RNA–Protein interactions for RNA: ENST00000492449.5

VPS8-225, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 1 (best)

Gene VPS8, Length 2,980 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-225ENST00000492449 GAGE2DQ9UEU5 116 aa7.74□□□□□ -1.17
VPS8-225ENST00000492449 PGPA6NDG6 321 aa7.74□□□□□ -1.17
VPS8-225ENST00000492449 D6R8Y8 96 aa7.74□□□□□ -1.17
VPS8-225ENST00000492449 TCRAP04437 139 aa7.74□□□□□ -1.17
VPS8-225ENST00000492449 CD27P26842 260 aa7.74□□□□□ -1.17
VPS8-225ENST00000492449 UBE2D3P61077 147 aa7.74□□□□□ -1.17
VPS8-225ENST00000492449 UBE2D2P62837 147 aa7.74□□□□□ -1.17
VPS8-225ENST00000492449 C5orf47Q569G3 176 aa7.74□□□□□ -1.17
VPS8-225ENST00000492449 ORMDL3Q8N138 153 aa7.74□□□□□ -1.17
VPS8-225ENST00000492449 TTTY13Q9BZ97 58 aa7.74□□□□□ -1.17
VPS8-225ENST00000492449 REV3LO60673 3130 aa7.74□□□□□ -1.17
VPS8-225ENST00000492449 SPINT2O43291 252 aa7.74□□□□□ -1.17
VPS8-225ENST00000492449 WIPF1O43516 503 aa7.74□□□□□ -1.17
VPS8-225ENST00000492449 TNFRSF1AP19438 455 aa7.74□□□□□ -1.17
VPS8-225ENST00000492449 YRDCQ86U90 279 aaKnown RBP7.74□□□□□ -1.17
VPS8-225ENST00000492449 NRGNQ92686 78 aa7.74□□□□□ -1.17
VPS8-225ENST00000492449 MDFICQ9P1T7 246 aa7.74□□□□□ -1.17
VPS8-225ENST00000492449 VCANP13611 3396 aa7.73□□□□□ -1.17
VPS8-225ENST00000492449 RNASE2P10153 161 aaKnown RBP7.73□□□□□ -1.17
VPS8-225ENST00000492449 LYRM7Q5U5X0 104 aa7.73□□□□□ -1.17
VPS8-225ENST00000492449 FAM104BQ5XKR9 115 aa7.73□□□□□ -1.17
VPS8-225ENST00000492449 OR13A1Q8NGR1 328 aa7.73□□□□□ -1.17
VPS8-225ENST00000492449 IGHV3-43A0A0B4J1X8 118 aa7.73□□□□□ -1.17
VPS8-225ENST00000492449 HOXA3O43365 443 aaPredicted RBP7.73□□□□□ -1.17
VPS8-225ENST00000492449 DPM2O94777 84 aa7.73□□□□□ -1.17
VPS8-225ENST00000492449 IGHV3-43DP0DP04 118 aa7.73□□□□□ -1.17
VPS8-225ENST00000492449 AJUBAQ96IF1 538 aa7.73□□□□□ -1.17
VPS8-225ENST00000492449 DEFB126Q9BYW3 111 aa7.73□□□□□ -1.17
VPS8-225ENST00000492449 FBXL15Q9H469 300 aa7.73□□□□□ -1.17
VPS8-225ENST00000492449 ZNF503-AS2A6NEH8 195 aa7.72□□□□□ -1.17
VPS8-225ENST00000492449 ATP5LO75964 103 aa7.72□□□□□ -1.17
VPS8-225ENST00000492449 IL4P05112 153 aa7.72□□□□□ -1.17
VPS8-225ENST00000492449 SPINK2P20155 84 aa7.72□□□□□ -1.17
VPS8-225ENST00000492449 TWIST1Q15672 202 aa7.72□□□□□ -1.17
VPS8-225ENST00000492449 PTH2Q96A98 100 aa7.72□□□□□ -1.17
VPS8-225ENST00000492449 GON4LQ3T8J9 2241 aa7.72□□□□□ -1.17
VPS8-225ENST00000492449 LOC389332A0A1B0GUA5 103 aa7.72□□□□□ -1.17
VPS8-225ENST00000492449 DEFB108AA8MXU0 73 aa7.72□□□□□ -1.17
VPS8-225ENST00000492449 INS-IGF2F8WCM5 200 aa7.72□□□□□ -1.17
VPS8-225ENST00000492449 K7EMI3 77 aa7.72□□□□□ -1.17
VPS8-225ENST00000492449 LY6DQ14210 128 aa7.72□□□□□ -1.17
VPS8-225ENST00000492449 FAM169BQ8N8A8 192 aa7.72□□□□□ -1.17
VPS8-225ENST00000492449 MAPKAPK5-AS1Q8N8E1 139 aa7.72□□□□□ -1.17
VPS8-225ENST00000492449 THAP8Q8NA92 274 aa7.72□□□□□ -1.17
VPS8-225ENST00000492449 HIST1H4GQ99525 98 aa7.72□□□□□ -1.17
VPS8-225ENST00000492449 KIR2DL4Q99706 377 aa7.72□□□□□ -1.17
VPS8-225ENST00000492449 RAB9BQ9NP90 201 aa7.72□□□□□ -1.17
VPS8-225ENST00000492449 COL6A3P12111 3177 aa7.72□□□□□ -1.17
VPS8-225ENST00000492449 IGKV3D-15A0A087WSY6 115 aa7.71□□□□□ -1.17
VPS8-225ENST00000492449 IGLV2-11P01706 119 aa7.71□□□□□ -1.17
VPS8-225ENST00000492449 SPRNQ5BIV9 151 aa7.71□□□□□ -1.17
VPS8-225ENST00000492449 TTC32Q5I0X7 151 aa7.71□□□□□ -1.17
VPS8-225ENST00000492449 SGK494Q96LW2 274 aa7.71□□□□□ -1.17
VPS8-225ENST00000492449 AGRNO00468 2067 aa7.71□□□□□ -1.17
VPS8-225ENST00000492449 CHD9Q3L8U1 2897 aa7.71□□□□□ -1.17
VPS8-225ENST00000492449 CFHR1Q03591 330 aa7.71□□□□□ -1.18
VPS8-225ENST00000492449 RPL39P5Q59GN2 51 aa7.71□□□□□ -1.18
VPS8-225ENST00000492449 PLXDC1Q8IUK5 500 aa7.71□□□□□ -1.18
VPS8-225ENST00000492449 PPDPFQ9H3Y8 114 aa7.71□□□□□ -1.18
VPS8-225ENST00000492449 CABIN1Q9Y6J0 2220 aa7.71□□□□□ -1.18
VPS8-225ENST00000492449 TRBV20-1A0A075B6N2 111 aa7.71□□□□□ -1.18
VPS8-225ENST00000492449 CXCL13O43927 109 aa7.71□□□□□ -1.18
VPS8-225ENST00000492449 SNCGO76070 127 aa7.71□□□□□ -1.18
VPS8-225ENST00000492449 CCL3P10147 92 aa7.71□□□□□ -1.18
VPS8-225ENST00000492449 MYOD1P15172 320 aa7.71□□□□□ -1.18
VPS8-225ENST00000492449 FCER1GP30273 86 aa7.71□□□□□ -1.18
VPS8-225ENST00000492449 ZC2HC1BQ5TFG8 222 aa7.71□□□□□ -1.18
VPS8-225ENST00000492449 GTSCR1Q86UQ5 136 aa7.71□□□□□ -1.18
VPS8-225ENST00000492449 RASL10AQ92737 203 aa7.71□□□□□ -1.18
VPS8-225ENST00000492449 CSDC2Q9Y534 153 aaKnown RBP7.71□□□□□ -1.18
VPS8-225ENST00000492449 MYMXA0A1B0GTQ4 84 aa7.7□□□□□ -1.18
VPS8-225ENST00000492449 A8MWV9 139 aa7.7□□□□□ -1.18
VPS8-225ENST00000492449 UPK2O00526 184 aa7.7□□□□□ -1.18
VPS8-225ENST00000492449 UBE2D1P51668 147 aa7.7□□□□□ -1.18
VPS8-225ENST00000492449 TMEM78Q5T7P6 136 aa7.7□□□□□ -1.18
VPS8-225ENST00000492449 LINC00305Q7Z4B0 112 aa7.7□□□□□ -1.18
VPS8-225ENST00000492449 PPP1R27Q86WC6 154 aa7.7□□□□□ -1.18
VPS8-225ENST00000492449 CIARTQ8N365 385 aaPredicted RBP7.7□□□□□ -1.18
VPS8-225ENST00000492449 SRSF12Q8WXF0 261 aaKnown RBP7.7□□□□□ -1.18
VPS8-225ENST00000492449 RASL11BQ9BPW5 248 aa7.7□□□□□ -1.18
VPS8-225ENST00000492449 IGKV1D-37A0A075B6S9 117 aa7.7□□□□□ -1.18
VPS8-225ENST00000492449 IGHV1OR21-1A0A087WYE8 117 aa7.7□□□□□ -1.18
VPS8-225ENST00000492449 ZNHIT1O43257 154 aa7.7□□□□□ -1.18
VPS8-225ENST00000492449 CELA2AP08217 269 aa7.7□□□□□ -1.18
VPS8-225ENST00000492449 GP9P14770 177 aa7.7□□□□□ -1.18
VPS8-225ENST00000492449 CXCL12P48061 93 aa7.7□□□□□ -1.18
VPS8-225ENST00000492449 CCL11P51671 97 aa7.7□□□□□ -1.18
VPS8-225ENST00000492449 ATP5J2P56134 94 aa7.7□□□□□ -1.18
VPS8-225ENST00000492449 MLANAQ16655 118 aa7.7□□□□□ -1.18
VPS8-225ENST00000492449 MRPL51Q4U2R6 128 aaKnown RBP7.7□□□□□ -1.18
VPS8-225ENST00000492449 FAM159AQ6UWV7 190 aa7.7□□□□□ -1.18
VPS8-225ENST00000492449 CITED2Q99967 270 aaPredicted RBP7.7□□□□□ -1.18
VPS8-225ENST00000492449 PSMB2P49721 201 aa7.69□□□□□ -1.18
VPS8-225ENST00000492449 LINC01600Q96MT4 127 aa7.69□□□□□ -1.18
VPS8-225ENST00000492449 SRSF8Q9BRL6 282 aaKnown RBP7.69□□□□□ -1.18
VPS8-225ENST00000492449 Q9H3A6 140 aa7.69□□□□□ -1.18
VPS8-225ENST00000492449 IGFLR1Q9H665 355 aa7.69□□□□□ -1.18
VPS8-225ENST00000492449 OTORQ9NRC9 128 aa7.69□□□□□ -1.18
VPS8-225ENST00000492449 A0A096LPE4 126 aa7.69□□□□□ -1.18
VPS8-225ENST00000492449 TRAV4A0A0B4J268 109 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms