENST00000502492 M0QZ24 198 aa18.17■□□□□ 0.5
SNF8-202ENST00000502492 CHEK1O14757 476 aa18.17■□□□□ 0.5
SNF8-202ENST00000502492 SIAH2O43255 324 aa18.17■□□□□ 0.5
SNF8-202ENST00000502492 NPSP0C0P6 89 aa18.17■□□□□ 0.5
SNF8-202ENST00000502492 LYPD1Q8N2G4 141 aa18.17■□□□□ 0.5
SNF8-202ENST00000502492 ZNF491Q8N8L2 437 aa18.17■□□□□ 0.5
SNF8-202ENST00000502492 C17orf77Q96MU5 243 aa18.17■□□□□ 0.5
SNF8-202ENST00000502492 ZFP30Q9Y2G7 519 aa18.17■□□□□ 0.5
SNF8-202ENST00000502492 NBASA2RRP1 2371 aa18.16■□□□□ 0.5
SNF8-202ENST00000502492 TOX4O94842 621 aa18.16■□□□□ 0.5
SNF8-202ENST00000502492 SIGLEC15Q6ZMC9 328 aa18.16■□□□□ 0.5
SNF8-202ENST00000502492 OR4F17Q8NGA8 305 aa18.16■□□□□ 0.5
SNF8-202ENST00000502492 ZFYVE26Q68DK2 2539 aa18.16■□□□□ 0.5
SNF8-202ENST00000502492 NBR2O15453 112 aa18.16■□□□□ 0.5
SNF8-202ENST00000502492 IGLL1P15814 213 aa18.16■□□□□ 0.5
SNF8-202ENST00000502492 HTR1DP28221 377 aa18.16■□□□□ 0.5
SNF8-202ENST00000502492 OR11H6Q8NGC7 330 aa18.16■□□□□ 0.5
SNF8-202ENST00000502492 ZC2HC1AQ96GY0 325 aa18.16■□□□□ 0.5
SNF8-202ENST00000502492 LINC00614P0C842 121 aa18.15■□□□□ 0.5
SNF8-202ENST00000502492 NPBQ8NG41 125 aa18.15■□□□□ 0.5
SNF8-202ENST00000502492 CFHR4Q92496 578 aa18.15■□□□□ 0.5
SNF8-202ENST00000502492 MRPS12O15235 138 aaKnown RBP18.15■□□□□ 0.5
SNF8-202ENST00000502492 DMRTA1Q5VZB9 504 aa18.15■□□□□ 0.5
SNF8-202ENST00000502492 RNF125Q96EQ8 232 aa18.15■□□□□ 0.5
SNF8-202ENST00000502492 DPM3Q9P2X0 92 aa18.15■□□□□ 0.5
SNF8-202ENST00000502492 CFAP46Q8IYW2 2715 aa18.15■□□□□ 0.5
SNF8-202ENST00000502492 NDUFA3O95167 84 aa18.14■□□□□ 0.49
SNF8-202ENST00000502492 PRB1P04280 392 aa18.14■□□□□ 0.49
SNF8-202ENST00000502492 FBXL19-AS1Q494R0 122 aa18.14■□□□□ 0.49
SNF8-202ENST00000502492 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms