RNA–Protein interactions for RNA: ENST00000488848.1

USP11-209, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 2

Gene USP11, Length 904 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-209ENST00000488848 BCL2P10415 239 aa8.16□□□□□ -1.1
USP11-209ENST00000488848 MYCNOSP40205 109 aa8.16□□□□□ -1.1
USP11-209ENST00000488848 KRTAP10-3P60369 221 aa8.16□□□□□ -1.1
USP11-209ENST00000488848 CCL20P78556 96 aa8.16□□□□□ -1.1
USP11-209ENST00000488848 GUK1Q16774 197 aa8.16□□□□□ -1.1
USP11-209ENST00000488848 RPEL1Q2QD12 228 aa8.16□□□□□ -1.1
USP11-209ENST00000488848 ZNF506Q5JVG8 444 aa8.16□□□□□ -1.1
USP11-209ENST00000488848 LCN15Q6UWW0 184 aa8.16□□□□□ -1.1
USP11-209ENST00000488848 KLHL30-AS1Q8NEE0 82 aa8.16□□□□□ -1.1
USP11-209ENST00000488848 GLMPQ8WWB7 406 aa8.16□□□□□ -1.1
USP11-209ENST00000488848 PBDC1Q9BVG4 233 aa8.16□□□□□ -1.1
USP11-209ENST00000488848 NKX6-2Q9C056 277 aaPredicted RBP8.16□□□□□ -1.1
USP11-209ENST00000488848 HRH4Q9H3N8 390 aa8.16□□□□□ -1.1
USP11-209ENST00000488848 DOK5Q9P104 306 aa8.16□□□□□ -1.1
USP11-209ENST00000488848 PKD1L1Q8TDX9 2849 aa8.16□□□□□ -1.1
USP11-209ENST00000488848 IGHV7-4-1A0A0J9YVY3 117 aa8.15□□□□□ -1.1
USP11-209ENST00000488848 LOC102723971A0A1B0GUV8 181 aa8.15□□□□□ -1.1
USP11-209ENST00000488848 A0A1W2PS18 150 aa8.15□□□□□ -1.1
USP11-209ENST00000488848 IFNA1P01562 189 aa8.15□□□□□ -1.1
USP11-209ENST00000488848 HIST1H1EP10412 219 aaKnown RBP8.15□□□□□ -1.1
USP11-209ENST00000488848 NPPCP23582 126 aa8.15□□□□□ -1.1
USP11-209ENST00000488848 BMI1P35226 326 aa8.15□□□□□ -1.1
USP11-209ENST00000488848 KRTAP24-1Q3LI83 254 aa8.15□□□□□ -1.1
USP11-209ENST00000488848 AWAT1Q58HT5 328 aa8.15□□□□□ -1.1
USP11-209ENST00000488848 C16orf54Q6UWD8 224 aa8.15□□□□□ -1.1
USP11-209ENST00000488848 PRIMA1Q86XR5 153 aa8.15□□□□□ -1.1
USP11-209ENST00000488848 CCDC28AQ8IWP9 274 aa8.15□□□□□ -1.1
USP11-209ENST00000488848 LYPD1Q8N2G4 141 aa8.15□□□□□ -1.1
USP11-209ENST00000488848 OR11H1Q8NG94 326 aa8.15□□□□□ -1.1
USP11-209ENST00000488848 OR1N2Q8NGR9 330 aa8.15□□□□□ -1.1
USP11-209ENST00000488848 PCNPQ8WW12 178 aaKnown RBP8.15□□□□□ -1.1
USP11-209ENST00000488848 RAX2Q96IS3 184 aa8.15□□□□□ -1.1
USP11-209ENST00000488848 PAXXQ9BUH6 204 aa8.15□□□□□ -1.1
USP11-209ENST00000488848 ELOVL1Q9BW60 279 aa8.15□□□□□ -1.1
USP11-209ENST00000488848 OR51M1Q9H341 326 aa8.15□□□□□ -1.1
USP11-209ENST00000488848 SMPXQ9UHP9 88 aa8.15□□□□□ -1.1
USP11-209ENST00000488848 RBFOX3A6NFN3 312 aa8.14□□□□□ -1.11
USP11-209ENST00000488848 TMEM250H0YL14 139 aa8.14□□□□□ -1.11
USP11-209ENST00000488848 SAMD13Q5VXD3 122 aa8.14□□□□□ -1.11
USP11-209ENST00000488848 C18orf65Q6ZTR6 163 aa8.14□□□□□ -1.11
USP11-209ENST00000488848 NARS2Q96I59 477 aaKnown RBP8.14□□□□□ -1.11
USP11-209ENST00000488848 C17orf77Q96MU5 243 aa8.14□□□□□ -1.11
USP11-209ENST00000488848 TMEM231Q9H6L2 316 aa8.14□□□□□ -1.11
USP11-209ENST00000488848 CMYA5Q8N3K9 4069 aa8.13□□□□□ -1.11
USP11-209ENST00000488848 TRBV19A0A075B6N1 114 aa8.13□□□□□ -1.11
USP11-209ENST00000488848 TRAV5A0A0B4J249 113 aa8.13□□□□□ -1.11
USP11-209ENST00000488848 HELTA6NFD8 242 aa8.13□□□□□ -1.11
USP11-209ENST00000488848 FAM74A7A6NL05 159 aa8.13□□□□□ -1.11
USP11-209ENST00000488848 CCL24O00175 119 aa8.13□□□□□ -1.11
USP11-209ENST00000488848 OR7C2O60412 319 aa8.13□□□□□ -1.11
USP11-209ENST00000488848 FGF8P55075 233 aaPredicted RBP8.13□□□□□ -1.11
USP11-209ENST00000488848 UBE2L3P68036 154 aaKnown RBP8.13□□□□□ -1.11
USP11-209ENST00000488848 MEF2BQ02080 365 aaPredicted RBP8.13□□□□□ -1.11
USP11-209ENST00000488848 ICAM4Q14773 271 aa8.13□□□□□ -1.11
USP11-209ENST00000488848 FAM90A2PQ658T7 463 aa8.13□□□□□ -1.11
USP11-209ENST00000488848 C8orf86Q6ZUL3 223 aa8.13□□□□□ -1.11
USP11-209ENST00000488848 COMMD7Q86VX2 200 aa8.13□□□□□ -1.11
USP11-209ENST00000488848 C11orf52Q96A22 123 aa8.13□□□□□ -1.11
USP11-209ENST00000488848 GRAMD2BQ96HH9 432 aa8.13□□□□□ -1.11
USP11-209ENST00000488848 OR5B12Q96R08 314 aa8.13□□□□□ -1.11
USP11-209ENST00000488848 CLEC5AQ9NY25 188 aa8.13□□□□□ -1.11
USP11-209ENST00000488848 VAX2Q9UIW0 290 aa8.13□□□□□ -1.11
USP11-209ENST00000488848 TRAV2A0A0B4J234 112 aa8.12□□□□□ -1.11
USP11-209ENST00000488848 IGHV3-35A0A0C4DH35 117 aa8.12□□□□□ -1.11
USP11-209ENST00000488848 C2orf70A6NJV1 201 aa8.12□□□□□ -1.11
USP11-209ENST00000488848 CHEK1O14757 476 aa8.12□□□□□ -1.11
USP11-209ENST00000488848 HMGB3O15347 200 aaKnown RBP8.12□□□□□ -1.11
USP11-209ENST00000488848 NDUFB4O95168 129 aa8.12□□□□□ -1.11
USP11-209ENST00000488848 NBEAP1P0C6P0 100 aa8.12□□□□□ -1.11
USP11-209ENST00000488848 PYYP10082 97 aa8.12□□□□□ -1.11
USP11-209ENST00000488848 GALR1P47211 349 aa8.12□□□□□ -1.11
USP11-209ENST00000488848 OR4F17Q8NGA8 305 aa8.12□□□□□ -1.11
USP11-209ENST00000488848 OR9G4Q8NGQ1 327 aa8.12□□□□□ -1.11
USP11-209ENST00000488848 DPF1Q92782 380 aa8.12□□□□□ -1.11
USP11-209ENST00000488848 OR4F4Q96R69 305 aa8.12□□□□□ -1.11
USP11-209ENST00000488848 ZNF747Q9BV97 191 aa8.12□□□□□ -1.11
USP11-209ENST00000488848 TMPRSS5Q9H3S3 457 aa8.12□□□□□ -1.11
USP11-209ENST00000488848 PEMTQ9UBM1 199 aa8.12□□□□□ -1.11
USP11-209ENST00000488848 SMAD5-AS1Q9Y6J3 95 aa8.12□□□□□ -1.11
USP11-209ENST00000488848 NBEAL1Q6ZS30 2694 aa8.12□□□□□ -1.11
USP11-209ENST00000488848 GGTLC3B5MD39 225 aa8.11□□□□□ -1.11
USP11-209ENST00000488848 H3BQ15 152 aa8.11□□□□□ -1.11
USP11-209ENST00000488848 SOCS3O14543 225 aa8.11□□□□□ -1.11
USP11-209ENST00000488848 PDE6DO43924 150 aa8.11□□□□□ -1.11
USP11-209ENST00000488848 APOHP02749 345 aaPredicted RBP8.11□□□□□ -1.11
USP11-209ENST00000488848 SYNJ2BPP57105 145 aa8.11□□□□□ -1.11
USP11-209ENST00000488848 CD81P60033 236 aa8.11□□□□□ -1.11
USP11-209ENST00000488848 SRSF2Q01130 221 aaKnown RBP8.11□□□□□ -1.11
USP11-209ENST00000488848 PEA15Q15121 130 aa8.11□□□□□ -1.11
USP11-209ENST00000488848 DEFB136Q30KP8 78 aa8.11□□□□□ -1.11
USP11-209ENST00000488848 TM4SF20Q53R12 229 aa8.11□□□□□ -1.11
USP11-209ENST00000488848 C10orf91Q5T1B1 145 aa8.11□□□□□ -1.11
USP11-209ENST00000488848 LEMD1Q68G75 181 aa8.11□□□□□ -1.11
USP11-209ENST00000488848 SIGLEC15Q6ZMC9 328 aa8.11□□□□□ -1.11
USP11-209ENST00000488848 ADAMTSL5Q6ZMM2 481 aa8.11□□□□□ -1.11
USP11-209ENST00000488848 OR8I2Q8N0Y5 310 aa8.11□□□□□ -1.11
USP11-209ENST00000488848 MRPL53Q96EL3 112 aaKnown RBP8.11□□□□□ -1.11
USP11-209ENST00000488848 SLC50A1Q9BRV3 221 aa8.11□□□□□ -1.11
USP11-209ENST00000488848 C20orf24Q9BUV8 137 aa8.11□□□□□ -1.11
USP11-209ENST00000488848 RHPN1-AS1Q9BWJ2 59 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms