RNA–Protein interactions for RNA: ENST00000490690.1

SHROOM3-209, Transcript of shroom family member 3, humanhuman

TSL 4

Gene SHROOM3, Length 504 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-209ENST00000490690 TAS2R45P59539 299 aa14.94□□□□□ -0.02
SHROOM3-209ENST00000490690 RHOBP62745 196 aa14.94□□□□□ -0.02
SHROOM3-209ENST00000490690 EIF5AL1Q6IS14 154 aaKnown RBP14.94□□□□□ -0.02
SHROOM3-209ENST00000490690 TMEM37Q8WXS4 190 aa14.94□□□□□ -0.02
SHROOM3-209ENST00000490690 ZNF471Q9BX82 626 aaPredicted RBP14.94□□□□□ -0.02
SHROOM3-209ENST00000490690 NRN1Q9NPD7 142 aa14.94□□□□□ -0.02
SHROOM3-209ENST00000490690 PKD1L1Q8TDX9 2849 aa14.94□□□□□ -0.02
SHROOM3-209ENST00000490690 TPT1P13693 172 aaKnown RBP14.93□□□□□ -0.02
SHROOM3-209ENST00000490690 CXCL2P19875 107 aa14.93□□□□□ -0.02
SHROOM3-209ENST00000490690 FAM78BQ5VT40 261 aa14.93□□□□□ -0.02
SHROOM3-209ENST00000490690 PATE2Q6UY27 113 aa14.93□□□□□ -0.02
SHROOM3-209ENST00000490690 A0A1W2PPV4 95 aa14.92□□□□□ -0.02
SHROOM3-209ENST00000490690 ZNF785A8K8V0 405 aa14.92□□□□□ -0.02
SHROOM3-209ENST00000490690 ATF4P18848 351 aaPredicted RBP14.92□□□□□ -0.02
SHROOM3-209ENST00000490690 ID1P41134 155 aa14.92□□□□□ -0.02
SHROOM3-209ENST00000490690 UHRF2Q96PU4 802 aa14.92□□□□□ -0.02
SHROOM3-209ENST00000490690 SCRT1Q9BWW7 348 aa14.92□□□□□ -0.02
SHROOM3-209ENST00000490690 MS4A6AQ9H2W1 248 aa14.92□□□□□ -0.02
SHROOM3-209ENST00000490690 FUT9Q9Y231 359 aa14.92□□□□□ -0.02
SHROOM3-209ENST00000490690 SNRPD3P62318 126 aaKnown RBP14.91□□□□□ -0.02
SHROOM3-209ENST00000490690 GUK1Q16774 197 aa14.91□□□□□ -0.02
SHROOM3-209ENST00000490690 SLC25A32Q9H2D1 315 aa14.91□□□□□ -0.02
SHROOM3-209ENST00000490690 CYTL1Q9NRR1 136 aa14.91□□□□□ -0.02
SHROOM3-209ENST00000490690 IZUMO1RA6ND01 250 aa14.9□□□□□ -0.02
SHROOM3-209ENST00000490690 SEC11BP0C7V7 166 aa14.9□□□□□ -0.02
SHROOM3-209ENST00000490690 KRTAP10-11P60412 298 aa14.9□□□□□ -0.02
SHROOM3-209ENST00000490690 LGALSLQ3ZCW2 172 aaPredicted RBP14.9□□□□□ -0.02
SHROOM3-209ENST00000490690 AKR1C8PQ5T2L2 129 aa14.9□□□□□ -0.02
SHROOM3-209ENST00000490690 SLC51BQ86UW2 128 aa14.9□□□□□ -0.02
SHROOM3-209ENST00000490690 BAP18Q8IXM2 172 aa14.9□□□□□ -0.02
SHROOM3-209ENST00000490690 STOML3Q8TAV4 291 aa14.9□□□□□ -0.02
SHROOM3-209ENST00000490690 CLEC5AQ9NY25 188 aa14.9□□□□□ -0.02
SHROOM3-209ENST00000490690 TMEM14CQ9P0S9 112 aa14.9□□□□□ -0.02
SHROOM3-209ENST00000490690 SORL1Q92673 2214 aa14.89□□□□□ -0.03
SHROOM3-209ENST00000490690 UMAD1C9J7I0 102 aa14.89□□□□□ -0.03
SHROOM3-209ENST00000490690 CD81P60033 236 aa14.89□□□□□ -0.03
SHROOM3-209ENST00000490690 KHDC3LQ587J8 217 aa14.89□□□□□ -0.03
SHROOM3-209ENST00000490690 OR10G4Q8NGN3 311 aa14.89□□□□□ -0.03
SHROOM3-209ENST00000490690 OR10G9Q8NGN4 311 aa14.89□□□□□ -0.03
SHROOM3-209ENST00000490690 OR10G7Q8NGN6 311 aa14.89□□□□□ -0.03
SHROOM3-209ENST00000490690 CMYA5Q8N3K9 4069 aa14.88□□□□□ -0.03
SHROOM3-209ENST00000490690 IGKV3-7A0A075B6H7 116 aa14.88□□□□□ -0.03
SHROOM3-209ENST00000490690 A0A087X0K7 114 aa14.88□□□□□ -0.03
SHROOM3-209ENST00000490690 SPP1P10451 314 aa14.88□□□□□ -0.03
SHROOM3-209ENST00000490690 TMEM41BQ5BJD5 291 aa14.88□□□□□ -0.03
SHROOM3-209ENST00000490690 LCN15Q6UWW0 184 aa14.88□□□□□ -0.03
SHROOM3-209ENST00000490690 AURKAIP1Q9NWT8 199 aaPredicted RBP14.88□□□□□ -0.03
SHROOM3-209ENST00000490690 OR11H12B2RN74 326 aa14.87□□□□□ -0.03
SHROOM3-209ENST00000490690 K7EQG2 157 aa14.87□□□□□ -0.03
SHROOM3-209ENST00000490690 ISLRO14498 428 aa14.87□□□□□ -0.03
SHROOM3-209ENST00000490690 PSMB3P49720 205 aa14.87□□□□□ -0.03
SHROOM3-209ENST00000490690 LEMD1Q68G75 181 aa14.87□□□□□ -0.03
SHROOM3-209ENST00000490690 PQLC2Q6ZP29 291 aa14.87□□□□□ -0.03
SHROOM3-209ENST00000490690 C9orf62Q8N4C0 152 aa14.87□□□□□ -0.03
SHROOM3-209ENST00000490690 GBGT1Q8N5D6 347 aa14.87□□□□□ -0.03
SHROOM3-209ENST00000490690 LRRC20Q8TCA0 184 aa14.87□□□□□ -0.03
SHROOM3-209ENST00000490690 DCANP1Q8TF63 244 aa14.87□□□□□ -0.03
SHROOM3-209ENST00000490690 PRR25Q96S07 402 aa14.87□□□□□ -0.03
SHROOM3-209ENST00000490690 SLC50A1Q9BRV3 221 aa14.87□□□□□ -0.03
SHROOM3-209ENST00000490690 ACTR3CQ9C0K3 210 aaPredicted RBP14.87□□□□□ -0.03
SHROOM3-209ENST00000490690 HRH4Q9H3N8 390 aa14.87□□□□□ -0.03
SHROOM3-209ENST00000490690 SMAD5-AS1Q9Y6J3 95 aa14.87□□□□□ -0.03
SHROOM3-209ENST00000490690 TFPI2P48307 235 aa14.86□□□□□ -0.03
SHROOM3-209ENST00000490690 CDC34P49427 236 aaPredicted RBP14.86□□□□□ -0.03
SHROOM3-209ENST00000490690 PDE6HQ13956 83 aa14.86□□□□□ -0.03
SHROOM3-209ENST00000490690 GCSAMLQ5JQS6 135 aa14.86□□□□□ -0.03
SHROOM3-209ENST00000490690 NOTCH1P46531 2555 aa14.85□□□□□ -0.03
SHROOM3-209ENST00000490690 ZNF253O75346 499 aa14.85□□□□□ -0.03
SHROOM3-209ENST00000490690 HIST1H1EP10412 219 aaKnown RBP14.85□□□□□ -0.03
SHROOM3-209ENST00000490690 CD300CQ08708 224 aa14.85□□□□□ -0.03
SHROOM3-209ENST00000490690 DPPA3Q6W0C5 159 aa14.85□□□□□ -0.03
SHROOM3-209ENST00000490690 WFDC3Q8IUB2 231 aa14.85□□□□□ -0.03
SHROOM3-209ENST00000490690 C16orf92Q96LL3 132 aa14.85□□□□□ -0.03
SHROOM3-209ENST00000490690 SH3BGRL3Q9H299 93 aa14.85□□□□□ -0.03
SHROOM3-209ENST00000490690 NBEAL1Q6ZS30 2694 aa14.85□□□□□ -0.03
SHROOM3-209ENST00000490690 OR7C2O60412 319 aa14.84□□□□□ -0.03
SHROOM3-209ENST00000490690 RAB5CP51148 216 aa14.84□□□□□ -0.03
SHROOM3-209ENST00000490690 RAB2AP61019 212 aa14.84□□□□□ -0.03
SHROOM3-209ENST00000490690 OR51M1Q9H341 326 aa14.84□□□□□ -0.03
SHROOM3-209ENST00000490690 SELENOKQ9Y6D0 94 aa14.84□□□□□ -0.03
SHROOM3-209ENST00000490690 A8MZ25 164 aa14.83□□□□□ -0.04
SHROOM3-209ENST00000490690 MRPS12O15235 138 aaKnown RBP14.83□□□□□ -0.04
SHROOM3-209ENST00000490690 FAM122CQ6P4D5 195 aa14.83□□□□□ -0.04
SHROOM3-209ENST00000490690 MIR17HGQ75NE6 70 aa14.83□□□□□ -0.04
SHROOM3-209ENST00000490690 PAXXQ9BUH6 204 aa14.83□□□□□ -0.04
SHROOM3-209ENST00000490690 TUBA4BQ9H853 241 aa14.83□□□□□ -0.04
SHROOM3-209ENST00000490690 CTXND1A0A1B0GTU2 59 aa14.82□□□□□ -0.04
SHROOM3-209ENST00000490690 CD7P09564 240 aa14.82□□□□□ -0.04
SHROOM3-209ENST00000490690 IGLC2P0DOY2 106 aa14.82□□□□□ -0.04
SHROOM3-209ENST00000490690 PSG9Q00887 426 aa14.82□□□□□ -0.04
SHROOM3-209ENST00000490690 DEFA6Q01524 100 aa14.82□□□□□ -0.04
SHROOM3-209ENST00000490690 SPATA31B1PQ5VZV4 182 aa14.82□□□□□ -0.04
SHROOM3-209ENST00000490690 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa14.82□□□□□ -0.04
SHROOM3-209ENST00000490690 PHYHIPLQ96FC7 376 aa14.82□□□□□ -0.04
SHROOM3-209ENST00000490690 SLC25A2Q9BXI2 301 aa14.82□□□□□ -0.04
SHROOM3-209ENST00000490690 MAP6D1Q9H9H5 199 aa14.82□□□□□ -0.04
SHROOM3-209ENST00000490690 RPRMQ9NS64 109 aa14.82□□□□□ -0.04
SHROOM3-209ENST00000490690 ODF3L2Q3SX64 289 aa14.81□□□□□ -0.04
SHROOM3-209ENST00000490690 MORN5Q5VZ52 161 aa14.81□□□□□ -0.04
SHROOM3-209ENST00000490690 Q8N1Y9 231 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms