RNA–Protein interactions for RNA: ENST00000489853.1

SNRNP40-206, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 1,928 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-206ENST00000489853 PRRG2O14669 202 aa3.82□□□□□ -1.8
SNRNP40-206ENST00000489853 HOXA3O43365 443 aaPredicted RBP3.82□□□□□ -1.8
SNRNP40-206ENST00000489853 HBDP02042 147 aa3.82□□□□□ -1.8
SNRNP40-206ENST00000489853 SP1P08047 785 aa3.82□□□□□ -1.8
SNRNP40-206ENST00000489853 COL8A2P25067 703 aa3.82□□□□□ -1.8
SNRNP40-206ENST00000489853 CD27P26842 260 aa3.82□□□□□ -1.8
SNRNP40-206ENST00000489853 RIGQ13278 110 aa3.82□□□□□ -1.8
SNRNP40-206ENST00000489853 DIAPH2-AS1Q14236 149 aa3.82□□□□□ -1.8
SNRNP40-206ENST00000489853 ANXA2RQ3ZCQ2 193 aa3.82□□□□□ -1.8
SNRNP40-206ENST00000489853 KLF17Q5JT82 389 aaPredicted RBP3.82□□□□□ -1.8
SNRNP40-206ENST00000489853 ASPHD1Q5U4P2 390 aa3.82□□□□□ -1.8
SNRNP40-206ENST00000489853 MOB3BQ86TA1 216 aa3.82□□□□□ -1.8
SNRNP40-206ENST00000489853 FGFBP3Q8TAT2 258 aa3.82□□□□□ -1.8
SNRNP40-206ENST00000489853 GLMPQ8WWB7 406 aa3.82□□□□□ -1.8
SNRNP40-206ENST00000489853 SLC25A2Q9BXI2 301 aa3.82□□□□□ -1.8
SNRNP40-206ENST00000489853 PPDPFQ9H3Y8 114 aa3.82□□□□□ -1.8
SNRNP40-206ENST00000489853 RAB9BQ9NP90 201 aa3.82□□□□□ -1.8
SNRNP40-206ENST00000489853 EPDR1Q9UM22 224 aa3.82□□□□□ -1.8
SNRNP40-206ENST00000489853 HHLA3Q9XRX5 114 aa3.82□□□□□ -1.8
SNRNP40-206ENST00000489853 COL5A1P20908 1838 aaPredicted RBP3.82□□□□□ -1.8
SNRNP40-206ENST00000489853 TRAV25A0A0B4J276 109 aa3.82□□□□□ -1.8
SNRNP40-206ENST00000489853 A0A1B0GUT8 65 aa3.82□□□□□ -1.8
SNRNP40-206ENST00000489853 EPOPA6NHQ4 379 aa3.82□□□□□ -1.8
SNRNP40-206ENST00000489853 LINC00473A8K010 186 aa3.82□□□□□ -1.8
SNRNP40-206ENST00000489853 SNCGO76070 127 aa3.82□□□□□ -1.8
SNRNP40-206ENST00000489853 RBP4P02753 201 aa3.82□□□□□ -1.8
SNRNP40-206ENST00000489853 PATE4P0C8F1 98 aa3.82□□□□□ -1.8
SNRNP40-206ENST00000489853 GYPEP15421 78 aa3.82□□□□□ -1.8
SNRNP40-206ENST00000489853 TNFRSF1AP19438 455 aa3.82□□□□□ -1.8
SNRNP40-206ENST00000489853 SPINK2P20155 84 aa3.82□□□□□ -1.8
SNRNP40-206ENST00000489853 MYCNOSP40205 109 aa3.82□□□□□ -1.8
SNRNP40-206ENST00000489853 IFI27P40305 119 aaPredicted RBP3.82□□□□□ -1.8
SNRNP40-206ENST00000489853 ERVK-16P61578 105 aa3.82□□□□□ -1.8
SNRNP40-206ENST00000489853 UBE2L3P68036 154 aaKnown RBP3.82□□□□□ -1.8
SNRNP40-206ENST00000489853 PLGLB1Q02325 96 aa3.82□□□□□ -1.8
SNRNP40-206ENST00000489853 POU2AF1Q16633 256 aa3.82□□□□□ -1.8
SNRNP40-206ENST00000489853 PRR31Q5SQ13 230 aa3.82□□□□□ -1.8
SNRNP40-206ENST00000489853 C16orf47Q6ZP98 133 aaPredicted RBP3.82□□□□□ -1.8
SNRNP40-206ENST00000489853 SBSPONQ8IVN8 264 aa3.82□□□□□ -1.8
SNRNP40-206ENST00000489853 UBALD1Q8TB05 177 aa3.82□□□□□ -1.8
SNRNP40-206ENST00000489853 DNAJC30Q96LL9 226 aa3.82□□□□□ -1.8
SNRNP40-206ENST00000489853 ZNF488Q96MN9 340 aa3.82□□□□□ -1.8
SNRNP40-206ENST00000489853 PAXXQ9BUH6 204 aa3.82□□□□□ -1.8
SNRNP40-206ENST00000489853 ENY2Q9NPA8 101 aa3.82□□□□□ -1.8
SNRNP40-206ENST00000489853 FSCN3Q9NQT6 498 aa3.82□□□□□ -1.8
SNRNP40-206ENST00000489853 CSDC2Q9Y534 153 aaKnown RBP3.82□□□□□ -1.8
SNRNP40-206ENST00000489853 U3KQK5 164 aa3.82□□□□□ -1.8
SNRNP40-206ENST00000489853 CACNA1DQ01668 2161 aa3.81□□□□□ -1.8
SNRNP40-206ENST00000489853 NOTCH4Q99466 2003 aa3.81□□□□□ -1.8
SNRNP40-206ENST00000489853 IGKV2D-26A0A0A0MRZ7 120 aa3.81□□□□□ -1.8
SNRNP40-206ENST00000489853 OOEPA6NGQ2 149 aa3.81□□□□□ -1.8
SNRNP40-206ENST00000489853 OR2H2O95918 312 aa3.81□□□□□ -1.8
SNRNP40-206ENST00000489853 MOSP00540 346 aa3.81□□□□□ -1.8
SNRNP40-206ENST00000489853 NGFP01138 241 aa3.81□□□□□ -1.8
SNRNP40-206ENST00000489853 ACP1P24666 158 aa3.81□□□□□ -1.8
SNRNP40-206ENST00000489853 HSPE1P61604 102 aaKnown RBP3.81□□□□□ -1.8
SNRNP40-206ENST00000489853 PAX8Q06710 450 aa3.81□□□□□ -1.8
SNRNP40-206ENST00000489853 LY6DQ14210 128 aa3.81□□□□□ -1.8
SNRNP40-206ENST00000489853 ZNF542PQ5EBM4 170 aa3.81□□□□□ -1.8
SNRNP40-206ENST00000489853 MEIG1Q5JSS6 88 aa3.81□□□□□ -1.8
SNRNP40-206ENST00000489853 TMEM78Q5T7P6 136 aa3.81□□□□□ -1.8
SNRNP40-206ENST00000489853 LYRM7Q5U5X0 104 aa3.81□□□□□ -1.8
SNRNP40-206ENST00000489853 FAM159AQ6UWV7 190 aa3.81□□□□□ -1.8
SNRNP40-206ENST00000489853 LINC00322Q6ZN03 302 aaPredicted RBP3.81□□□□□ -1.8
SNRNP40-206ENST00000489853 YAF2Q8IY57 180 aa3.81□□□□□ -1.8
SNRNP40-206ENST00000489853 Q8IYB0 196 aa3.81□□□□□ -1.8
SNRNP40-206ENST00000489853 FADS6Q8N9I5 356 aa3.81□□□□□ -1.8
SNRNP40-206ENST00000489853 ITLN1Q8WWA0 313 aa3.81□□□□□ -1.8
SNRNP40-206ENST00000489853 FMC1Q96HJ9 113 aa3.81□□□□□ -1.8
SNRNP40-206ENST00000489853 SRSF8Q9BRL6 282 aaKnown RBP3.81□□□□□ -1.8
SNRNP40-206ENST00000489853 OCIAD1Q9NX40 245 aa3.81□□□□□ -1.8
SNRNP40-206ENST00000489853 DKK2Q9UBU2 259 aa3.81□□□□□ -1.8
SNRNP40-206ENST00000489853 HEATR1Q9H583 2144 aaKnown RBP3.8□□□□□ -1.8
SNRNP40-206ENST00000489853 BRWD1Q9NSI6 2320 aa3.8□□□□□ -1.8
SNRNP40-206ENST00000489853 TRBV20-1A0A075B6N2 111 aa3.8□□□□□ -1.8
SNRNP40-206ENST00000489853 A0A1W2PPI3 338 aa3.8□□□□□ -1.8
SNRNP40-206ENST00000489853 WI2-2373I1.2A0A1W2PRP0 233 aa3.8□□□□□ -1.8
SNRNP40-206ENST00000489853 TMEM30CPA0ZSE6 113 aa3.8□□□□□ -1.8
SNRNP40-206ENST00000489853 A8MWV9 139 aa3.8□□□□□ -1.8
SNRNP40-206ENST00000489853 C12orf77C9JDV5 145 aa3.8□□□□□ -1.8
SNRNP40-206ENST00000489853 J3QT63 122 aa3.8□□□□□ -1.8
SNRNP40-206ENST00000489853 OVOL3O00110 214 aa3.8□□□□□ -1.8
SNRNP40-206ENST00000489853 IGKCP01834 107 aa3.8□□□□□ -1.8
SNRNP40-206ENST00000489853 IL4P05112 153 aa3.8□□□□□ -1.8
SNRNP40-206ENST00000489853 FAM106CPP0CH98 169 aa3.8□□□□□ -1.8
SNRNP40-206ENST00000489853 KIR2DS2P43631 304 aa3.8□□□□□ -1.8
SNRNP40-206ENST00000489853 LOXL1Q08397 574 aaPredicted RBP3.8□□□□□ -1.8
SNRNP40-206ENST00000489853 FOXF2Q12947 444 aa3.8□□□□□ -1.8
SNRNP40-206ENST00000489853 FAM106AQ4KMX7 169 aa3.8□□□□□ -1.8
SNRNP40-206ENST00000489853 TMEM196Q5HYL7 178 aa3.8□□□□□ -1.8
SNRNP40-206ENST00000489853 MORN3Q6PF18 240 aaPredicted RBP3.8□□□□□ -1.8
SNRNP40-206ENST00000489853 ZNF493Q6ZR52 646 aa3.8□□□□□ -1.8
SNRNP40-206ENST00000489853 NFAM1Q8NET5 270 aaPredicted RBP3.8□□□□□ -1.8
SNRNP40-206ENST00000489853 OR1L4Q8NGR5 311 aa3.8□□□□□ -1.8
SNRNP40-206ENST00000489853 AJUBAQ96IF1 538 aa3.8□□□□□ -1.8
SNRNP40-206ENST00000489853 HIST1H4GQ99525 98 aa3.8□□□□□ -1.8
SNRNP40-206ENST00000489853 FBXL15Q9H469 300 aa3.8□□□□□ -1.8
SNRNP40-206ENST00000489853 MDFICQ9P1T7 246 aa3.8□□□□□ -1.8
SNRNP40-206ENST00000489853 KLF13Q9Y2Y9 288 aaPredicted RBP3.8□□□□□ -1.8
SNRNP40-206ENST00000489853 EXPH5Q8NEV8 1989 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms