RNA–Protein interactions for RNA: ENST00000497597.5

TRAPPC12-223, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 3,401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-223ENST00000497597 PATE3B3GLJ2 98 aa8.57□□□□□ -1.04
TRAPPC12-223ENST00000497597 DLL1O00548 723 aa8.57□□□□□ -1.04
TRAPPC12-223ENST00000497597 RNASE2P10153 161 aaKnown RBP8.57□□□□□ -1.04
TRAPPC12-223ENST00000497597 FOXC2Q99958 501 aa8.57□□□□□ -1.04
TRAPPC12-223ENST00000497597 GATA3P23771 443 aa8.57□□□□□ -1.04
TRAPPC12-223ENST00000497597 TMPRSS3P57727 454 aa8.57□□□□□ -1.04
TRAPPC12-223ENST00000497597 TWIST1Q15672 202 aa8.57□□□□□ -1.04
TRAPPC12-223ENST00000497597 CCDC144NLQ6NUI1 221 aa8.57□□□□□ -1.04
TRAPPC12-223ENST00000497597 OR4X2Q8NGF9 303 aa8.57□□□□□ -1.04
TRAPPC12-223ENST00000497597 OR10X1Q8NGY0 326 aa8.57□□□□□ -1.04
TRAPPC12-223ENST00000497597 VGLL1Q99990 258 aa8.57□□□□□ -1.04
TRAPPC12-223ENST00000497597 C20orf78Q9BR46 151 aa8.57□□□□□ -1.04
TRAPPC12-223ENST00000497597 DUSP23Q9BVJ7 150 aa8.57□□□□□ -1.04
TRAPPC12-223ENST00000497597 LINC00470Q9BZP3 86 aa8.57□□□□□ -1.04
TRAPPC12-223ENST00000497597 MRPL36Q9P0J6 103 aaKnown RBP8.57□□□□□ -1.04
TRAPPC12-223ENST00000497597 COL4A2P08572 1712 aa8.57□□□□□ -1.04
TRAPPC12-223ENST00000497597 UPK2O00526 184 aa8.56□□□□□ -1.04
TRAPPC12-223ENST00000497597 KIR2DS2P43631 304 aa8.56□□□□□ -1.04
TRAPPC12-223ENST00000497597 PRCDQ00LT1 54 aa8.56□□□□□ -1.04
TRAPPC12-223ENST00000497597 PATE2Q6UY27 113 aa8.56□□□□□ -1.04
TRAPPC12-223ENST00000497597 NEGR1Q7Z3B1 354 aa8.56□□□□□ -1.04
TRAPPC12-223ENST00000497597 CREBBPQ92793 2442 aa8.56□□□□□ -1.04
TRAPPC12-223ENST00000497597 TRGV8A0A0C4DH27 118 aa8.56□□□□□ -1.04
TRAPPC12-223ENST00000497597 C15orf65H3BRN8 121 aa8.56□□□□□ -1.04
TRAPPC12-223ENST00000497597 M0R3E3 92 aa8.56□□□□□ -1.04
TRAPPC12-223ENST00000497597 SPINK8P0C7L1 97 aa8.56□□□□□ -1.04
TRAPPC12-223ENST00000497597 SUB1P53999 127 aaKnown RBP eCLIP8.56□□□□□ -1.04
TRAPPC12-223ENST00000497597 EIF4EBP1Q13541 118 aaPredicted RBP8.56□□□□□ -1.04
TRAPPC12-223ENST00000497597 PLGLAQ15195 96 aa8.56□□□□□ -1.04
TRAPPC12-223ENST00000497597 FAM231DQ6ZW35 169 aa8.56□□□□□ -1.04
TRAPPC12-223ENST00000497597 ITLN1Q8WWA0 313 aa8.56□□□□□ -1.04
TRAPPC12-223ENST00000497597 FXYD5Q96DB9 178 aa8.56□□□□□ -1.04
TRAPPC12-223ENST00000497597 CHAC1Q9BUX1 264 aa8.56□□□□□ -1.04
TRAPPC12-223ENST00000497597 INSIG2Q9Y5U4 225 aa8.56□□□□□ -1.04
TRAPPC12-223ENST00000497597 A0A1B0GXF2 115 aa8.55□□□□□ -1.04
TRAPPC12-223ENST00000497597 APOMO95445 188 aa8.55□□□□□ -1.04
TRAPPC12-223ENST00000497597 IGLV3-19P01714 112 aa8.55□□□□□ -1.04
TRAPPC12-223ENST00000497597 TCRAP04437 139 aa8.55□□□□□ -1.04
TRAPPC12-223ENST00000497597 MEOX1P50221 254 aa8.55□□□□□ -1.04
TRAPPC12-223ENST00000497597 GAGE13Q4V321 117 aa8.55□□□□□ -1.04
TRAPPC12-223ENST00000497597 FAM216BQ8N7L0 139 aa8.55□□□□□ -1.04
TRAPPC12-223ENST00000497597 DEFB104AQ8WTQ1 72 aa8.55□□□□□ -1.04
TRAPPC12-223ENST00000497597 SPAG8Q99932 426 aaPredicted RBP8.55□□□□□ -1.04
TRAPPC12-223ENST00000497597 MRPL20Q9BYC9 149 aaKnown RBP8.55□□□□□ -1.04
TRAPPC12-223ENST00000497597 TMEM14BQ9NUH8 114 aa8.55□□□□□ -1.04
TRAPPC12-223ENST00000497597 FOXA2Q9Y261 457 aaPredicted RBP8.55□□□□□ -1.04
TRAPPC12-223ENST00000497597 SPTAN1Q13813 2472 aaKnown RBP8.55□□□□□ -1.04
TRAPPC12-223ENST00000497597 E7EUB6 86 aa8.55□□□□□ -1.04
TRAPPC12-223ENST00000497597 TNFRSF1AP19438 455 aa8.55□□□□□ -1.04
TRAPPC12-223ENST00000497597 MC5RP33032 325 aa8.55□□□□□ -1.04
TRAPPC12-223ENST00000497597 SYT8Q8NBV8 401 aa8.55□□□□□ -1.04
TRAPPC12-223ENST00000497597 OR9G4Q8NGQ1 327 aa8.55□□□□□ -1.04
TRAPPC12-223ENST00000497597 SIGLEC8Q9NYZ4 499 aa8.55□□□□□ -1.04
TRAPPC12-223ENST00000497597 NCKAP5O14513 1909 aa8.55□□□□□ -1.04
TRAPPC12-223ENST00000497597 NOTCH3Q9UM47 2321 aa8.55□□□□□ -1.04
TRAPPC12-223ENST00000497597 IGKV1D-17A0A075B6S4 117 aa8.55□□□□□ -1.04
TRAPPC12-223ENST00000497597 IGHV3OR16-8A0A075B7F1 116 aa8.55□□□□□ -1.04
TRAPPC12-223ENST00000497597 FNDC10F2Z333 226 aa8.55□□□□□ -1.04
TRAPPC12-223ENST00000497597 ZC2HC1BQ5TFG8 222 aa8.55□□□□□ -1.04
TRAPPC12-223ENST00000497597 HBDP02042 147 aa8.54□□□□□ -1.04
TRAPPC12-223ENST00000497597 OR5AN1Q8NGI8 311 aa8.54□□□□□ -1.04
TRAPPC12-223ENST00000497597 RPUSD1Q9UJJ7 312 aaKnown RBP8.54□□□□□ -1.04
TRAPPC12-223ENST00000497597 CRXO43186 299 aaPredicted RBP8.54□□□□□ -1.04
TRAPPC12-223ENST00000497597 SCGB2A1O75556 95 aa8.54□□□□□ -1.04
TRAPPC12-223ENST00000497597 CNIH1O95406 144 aa8.54□□□□□ -1.04
TRAPPC12-223ENST00000497597 ZNF766Q5HY98 468 aa8.54□□□□□ -1.04
TRAPPC12-223ENST00000497597 C11orf53Q8IXP5 236 aa8.54□□□□□ -1.04
TRAPPC12-223ENST00000497597 NDUFA3O95167 84 aa8.54□□□□□ -1.04
TRAPPC12-223ENST00000497597 KIR2DL2P43627 348 aaPredicted RBP8.54□□□□□ -1.04
TRAPPC12-223ENST00000497597 IL11RAQ14626 422 aa8.54□□□□□ -1.04
TRAPPC12-223ENST00000497597 IGHV3-35A0A0C4DH35 117 aa8.53□□□□□ -1.04
TRAPPC12-223ENST00000497597 TCRBV4S1A1TA0A5B7 111 aa8.53□□□□□ -1.04
TRAPPC12-223ENST00000497597 M0R1B8 84 aa8.53□□□□□ -1.04
TRAPPC12-223ENST00000497597 ORM1P02763 201 aa8.53□□□□□ -1.04
TRAPPC12-223ENST00000497597 CCL3L1P16619 93 aa8.53□□□□□ -1.04
TRAPPC12-223ENST00000497597 IGHV1-2P23083 117 aa8.53□□□□□ -1.04
TRAPPC12-223ENST00000497597 LTBRP36941 435 aa8.53□□□□□ -1.04
TRAPPC12-223ENST00000497597 SPRNQ5BIV9 151 aa8.53□□□□□ -1.04
TRAPPC12-223ENST00000497597 MRPS17Q9Y2R5 130 aaKnown RBP8.53□□□□□ -1.04
TRAPPC12-223ENST00000497597 IGKV3D-15A0A087WSY6 115 aa8.53□□□□□ -1.04
TRAPPC12-223ENST00000497597 IGKV2D-26A0A0A0MRZ7 120 aa8.53□□□□□ -1.04
TRAPPC12-223ENST00000497597 IQCF6A8MYZ5 107 aa8.53□□□□□ -1.04
TRAPPC12-223ENST00000497597 NPIPB6E9PJ23 425 aa8.53□□□□□ -1.04
TRAPPC12-223ENST00000497597 LEPP41159 167 aa8.53□□□□□ -1.04
TRAPPC12-223ENST00000497597 PSMB2P49721 201 aa8.53□□□□□ -1.04
TRAPPC12-223ENST00000497597 LYZL1Q6UWQ5 148 aa8.53□□□□□ -1.04
TRAPPC12-223ENST00000497597 ORMDL3Q8N138 153 aa8.53□□□□□ -1.04
TRAPPC12-223ENST00000497597 NDFIP1Q9BT67 221 aa8.53□□□□□ -1.04
TRAPPC12-223ENST00000497597 PTPRZ1P23471 2315 aaPredicted RBP8.53□□□□□ -1.04
TRAPPC12-223ENST00000497597 CXCL12P48061 93 aa8.52□□□□□ -1.04
TRAPPC12-223ENST00000497597 BOD1L2Q8IYS8 172 aa8.52□□□□□ -1.04
TRAPPC12-223ENST00000497597 RPRMLQ8N4K4 120 aa8.52□□□□□ -1.04
TRAPPC12-223ENST00000497597 GLMPQ8WWB7 406 aa8.52□□□□□ -1.04
TRAPPC12-223ENST00000497597 PTH2Q96A98 100 aa8.52□□□□□ -1.04
TRAPPC12-223ENST00000497597 C17orf77Q96MU5 243 aa8.52□□□□□ -1.04
TRAPPC12-223ENST00000497597 MALRD1Q5VYJ5 2156 aa8.52□□□□□ -1.05
TRAPPC12-223ENST00000497597 TRGV5A0A0B4J1U4 118 aa8.52□□□□□ -1.05
TRAPPC12-223ENST00000497597 TMEM189A5PLL7 270 aa8.52□□□□□ -1.05
TRAPPC12-223ENST00000497597 H7C2G1 150 aa8.52□□□□□ -1.05
TRAPPC12-223ENST00000497597 SMIM17P0DL12 118 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms