RNA–Protein interactions for RNA: ENST00000491433.1

CLCNKA-206, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 3

Gene CLCNKA, Length 824 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-206ENST00000491433 OR2F1Q13607 317 aa7.96□□□□□ -1.14
CLCNKA-206ENST00000491433 ACOT7LQ6ZUV0 252 aa7.96□□□□□ -1.14
CLCNKA-206ENST00000491433 ZNF546Q86UE3 836 aa7.96□□□□□ -1.14
CLCNKA-206ENST00000491433 KCNRGQ8N5I3 272 aa7.96□□□□□ -1.14
CLCNKA-206ENST00000491433 FAM24BQ8N5W8 94 aa7.96□□□□□ -1.14
CLCNKA-206ENST00000491433 ZNF114Q8NC26 417 aa7.96□□□□□ -1.14
CLCNKA-206ENST00000491433 KRTAP9-2Q9BYQ4 174 aa7.96□□□□□ -1.14
CLCNKA-206ENST00000491433 RBKSQ9H477 322 aa7.96□□□□□ -1.14
CLCNKA-206ENST00000491433 PUS1Q9Y606 427 aaKnown RBP eCLIP7.96□□□□□ -1.14
CLCNKA-206ENST00000491433 NACAE9PAV3 2078 aa7.95□□□□□ -1.14
CLCNKA-206ENST00000491433 KNCNA6PVL3 124 aa7.95□□□□□ -1.14
CLCNKA-206ENST00000491433 PMS2P5A8MQ11 134 aa7.95□□□□□ -1.14
CLCNKA-206ENST00000491433 TSC22D2O75157 780 aa7.95□□□□□ -1.14
CLCNKA-206ENST00000491433 MED6O75586 246 aa7.95□□□□□ -1.14
CLCNKA-206ENST00000491433 APOHP02749 345 aaPredicted RBP7.95□□□□□ -1.14
CLCNKA-206ENST00000491433 ZNF688P0C7X2 276 aa7.95□□□□□ -1.14
CLCNKA-206ENST00000491433 NKX2-5P52952 324 aaPredicted RBP7.95□□□□□ -1.14
CLCNKA-206ENST00000491433 ERHP84090 104 aaKnown RBP7.95□□□□□ -1.14
CLCNKA-206ENST00000491433 PRCDQ00LT1 54 aa7.95□□□□□ -1.14
CLCNKA-206ENST00000491433 TNP2Q05952 138 aa7.95□□□□□ -1.14
CLCNKA-206ENST00000491433 BSXQ3C1V8 233 aa7.95□□□□□ -1.14
CLCNKA-206ENST00000491433 LRRC37A5PQ49AS3 106 aa7.95□□□□□ -1.14
CLCNKA-206ENST00000491433 LILRB2Q8N423 598 aa7.95□□□□□ -1.14
CLCNKA-206ENST00000491433 C15orf53Q8NAA6 179 aa7.95□□□□□ -1.14
CLCNKA-206ENST00000491433 OR4A16Q8NH70 328 aa7.95□□□□□ -1.14
CLCNKA-206ENST00000491433 RNASE11Q8TAA1 199 aaKnown RBP7.95□□□□□ -1.14
CLCNKA-206ENST00000491433 METTL26Q96S19 204 aa7.95□□□□□ -1.14
CLCNKA-206ENST00000491433 LYRM2Q9NU23 88 aaPredicted RBP7.95□□□□□ -1.14
CLCNKA-206ENST00000491433 LSM5Q9Y4Y9 91 aaKnown RBP7.95□□□□□ -1.14
CLCNKA-206ENST00000491433 IGHV3-66A0A0C4DH42 116 aa7.94□□□□□ -1.14
CLCNKA-206ENST00000491433 A0A0D9SG52 128 aa7.94□□□□□ -1.14
CLCNKA-206ENST00000491433 HELTA6NFD8 242 aa7.94□□□□□ -1.14
CLCNKA-206ENST00000491433 HOXA1P49639 335 aaPredicted RBP7.94□□□□□ -1.14
CLCNKA-206ENST00000491433 ATP5IP56385 69 aaPredicted RBP7.94□□□□□ -1.14
CLCNKA-206ENST00000491433 SNRPD3P62318 126 aaKnown RBP7.94□□□□□ -1.14
CLCNKA-206ENST00000491433 TMEM14EPQ6UXP3 125 aa7.94□□□□□ -1.14
CLCNKA-206ENST00000491433 C6orf223Q8N319 242 aa7.94□□□□□ -1.14
CLCNKA-206ENST00000491433 DCANP1Q8TF63 244 aa7.94□□□□□ -1.14
CLCNKA-206ENST00000491433 PINX1Q96BK5 328 aaKnown RBP7.94□□□□□ -1.14
CLCNKA-206ENST00000491433 NIPSNAP3BQ9BS92 247 aa7.94□□□□□ -1.14
CLCNKA-206ENST00000491433 ATG101Q9BSB4 218 aa7.94□□□□□ -1.14
CLCNKA-206ENST00000491433 SCRT1Q9BWW7 348 aa7.94□□□□□ -1.14
CLCNKA-206ENST00000491433 MAGT1Q9H0U3 335 aa7.94□□□□□ -1.14
CLCNKA-206ENST00000491433 ZFAND3Q9H8U3 227 aa7.94□□□□□ -1.14
CLCNKA-206ENST00000491433 SEPSECSQ9HD40 501 aaKnown RBP7.94□□□□□ -1.14
CLCNKA-206ENST00000491433 RFNGQ9Y644 331 aa7.94□□□□□ -1.14
CLCNKA-206ENST00000491433 LRP1BQ9NZR2 4599 aa7.93□□□□□ -1.14
CLCNKA-206ENST00000491433 FXYD6-FXYD2A0A087WZ82 144 aa7.93□□□□□ -1.14
CLCNKA-206ENST00000491433 CORTO00230 105 aa7.93□□□□□ -1.14
CLCNKA-206ENST00000491433 ARPC5O15511 151 aa7.93□□□□□ -1.14
CLCNKA-206ENST00000491433 SCGB1D2O95969 90 aa7.93□□□□□ -1.14
CLCNKA-206ENST00000491433 PVALBP20472 110 aaPredicted RBP7.93□□□□□ -1.14
CLCNKA-206ENST00000491433 CRYBB3P26998 211 aa7.93□□□□□ -1.14
CLCNKA-206ENST00000491433 RPL12P30050 165 aaKnown RBP7.93□□□□□ -1.14
CLCNKA-206ENST00000491433 TMEM252Q8N6L7 170 aa7.93□□□□□ -1.14
CLCNKA-206ENST00000491433 TMEM170AQ8WVE7 144 aa7.93□□□□□ -1.14
CLCNKA-206ENST00000491433 CIB3Q96Q77 187 aaPredicted RBP7.93□□□□□ -1.14
CLCNKA-206ENST00000491433 CYTL1Q9NRR1 136 aa7.93□□□□□ -1.14
CLCNKA-206ENST00000491433 XCL2Q9UBD3 114 aa7.93□□□□□ -1.14
CLCNKA-206ENST00000491433 PLA2G2DQ9UNK4 145 aa7.93□□□□□ -1.14
CLCNKA-206ENST00000491433 IGSF23A1L1A6 192 aa7.92□□□□□ -1.14
CLCNKA-206ENST00000491433 FAM24AA6NFZ4 105 aa7.92□□□□□ -1.14
CLCNKA-206ENST00000491433 PRSS46E5RG02 174 aa7.92□□□□□ -1.14
CLCNKA-206ENST00000491433 WRBO00258 174 aa7.92□□□□□ -1.14
CLCNKA-206ENST00000491433 SSSCA1O60232 199 aa7.92□□□□□ -1.14
CLCNKA-206ENST00000491433 S100A11P31949 105 aa7.92□□□□□ -1.14
CLCNKA-206ENST00000491433 S100A10P60903 97 aa7.92□□□□□ -1.14
CLCNKA-206ENST00000491433 PSMG4Q5JS54 123 aa7.92□□□□□ -1.14
CLCNKA-206ENST00000491433 ZNF705AQ6ZN79 300 aaPredicted RBP7.92□□□□□ -1.14
CLCNKA-206ENST00000491433 TMUB2Q71RG4 321 aa7.92□□□□□ -1.14
CLCNKA-206ENST00000491433 DTD1Q8TEA8 209 aa7.92□□□□□ -1.14
CLCNKA-206ENST00000491433 ZNF503Q96F45 646 aa7.92□□□□□ -1.14
CLCNKA-206ENST00000491433 DKK2Q9UBU2 259 aa7.92□□□□□ -1.14
CLCNKA-206ENST00000491433 BOLA1Q9Y3E2 137 aa7.92□□□□□ -1.14
CLCNKA-206ENST00000491433 HSPB11Q9Y547 144 aa7.92□□□□□ -1.14
CLCNKA-206ENST00000491433 RNF213Q63HN8 5207 aa7.91□□□□□ -1.14
CLCNKA-206ENST00000491433 NBDYA0A0U1RRE5 68 aa7.91□□□□□ -1.14
CLCNKA-206ENST00000491433 ZNF705FA8MVS1 300 aaPredicted RBP7.91□□□□□ -1.14
CLCNKA-206ENST00000491433 L7N2F9 121 aa7.91□□□□□ -1.14
CLCNKA-206ENST00000491433 NXPH3O95157 252 aa7.91□□□□□ -1.14
CLCNKA-206ENST00000491433 IGHV3-48P01763 117 aa7.91□□□□□ -1.14
CLCNKA-206ENST00000491433 ZNF705DP0CH99 300 aaPredicted RBP7.91□□□□□ -1.14
CLCNKA-206ENST00000491433 ZNF705BP0CI00 300 aaPredicted RBP7.91□□□□□ -1.14
CLCNKA-206ENST00000491433 SNCAP37840 140 aa7.91□□□□□ -1.14
CLCNKA-206ENST00000491433 SUB1P53999 127 aaKnown RBP eCLIP7.91□□□□□ -1.14
CLCNKA-206ENST00000491433 EMP1P54849 157 aa7.91□□□□□ -1.14
CLCNKA-206ENST00000491433 IFITM2Q01629 132 aa7.91□□□□□ -1.14
CLCNKA-206ENST00000491433 NHLH2Q02577 135 aa7.91□□□□□ -1.14
CLCNKA-206ENST00000491433 BAXQ07812 192 aa7.91□□□□□ -1.14
CLCNKA-206ENST00000491433 OPCMLQ14982 345 aa7.91□□□□□ -1.14
CLCNKA-206ENST00000491433 INO80EQ8NBZ0 244 aaPredicted RBP7.91□□□□□ -1.14
CLCNKA-206ENST00000491433 SLC25A31Q9H0C2 315 aa7.91□□□□□ -1.14
CLCNKA-206ENST00000491433 ARV1Q9H2C2 271 aa7.91□□□□□ -1.14
CLCNKA-206ENST00000491433 PSENENQ9NZ42 101 aa7.91□□□□□ -1.14
CLCNKA-206ENST00000491433 U3KQ87 197 aa7.91□□□□□ -1.14
CLCNKA-206ENST00000491433 TRAV30A0A087WSZ9 112 aa7.9□□□□□ -1.14
CLCNKA-206ENST00000491433 H3BMM0 161 aa7.9□□□□□ -1.14
CLCNKA-206ENST00000491433 TAAR5O14804 337 aa7.9□□□□□ -1.14
CLCNKA-206ENST00000491433 RNASE2P10153 161 aaKnown RBP7.9□□□□□ -1.14
CLCNKA-206ENST00000491433 HTN3P15516 51 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms