RNA–Protein interactions for RNA: ENST00000498530.5

PMPCB-208, Transcript of peptidase, mitochondrial processing beta subunit, humanhuman

TSL 2

Gene PMPCB, Length 1,161 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCB-208ENST00000498530 A8MT66 165 aa3.14□□□□□ -1.91
PMPCB-208ENST00000498530 LOC730098B7Z3J9 87 aa3.14□□□□□ -1.91
PMPCB-208ENST00000498530 TXNDC9O14530 226 aa3.14□□□□□ -1.91
PMPCB-208ENST00000498530 GNRH2O43555 120 aa3.14□□□□□ -1.91
PMPCB-208ENST00000498530 GZMHP20718 246 aa3.14□□□□□ -1.91
PMPCB-208ENST00000498530 HIST1H2BOP23527 126 aa3.14□□□□□ -1.91
PMPCB-208ENST00000498530 HIST1H2BBP33778 126 aa3.14□□□□□ -1.91
PMPCB-208ENST00000498530 HIST1H2BDP58876 126 aa3.14□□□□□ -1.91
PMPCB-208ENST00000498530 DEFA1P59665 94 aa3.14□□□□□ -1.91
PMPCB-208ENST00000498530 HIST1H2BCP62807 126 aa3.14□□□□□ -1.91
PMPCB-208ENST00000498530 RPL18Q07020 188 aaKnown RBP3.14□□□□□ -1.91
PMPCB-208ENST00000498530 HIST2H2BEQ16778 126 aa3.14□□□□□ -1.91
PMPCB-208ENST00000498530 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.14□□□□□ -1.91
PMPCB-208ENST00000498530 HIST1H2BHQ93079 126 aa3.14□□□□□ -1.91
PMPCB-208ENST00000498530 TVP23CQ96ET8 276 aa3.14□□□□□ -1.91
PMPCB-208ENST00000498530 HIST1H2BNQ99877 126 aa3.14□□□□□ -1.91
PMPCB-208ENST00000498530 HIST1H2BMQ99879 126 aa3.14□□□□□ -1.91
PMPCB-208ENST00000498530 PRO0461Q9UI25 63 aa3.14□□□□□ -1.91
PMPCB-208ENST00000498530 AHCTF1Q8WYP5 2266 aa3.14□□□□□ -1.91
PMPCB-208ENST00000498530 KMT2CQ8NEZ4 4911 aaKnown RBP3.14□□□□□ -1.91
PMPCB-208ENST00000498530 SCN10AQ9Y5Y9 1956 aa3.14□□□□□ -1.91
PMPCB-208ENST00000498530 RFX7Q2KHR2 1363 aa3.13□□□□□ -1.91
PMPCB-208ENST00000498530 URB1O60287 2271 aaKnown RBP3.13□□□□□ -1.91
PMPCB-208ENST00000498530 ATRQ13535 2644 aa3.13□□□□□ -1.91
PMPCB-208ENST00000498530 MUC22E2RYF6 1773 aaPredicted RBP3.13□□□□□ -1.91
PMPCB-208ENST00000498530 PTPRBP23467 1997 aa3.13□□□□□ -1.91
PMPCB-208ENST00000498530 IGKV1D-43A0A0B4J1Z2 117 aa3.13□□□□□ -1.91
PMPCB-208ENST00000498530 IGKV1-5P01602 117 aa3.13□□□□□ -1.91
PMPCB-208ENST00000498530 S100A1P23297 94 aa3.13□□□□□ -1.91
PMPCB-208ENST00000498530 CA5AP35218 305 aa3.13□□□□□ -1.91
PMPCB-208ENST00000498530 CRYBA4P53673 196 aa3.13□□□□□ -1.91
PMPCB-208ENST00000498530 HIST1H4AP62805 103 aaKnown RBP3.13□□□□□ -1.91
PMPCB-208ENST00000498530 KRTAP13-3Q3SY46 172 aa3.13□□□□□ -1.91
PMPCB-208ENST00000498530 CCDC153Q494R4 210 aa3.13□□□□□ -1.91
PMPCB-208ENST00000498530 DYNAPQ8N1N2 210 aa3.13□□□□□ -1.91
PMPCB-208ENST00000498530 LINC00304Q8N9R0 145 aa3.13□□□□□ -1.91
PMPCB-208ENST00000498530 C2orf50Q96LR7 162 aa3.13□□□□□ -1.91
PMPCB-208ENST00000498530 RNF122Q9H9V4 155 aa3.13□□□□□ -1.91
PMPCB-208ENST00000498530 RBM7Q9Y580 266 aaKnown RBP3.13□□□□□ -1.91
PMPCB-208ENST00000498530 ASCC3Q8N3C0 2202 aaKnown RBP3.13□□□□□ -1.91
PMPCB-208ENST00000498530 ARHGAP32A7KAX9 2087 aa3.13□□□□□ -1.91
PMPCB-208ENST00000498530 PCNX2A6NKB5 2137 aa3.13□□□□□ -1.91
PMPCB-208ENST00000498530 ROCK2O75116 1388 aaKnown RBP3.12□□□□□ -1.91
PMPCB-208ENST00000498530 SPTBN1Q01082 2364 aaKnown RBP3.12□□□□□ -1.91
PMPCB-208ENST00000498530 PLXNA4Q9HCM2 1894 aa3.12□□□□□ -1.91
PMPCB-208ENST00000498530 MYO16Q9Y6X6 1858 aa3.12□□□□□ -1.91
PMPCB-208ENST00000498530 CENPEQ02224 2701 aa3.12□□□□□ -1.91
PMPCB-208ENST00000498530 TRAPPC13A5PLN9 417 aa3.12□□□□□ -1.91
PMPCB-208ENST00000498530 ODF3BA8MYP8 253 aa3.12□□□□□ -1.91
PMPCB-208ENST00000498530 ATG12O94817 140 aa3.12□□□□□ -1.91
PMPCB-208ENST00000498530 IFNA10P01566 189 aa3.12□□□□□ -1.91
PMPCB-208ENST00000498530 ERP29P30040 261 aaKnown RBP3.12□□□□□ -1.91
PMPCB-208ENST00000498530 G6PCP35575 357 aa3.12□□□□□ -1.91
PMPCB-208ENST00000498530 SNCBQ16143 134 aa3.12□□□□□ -1.91
PMPCB-208ENST00000498530 ARHGAP11BQ3KRB8 267 aa3.12□□□□□ -1.91
PMPCB-208ENST00000498530 KRTAP21-3Q3LHN1 58 aa3.12□□□□□ -1.91
PMPCB-208ENST00000498530 AADACL3Q5VUY0 350 aa3.12□□□□□ -1.91
PMPCB-208ENST00000498530 TRIQKQ629K1 86 aa3.12□□□□□ -1.91
PMPCB-208ENST00000498530 Q6Q795 121 aa3.12□□□□□ -1.91
PMPCB-208ENST00000498530 OR4C16Q8NGL9 310 aa3.12□□□□□ -1.91
PMPCB-208ENST00000498530 DYDC1Q8WWB3 177 aa3.12□□□□□ -1.91
PMPCB-208ENST00000498530 GPR146Q96CH1 333 aa3.12□□□□□ -1.91
PMPCB-208ENST00000498530 CGREF1Q99674 301 aa3.12□□□□□ -1.91
PMPCB-208ENST00000498530 DERL1Q9BUN8 251 aa3.12□□□□□ -1.91
PMPCB-208ENST00000498530 SMPXQ9UHP9 88 aa3.12□□□□□ -1.91
PMPCB-208ENST00000498530 EML5Q05BV3 1969 aa3.12□□□□□ -1.91
PMPCB-208ENST00000498530 BIRC6Q9NR09 4857 aa3.11□□□□□ -1.91
PMPCB-208ENST00000498530 MYH13Q9UKX3 1938 aa3.11□□□□□ -1.91
PMPCB-208ENST00000498530 SDK2Q58EX2 2172 aa3.11□□□□□ -1.91
PMPCB-208ENST00000498530 MYH11P35749 1972 aa3.11□□□□□ -1.91
PMPCB-208ENST00000498530 SPAG17Q6Q759 2223 aa3.11□□□□□ -1.91
PMPCB-208ENST00000498530 EPPK1P58107 5090 aaKnown RBP3.11□□□□□ -1.91
PMPCB-208ENST00000498530 TRGV5A0A0B4J1U4 118 aa3.11□□□□□ -1.91
PMPCB-208ENST00000498530 A0A0J9YX75 114 aa3.11□□□□□ -1.91
PMPCB-208ENST00000498530 VPS37CA5D8V6 355 aaPredicted RBP3.11□□□□□ -1.91
PMPCB-208ENST00000498530 C11orf86A6NJI1 115 aa3.11□□□□□ -1.91
PMPCB-208ENST00000498530 S1PR2O95136 353 aa3.11□□□□□ -1.91
PMPCB-208ENST00000498530 RPSAP08865 295 aaKnown RBP3.11□□□□□ -1.91
PMPCB-208ENST00000498530 TFPTP0C1Z6 253 aa3.11□□□□□ -1.91
PMPCB-208ENST00000498530 GABRA4P48169 554 aa3.11□□□□□ -1.91
PMPCB-208ENST00000498530 RAB14P61106 215 aa3.11□□□□□ -1.91
PMPCB-208ENST00000498530 GNG3P63215 75 aa3.11□□□□□ -1.91
PMPCB-208ENST00000498530 SPCS2Q15005 226 aa3.11□□□□□ -1.91
PMPCB-208ENST00000498530 NDUFA5Q16718 116 aa3.11□□□□□ -1.91
PMPCB-208ENST00000498530 LCE3AQ5TA76 89 aa3.11□□□□□ -1.91
PMPCB-208ENST00000498530 TMPPEQ6ZT21 453 aa3.11□□□□□ -1.91
PMPCB-208ENST00000498530 H1FXQ92522 213 aaKnown RBP3.11□□□□□ -1.91
PMPCB-208ENST00000498530 FGF13Q92913 245 aa3.11□□□□□ -1.91
PMPCB-208ENST00000498530 OR8D2Q9GZM6 311 aa3.11□□□□□ -1.91
PMPCB-208ENST00000498530 TVP23BQ9NYZ1 205 aa3.11□□□□□ -1.91
PMPCB-208ENST00000498530 TP73-AS1Q9UF72 201 aa3.11□□□□□ -1.91
PMPCB-208ENST00000498530 MED13Q9UHV7 2174 aa3.11□□□□□ -1.91
PMPCB-208ENST00000498530 ZNF106Q9H2Y7 1883 aaKnown RBP3.1□□□□□ -1.91
PMPCB-208ENST00000498530 IRGMA1A4Y4 181 aa3.1□□□□□ -1.91
PMPCB-208ENST00000498530 FABP5P3A8MUU1 101 aa3.1□□□□□ -1.91
PMPCB-208ENST00000498530 CIAO1O76071 339 aa3.1□□□□□ -1.91
PMPCB-208ENST00000498530 CTSGP08311 255 aa3.1□□□□□ -1.91
PMPCB-208ENST00000498530 SULT1A3P0DMM9 295 aa3.1□□□□□ -1.91
PMPCB-208ENST00000498530 SULT1A4P0DMN0 295 aa3.1□□□□□ -1.91
PMPCB-208ENST00000498530 FOXF1Q12946 379 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms