RNA–Protein interactions for RNA: ENST00000498020.1

HLA-DMB-262, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 4,569 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-262ENST00000498020 K7ERU9 68 aa6.5□□□□□ -1.37
HLA-DMB-262ENST00000498020 TIMM23O14925 209 aa6.5□□□□□ -1.37
HLA-DMB-262ENST00000498020 CD69Q07108 199 aa6.5□□□□□ -1.37
HLA-DMB-262ENST00000498020 PRSS8Q16651 343 aa6.5□□□□□ -1.37
HLA-DMB-262ENST00000498020 GCSAMLQ5JQS6 135 aa6.5□□□□□ -1.37
HLA-DMB-262ENST00000498020 FAM120AOSQ5T036 256 aa6.5□□□□□ -1.37
HLA-DMB-262ENST00000498020 GEMIN7Q9H840 131 aaKnown RBP6.5□□□□□ -1.37
HLA-DMB-262ENST00000498020 IGHV4-61A0A0C4DH41 118 aa6.49□□□□□ -1.37
HLA-DMB-262ENST00000498020 H3BTX0 84 aa6.49□□□□□ -1.37
HLA-DMB-262ENST00000498020 NBEAP1P0C6P0 100 aa6.49□□□□□ -1.37
HLA-DMB-262ENST00000498020 ATP5G3P48201 142 aa6.49□□□□□ -1.37
HLA-DMB-262ENST00000498020 COL5A1-AS1Q5SY13 56 aa6.49□□□□□ -1.37
HLA-DMB-262ENST00000498020 FAM74A4Q5TZK3 123 aa6.49□□□□□ -1.37
HLA-DMB-262ENST00000498020 LCNL1Q6ZST4 164 aa6.49□□□□□ -1.37
HLA-DMB-262ENST00000498020 MGST2Q99735 147 aa6.49□□□□□ -1.37
HLA-DMB-262ENST00000498020 MRPL18Q9H0U6 180 aaKnown RBP6.49□□□□□ -1.37
HLA-DMB-262ENST00000498020 C21orf62Q9NYP8 219 aa6.49□□□□□ -1.37
HLA-DMB-262ENST00000498020 H0YJW9 148 aa6.49□□□□□ -1.37
HLA-DMB-262ENST00000498020 H7C1H1 209 aa6.49□□□□□ -1.37
HLA-DMB-262ENST00000498020 ANKRD17O75179 2603 aaKnown RBP6.49□□□□□ -1.37
HLA-DMB-262ENST00000498020 MOSP00540 346 aa6.49□□□□□ -1.37
HLA-DMB-262ENST00000498020 ZNF25P17030 456 aaPredicted RBP6.49□□□□□ -1.37
HLA-DMB-262ENST00000498020 ZNF56Q15929 161 aa6.49□□□□□ -1.37
HLA-DMB-262ENST00000498020 VWC2Q2TAL6 325 aa6.49□□□□□ -1.37
HLA-DMB-262ENST00000498020 ZNF295-AS1Q8N0V1 137 aa6.49□□□□□ -1.37
HLA-DMB-262ENST00000498020 TMEM167AQ8TBQ9 72 aa6.49□□□□□ -1.37
HLA-DMB-262ENST00000498020 PSMB11A5LHX3 300 aa6.49□□□□□ -1.37
HLA-DMB-262ENST00000498020 EIF4EBP1Q13541 118 aaPredicted RBP6.49□□□□□ -1.37
HLA-DMB-262ENST00000498020 GTSCR1Q86UQ5 136 aa6.49□□□□□ -1.37
HLA-DMB-262ENST00000498020 LOC107984156A0A0G2JMH3 177 aa6.49□□□□□ -1.37
HLA-DMB-262ENST00000498020 AMY1AP04745 511 aa6.49□□□□□ -1.37
HLA-DMB-262ENST00000498020 RPLP1P05386 114 aaKnown RBP6.49□□□□□ -1.37
HLA-DMB-262ENST00000498020 CGB3P0DN86 165 aa6.49□□□□□ -1.37
HLA-DMB-262ENST00000498020 CGB7P0DN87 165 aa6.49□□□□□ -1.37
HLA-DMB-262ENST00000498020 SRIP30626 198 aa6.49□□□□□ -1.37
HLA-DMB-262ENST00000498020 CDX1P47902 265 aaPredicted RBP6.49□□□□□ -1.37
HLA-DMB-262ENST00000498020 EFNB3Q15768 340 aa6.49□□□□□ -1.37
HLA-DMB-262ENST00000498020 LINC00305Q7Z4B0 112 aa6.49□□□□□ -1.37
HLA-DMB-262ENST00000498020 ARL17AQ8IVW1 177 aa6.49□□□□□ -1.37
HLA-DMB-262ENST00000498020 SGK494Q96LW2 274 aa6.49□□□□□ -1.37
HLA-DMB-262ENST00000498020 NEU1Q99519 415 aa6.49□□□□□ -1.37
HLA-DMB-262ENST00000498020 FBXL7Q9UJT9 491 aa6.49□□□□□ -1.37
HLA-DMB-262ENST00000498020 TRBV24-1A0A075B6N3 115 aa6.48□□□□□ -1.37
HLA-DMB-262ENST00000498020 TRBV9A0A0B4J1U6 114 aa6.48□□□□□ -1.37
HLA-DMB-262ENST00000498020 FBLL1A6NHQ2 334 aaKnown RBP6.48□□□□□ -1.37
HLA-DMB-262ENST00000498020 PMS2P5A8MQ11 134 aa6.48□□□□□ -1.37
HLA-DMB-262ENST00000498020 MMP23AO75900 390 aa6.48□□□□□ -1.37
HLA-DMB-262ENST00000498020 HLA-DRB1P01911 266 aa6.48□□□□□ -1.37
HLA-DMB-262ENST00000498020 IGHV1-8P0DP01 117 aa6.48□□□□□ -1.37
HLA-DMB-262ENST00000498020 LYPD2Q6UXB3 125 aa6.48□□□□□ -1.37
HLA-DMB-262ENST00000498020 WDFY4Q6ZS81 3184 aa6.48□□□□□ -1.37
HLA-DMB-262ENST00000498020 PPP1R17O96001 155 aa6.48□□□□□ -1.37
HLA-DMB-262ENST00000498020 IGHV4-39P01824 125 aa6.48□□□□□ -1.37
HLA-DMB-262ENST00000498020 IGKV1-16P04430 117 aa6.48□□□□□ -1.37
HLA-DMB-262ENST00000498020 LGALS3P17931 250 aaKnown RBP6.48□□□□□ -1.37
HLA-DMB-262ENST00000498020 ZNF833PQ6ZTB9 187 aa6.48□□□□□ -1.37
HLA-DMB-262ENST00000498020 VMO1Q7Z5L0 202 aa6.48□□□□□ -1.37
HLA-DMB-262ENST00000498020 LINC00311Q8N616 119 aa6.48□□□□□ -1.37
HLA-DMB-262ENST00000498020 TEX45Q8NA69 505 aa6.48□□□□□ -1.37
HLA-DMB-262ENST00000498020 OR1P1Q8NH06 330 aa6.48□□□□□ -1.37
HLA-DMB-262ENST00000498020 SCRT1Q9BWW7 348 aa6.48□□□□□ -1.37
HLA-DMB-262ENST00000498020 YLPM1P49750 1951 aaKnown RBP6.48□□□□□ -1.37
HLA-DMB-262ENST00000498020 TRBV20OR9-2A0A075B6H5 130 aa6.48□□□□□ -1.37
HLA-DMB-262ENST00000498020 NDUFS6O75380 124 aaKnown RBP6.48□□□□□ -1.37
HLA-DMB-262ENST00000498020 BRWD1-AS2P59051 145 aa6.48□□□□□ -1.37
HLA-DMB-262ENST00000498020 TMEM155Q4W5P6 130 aa6.48□□□□□ -1.37
HLA-DMB-262ENST00000498020 MEIG1Q5JSS6 88 aa6.48□□□□□ -1.37
HLA-DMB-262ENST00000498020 C1orf122Q6ZSJ8 110 aa6.48□□□□□ -1.37
HLA-DMB-262ENST00000498020 KAAG1Q9UBP8 84 aa6.48□□□□□ -1.37
HLA-DMB-262ENST00000498020 DOCK11Q5JSL3 2073 aa6.47□□□□□ -1.37
HLA-DMB-262ENST00000498020 UBE2CO00762 179 aa6.47□□□□□ -1.37
HLA-DMB-262ENST00000498020 HOXA3O43365 443 aaPredicted RBP6.47□□□□□ -1.37
HLA-DMB-262ENST00000498020 PROP1O75360 226 aa6.47□□□□□ -1.37
HLA-DMB-262ENST00000498020 PPP1R27Q86WC6 154 aa6.47□□□□□ -1.37
HLA-DMB-262ENST00000498020 UBE2DNLQ8IWF7 75 aa6.47□□□□□ -1.37
HLA-DMB-262ENST00000498020 OR5AN1Q8NGI8 311 aa6.47□□□□□ -1.37
HLA-DMB-262ENST00000498020 KLK15Q9H2R5 256 aa6.47□□□□□ -1.37
HLA-DMB-262ENST00000498020 LY6G6DO95868 133 aa6.47□□□□□ -1.37
HLA-DMB-262ENST00000498020 IGHV3-23P01764 117 aa6.47□□□□□ -1.37
HLA-DMB-262ENST00000498020 CENPWQ5EE01 88 aa6.47□□□□□ -1.37
HLA-DMB-262ENST00000498020 SAMD13Q5VXD3 122 aa6.47□□□□□ -1.37
HLA-DMB-262ENST00000498020 SLC25A34Q6PIV7 304 aa6.47□□□□□ -1.37
HLA-DMB-262ENST00000498020 MIR17HGQ75NE6 70 aa6.47□□□□□ -1.37
HLA-DMB-262ENST00000498020 GPR61Q9BZJ8 451 aa6.47□□□□□ -1.37
HLA-DMB-262ENST00000498020 MRPS16Q9Y3D3 137 aaKnown RBP6.47□□□□□ -1.37
HLA-DMB-262ENST00000498020 ZNF292O60281 2723 aa6.47□□□□□ -1.37
HLA-DMB-262ENST00000498020 C9JCJ5 164 aa6.47□□□□□ -1.37
HLA-DMB-262ENST00000498020 CXCL1P09341 107 aa6.47□□□□□ -1.37
HLA-DMB-262ENST00000498020 HOXA5P20719 270 aa6.47□□□□□ -1.37
HLA-DMB-262ENST00000498020 TCTAP57738 103 aa6.47□□□□□ -1.37
HLA-DMB-262ENST00000498020 KIAA1644Q3SXP7 199 aa6.47□□□□□ -1.37
HLA-DMB-262ENST00000498020 ARPC1AQ92747 370 aa6.47□□□□□ -1.37
HLA-DMB-262ENST00000498020 SFRP2Q96HF1 295 aa6.47□□□□□ -1.37
HLA-DMB-262ENST00000498020 HIST1H4GQ99525 98 aa6.47□□□□□ -1.37
HLA-DMB-262ENST00000498020 UQCR10Q9UDW1 63 aa6.47□□□□□ -1.37
HLA-DMB-262ENST00000498020 ARHGAP21Q5T5U3 1957 aa6.47□□□□□ -1.37
HLA-DMB-262ENST00000498020 H7C2G1 150 aa6.47□□□□□ -1.37
HLA-DMB-262ENST00000498020 FABP2P12104 132 aa6.47□□□□□ -1.37
HLA-DMB-262ENST00000498020 MYOD1P15172 320 aa6.47□□□□□ -1.37
HLA-DMB-262ENST00000498020 LOXP28300 417 aaPredicted RBP6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms