RNA–Protein interactions for RNA: ENST00000493903.1

GTF3A-208, Transcript of general transcription factor IIIA, humanhuman

TSL 3

Gene GTF3A, Length 748 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-208ENST00000493903 IL36BQ9NZH7 164 aa2.46□□□□□ -2.02
GTF3A-208ENST00000493903 UFC1Q9Y3C8 167 aa2.46□□□□□ -2.02
GTF3A-208ENST00000493903 ANKRD17O75179 2603 aaKnown RBP2.46□□□□□ -2.02
GTF3A-208ENST00000493903 USP9XQ93008 2570 aaPredicted RBP2.46□□□□□ -2.02
GTF3A-208ENST00000493903 URB1O60287 2271 aaKnown RBP2.45□□□□□ -2.02
GTF3A-208ENST00000493903 MYO9AB2RTY4 2548 aa2.45□□□□□ -2.02
GTF3A-208ENST00000493903 DENND4CQ5VZ89 1909 aa2.45□□□□□ -2.02
GTF3A-208ENST00000493903 GNG14A0A1W2PPG7 69 aa2.45□□□□□ -2.02
GTF3A-208ENST00000493903 TXNDC9O14530 226 aa2.45□□□□□ -2.02
GTF3A-208ENST00000493903 S1PR2O95136 353 aa2.45□□□□□ -2.02
GTF3A-208ENST00000493903 UCHL1P09936 223 aa2.45□□□□□ -2.02
GTF3A-208ENST00000493903 CBR1P16152 277 aa2.45□□□□□ -2.02
GTF3A-208ENST00000493903 SPI1P17947 270 aa2.45□□□□□ -2.02
GTF3A-208ENST00000493903 AZU1P20160 251 aa2.45□□□□□ -2.02
GTF3A-208ENST00000493903 SERPINB1P30740 379 aa2.45□□□□□ -2.02
GTF3A-208ENST00000493903 DEFA1P59665 94 aa2.45□□□□□ -2.02
GTF3A-208ENST00000493903 AKR1C8PQ5T2L2 129 aa2.45□□□□□ -2.02
GTF3A-208ENST00000493903 C2orf91Q6ZV80 131 aa2.45□□□□□ -2.02
GTF3A-208ENST00000493903 GRINAQ7Z429 371 aa2.45□□□□□ -2.02
GTF3A-208ENST00000493903 SMIM20Q8N5G0 67 aa2.45□□□□□ -2.02
GTF3A-208ENST00000493903 IGF2BP2-AS1Q96M15 143 aa2.45□□□□□ -2.02
GTF3A-208ENST00000493903 SH3BGRL3Q9H299 93 aa2.45□□□□□ -2.02
GTF3A-208ENST00000493903 RNF122Q9H9V4 155 aa2.45□□□□□ -2.02
GTF3A-208ENST00000493903 LYRM2Q9NU23 88 aaPredicted RBP2.45□□□□□ -2.02
GTF3A-208ENST00000493903 TVP23BQ9NYZ1 205 aa2.45□□□□□ -2.02
GTF3A-208ENST00000493903 PRNDQ9UKY0 176 aa2.45□□□□□ -2.02
GTF3A-208ENST00000493903 FAM215AQ9Y5M1 114 aa2.45□□□□□ -2.02
GTF3A-208ENST00000493903 COL6A6A6NMZ7 2263 aa2.45□□□□□ -2.02
GTF3A-208ENST00000493903 RELNP78509 3460 aa2.45□□□□□ -2.02
GTF3A-208ENST00000493903 PIEZO2Q9H5I5 2752 aa2.44□□□□□ -2.02
GTF3A-208ENST00000493903 TRBV19A0A075B6N1 114 aa2.44□□□□□ -2.02
GTF3A-208ENST00000493903 A0A1W2PQD3 144 aa2.44□□□□□ -2.02
GTF3A-208ENST00000493903 J3QRK9 145 aa2.44□□□□□ -2.02
GTF3A-208ENST00000493903 AIPO00170 330 aa2.44□□□□□ -2.02
GTF3A-208ENST00000493903 LEPROTO15243 131 aa2.44□□□□□ -2.02
GTF3A-208ENST00000493903 HMGB3O15347 200 aaKnown RBP2.44□□□□□ -2.02
GTF3A-208ENST00000493903 IGKV1-5P01602 117 aa2.44□□□□□ -2.02
GTF3A-208ENST00000493903 CXCL8P10145 99 aa2.44□□□□□ -2.02
GTF3A-208ENST00000493903 ALDH3A1P30838 453 aa2.44□□□□□ -2.02
GTF3A-208ENST00000493903 CA5AP35218 305 aa2.44□□□□□ -2.02
GTF3A-208ENST00000493903 TNFRSF9Q07011 255 aa2.44□□□□□ -2.02
GTF3A-208ENST00000493903 MOGQ16653 247 aa2.44□□□□□ -2.02
GTF3A-208ENST00000493903 DEFB134Q4QY38 66 aa2.44□□□□□ -2.02
GTF3A-208ENST00000493903 Q6Q795 121 aa2.44□□□□□ -2.02
GTF3A-208ENST00000493903 STX19Q8N4C7 294 aa2.44□□□□□ -2.02
GTF3A-208ENST00000493903 DEFB119Q8N690 84 aa2.44□□□□□ -2.02
GTF3A-208ENST00000493903 H1FXQ92522 213 aaKnown RBP2.44□□□□□ -2.02
GTF3A-208ENST00000493903 PKMYT1Q99640 499 aa2.44□□□□□ -2.02
GTF3A-208ENST00000493903 DERL1Q9BUN8 251 aa2.44□□□□□ -2.02
GTF3A-208ENST00000493903 TTTY13Q9BZ97 58 aa2.44□□□□□ -2.02
GTF3A-208ENST00000493903 SPENQ96T58 3664 aaKnown RBP2.44□□□□□ -2.02
GTF3A-208ENST00000493903 LRRK2Q5S007 2527 aa2.44□□□□□ -2.02
GTF3A-208ENST00000493903 TEP1Q99973 2627 aaKnown RBP2.44□□□□□ -2.02
GTF3A-208ENST00000493903 BOD1L1Q8NFC6 3051 aa2.44□□□□□ -2.02
GTF3A-208ENST00000493903 FLNCQ14315 2725 aa2.44□□□□□ -2.02
GTF3A-208ENST00000493903 PI4KAP42356 2102 aa2.44□□□□□ -2.02
GTF3A-208ENST00000493903 ANAPC1Q9H1A4 1944 aa2.43□□□□□ -2.02
GTF3A-208ENST00000493903 CITO14578 2027 aa2.43□□□□□ -2.02
GTF3A-208ENST00000493903 TRAV38-1A0A0B4J264 116 aa2.43□□□□□ -2.02
GTF3A-208ENST00000493903 TRAV4A0A0B4J268 109 aa2.43□□□□□ -2.02
GTF3A-208ENST00000493903 A0A0J9YW62 118 aa2.43□□□□□ -2.02
GTF3A-208ENST00000493903 IRGMA1A4Y4 181 aa2.43□□□□□ -2.02
GTF3A-208ENST00000493903 G3V2T6 193 aa2.43□□□□□ -2.02
GTF3A-208ENST00000493903 RTL8CO15255 209 aa2.43□□□□□ -2.02
GTF3A-208ENST00000493903 IFNA21P01568 189 aa2.43□□□□□ -2.02
GTF3A-208ENST00000493903 LGALS1P09382 135 aaKnown RBP2.43□□□□□ -2.02
GTF3A-208ENST00000493903 HLA-EP13747 358 aa2.43□□□□□ -2.02
GTF3A-208ENST00000493903 IDO1P14902 403 aa2.43□□□□□ -2.02
GTF3A-208ENST00000493903 PHBP35232 272 aa2.43□□□□□ -2.02
GTF3A-208ENST00000493903 GABRA4P48169 554 aa2.43□□□□□ -2.02
GTF3A-208ENST00000493903 RPL18Q07020 188 aaKnown RBP2.43□□□□□ -2.02
GTF3A-208ENST00000493903 AADACL3Q5VUY0 350 aa2.43□□□□□ -2.02
GTF3A-208ENST00000493903 OR10D4PQ8NGN7 298 aa2.43□□□□□ -2.02
GTF3A-208ENST00000493903 TEX47Q8TBZ9 253 aa2.43□□□□□ -2.02
GTF3A-208ENST00000493903 TM2D3Q9BRN9 247 aa2.43□□□□□ -2.02
GTF3A-208ENST00000493903 TMEM70Q9BUB7 260 aa2.43□□□□□ -2.02
GTF3A-208ENST00000493903 MIXL1Q9H2W2 232 aa2.43□□□□□ -2.02
GTF3A-208ENST00000493903 MRPL16Q9NX20 251 aaKnown RBP2.43□□□□□ -2.02
GTF3A-208ENST00000493903 CYSLTR1Q9Y271 337 aa2.43□□□□□ -2.02
GTF3A-208ENST00000493903 HSPE1-MOB4S4R3N1 261 aa2.43□□□□□ -2.02
GTF3A-208ENST00000493903 CEP192Q8TEP8 1941 aa2.42□□□□□ -2.02
GTF3A-208ENST00000493903 PLXNB1O43157 2135 aa2.42□□□□□ -2.02
GTF3A-208ENST00000493903 USP9YO00507 2555 aaPredicted RBP2.42□□□□□ -2.02
GTF3A-208ENST00000493903 SPTAN1Q13813 2472 aaKnown RBP2.42□□□□□ -2.02
GTF3A-208ENST00000493903 SHANK1Q9Y566 2161 aa2.42□□□□□ -2.02
GTF3A-208ENST00000493903 SHROOM3Q8TF72 1996 aa2.42□□□□□ -2.02
GTF3A-208ENST00000493903 IGKV1D-43A0A0B4J1Z2 117 aa2.42□□□□□ -2.02
GTF3A-208ENST00000493903 SIGLEC16A6NMB1 481 aa2.42□□□□□ -2.02
GTF3A-208ENST00000493903 FABP5P3A8MUU1 101 aa2.42□□□□□ -2.02
GTF3A-208ENST00000493903 C10orf142B7Z368 130 aa2.42□□□□□ -2.02
GTF3A-208ENST00000493903 HCRTO43612 131 aa2.42□□□□□ -2.02
GTF3A-208ENST00000493903 NDUFC2O95298 119 aa2.42□□□□□ -2.02
GTF3A-208ENST00000493903 IFNA7P01567 189 aa2.42□□□□□ -2.02
GTF3A-208ENST00000493903 IGLV3-19P01714 112 aa2.42□□□□□ -2.02
GTF3A-208ENST00000493903 APODP05090 189 aa2.42□□□□□ -2.02
GTF3A-208ENST00000493903 RPSAP08865 295 aaKnown RBP2.42□□□□□ -2.02
GTF3A-208ENST00000493903 ZNF728P0DKX0 622 aa2.42□□□□□ -2.02
GTF3A-208ENST00000493903 GZMHP20718 246 aa2.42□□□□□ -2.02
GTF3A-208ENST00000493903 G6PCP35575 357 aa2.42□□□□□ -2.02
GTF3A-208ENST00000493903 NCALDP61601 193 aa2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms