RNA–Protein interactions for RNA: ENST00000488250.5

RAPGEF3-211, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2

Gene RAPGEF3, Length 1,947 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-211ENST00000488250 MT-ND6P03923 174 aa12.49□□□□□ -0.41
RAPGEF3-211ENST00000488250 ECSCRQ19T08 205 aa12.49□□□□□ -0.41
RAPGEF3-211ENST00000488250 PDZD11Q5EBL8 140 aa12.49□□□□□ -0.41
RAPGEF3-211ENST00000488250 WDR73Q6P4I2 378 aa12.49□□□□□ -0.41
RAPGEF3-211ENST00000488250 CMTM2Q8TAZ6 248 aa12.49□□□□□ -0.41
RAPGEF3-211ENST00000488250 ZNF414Q96IQ9 312 aa12.49□□□□□ -0.41
RAPGEF3-211ENST00000488250 ZNF492Q9P255 531 aa12.49□□□□□ -0.41
RAPGEF3-211ENST00000488250 IZUMO1RA6ND01 250 aa12.48□□□□□ -0.41
RAPGEF3-211ENST00000488250 CBLN1P23435 193 aa12.48□□□□□ -0.41
RAPGEF3-211ENST00000488250 S100A7P31151 101 aa12.48□□□□□ -0.41
RAPGEF3-211ENST00000488250 ADMP35318 185 aa12.48□□□□□ -0.41
RAPGEF3-211ENST00000488250 C15orf32Q32M92 178 aa12.48□□□□□ -0.41
RAPGEF3-211ENST00000488250 OR10D4PQ8NGN7 298 aa12.48□□□□□ -0.41
RAPGEF3-211ENST00000488250 SERTAD4Q9NUC0 356 aa12.48□□□□□ -0.41
RAPGEF3-211ENST00000488250 HELZ2Q9BYK8 2649 aaKnown RBP12.48□□□□□ -0.41
RAPGEF3-211ENST00000488250 FABP4P15090 132 aa12.47□□□□□ -0.41
RAPGEF3-211ENST00000488250 RHOGP84095 191 aa12.47□□□□□ -0.41
RAPGEF3-211ENST00000488250 C19orf54Q5BKX5 351 aa12.47□□□□□ -0.41
RAPGEF3-211ENST00000488250 EXOC3-AS1Q8N2X6 119 aa12.47□□□□□ -0.41
RAPGEF3-211ENST00000488250 MRPL18Q9H0U6 180 aaKnown RBP12.47□□□□□ -0.41
RAPGEF3-211ENST00000488250 NIT2Q9NQR4 276 aa12.47□□□□□ -0.41
RAPGEF3-211ENST00000488250 RPH3ALQ9UNE2 315 aa12.47□□□□□ -0.41
RAPGEF3-211ENST00000488250 TENM4Q6N022 2769 aa12.47□□□□□ -0.41
RAPGEF3-211ENST00000488250 B4DSR2 109 aa12.47□□□□□ -0.41
RAPGEF3-211ENST00000488250 IGLV2-11P01706 119 aa12.47□□□□□ -0.41
RAPGEF3-211ENST00000488250 IGHV3-23P01764 117 aa12.47□□□□□ -0.41
RAPGEF3-211ENST00000488250 AMY1AP04745 511 aa12.47□□□□□ -0.41
RAPGEF3-211ENST00000488250 SLC25A16P16260 332 aa12.47□□□□□ -0.41
RAPGEF3-211ENST00000488250 IER3P46695 156 aa12.47□□□□□ -0.41
RAPGEF3-211ENST00000488250 PYY3Q5JQD4 70 aa12.47□□□□□ -0.41
RAPGEF3-211ENST00000488250 DNLZQ5SXM8 178 aa12.47□□□□□ -0.41
RAPGEF3-211ENST00000488250 RASL11AQ6T310 242 aa12.47□□□□□ -0.41
RAPGEF3-211ENST00000488250 BRD3OSQ6XYD6 125 aa12.47□□□□□ -0.41
RAPGEF3-211ENST00000488250 Q86TA4 180 aa12.47□□□□□ -0.41
RAPGEF3-211ENST00000488250 BCL6BQ8N143 479 aaPredicted RBP12.47□□□□□ -0.41
RAPGEF3-211ENST00000488250 ATP6V0BQ99437 205 aa12.47□□□□□ -0.41
RAPGEF3-211ENST00000488250 PRSS22Q9GZN4 317 aa12.47□□□□□ -0.41
RAPGEF3-211ENST00000488250 ASH1LQ9NR48 2969 aaKnown RBP12.46□□□□□ -0.41
RAPGEF3-211ENST00000488250 IGHV3OR16-10A0A075B7F0 116 aa12.46□□□□□ -0.42
RAPGEF3-211ENST00000488250 LINC01548A6NM66 108 aa12.46□□□□□ -0.42
RAPGEF3-211ENST00000488250 IGHV4-38-2P0DP08 117 aa12.46□□□□□ -0.42
RAPGEF3-211ENST00000488250 RPL7P18124 248 aaKnown RBP12.46□□□□□ -0.42
RAPGEF3-211ENST00000488250 GATA3P23771 443 aa12.46□□□□□ -0.42
RAPGEF3-211ENST00000488250 CT83Q5H943 113 aa12.46□□□□□ -0.42
RAPGEF3-211ENST00000488250 ARL6IP6Q8N6S5 226 aa12.46□□□□□ -0.42
RAPGEF3-211ENST00000488250 TMEM75Q8N9X5 138 aa12.46□□□□□ -0.42
RAPGEF3-211ENST00000488250 WIPF2Q8TF74 440 aaPredicted RBP12.46□□□□□ -0.42
RAPGEF3-211ENST00000488250 TSKUQ8WUA8 353 aa12.46□□□□□ -0.42
RAPGEF3-211ENST00000488250 PACRGQ96M98 296 aaPredicted RBP12.46□□□□□ -0.42
RAPGEF3-211ENST00000488250 C17orf77Q96MU5 243 aa12.46□□□□□ -0.42
RAPGEF3-211ENST00000488250 RABAC1Q9UI14 185 aa12.46□□□□□ -0.42
RAPGEF3-211ENST00000488250 C19orf71A6NCJ1 209 aa12.45□□□□□ -0.42
RAPGEF3-211ENST00000488250 PCP4L1A6NKN8 68 aa12.45□□□□□ -0.42
RAPGEF3-211ENST00000488250 SNURFLB1AK76 121 aa12.45□□□□□ -0.42
RAPGEF3-211ENST00000488250 G3V318 75 aa12.45□□□□□ -0.42
RAPGEF3-211ENST00000488250 AMBPP02760 352 aa12.45□□□□□ -0.42
RAPGEF3-211ENST00000488250 COX6B1P14854 86 aa12.45□□□□□ -0.42
RAPGEF3-211ENST00000488250 TMEM136Q6ZRR5 245 aa12.45□□□□□ -0.42
RAPGEF3-211ENST00000488250 TRBV7-1A0A0A6YYK4 115 aa12.45□□□□□ -0.42
RAPGEF3-211ENST00000488250 TRAV20A0A0B4J274 112 aa12.45□□□□□ -0.42
RAPGEF3-211ENST00000488250 BMPR1BO00238 502 aa12.45□□□□□ -0.42
RAPGEF3-211ENST00000488250 CA1P00915 261 aaPredicted RBP12.45□□□□□ -0.42
RAPGEF3-211ENST00000488250 FRMD6-AS1P0C7T7 363 aa12.45□□□□□ -0.42
RAPGEF3-211ENST00000488250 TCL1AP56279 114 aa12.45□□□□□ -0.42
RAPGEF3-211ENST00000488250 SRSF1Q07955 248 aaKnown RBP eCLIP12.45□□□□□ -0.42
RAPGEF3-211ENST00000488250 PRR27Q6MZM9 219 aa12.45□□□□□ -0.42
RAPGEF3-211ENST00000488250 GOLT1AQ6ZVE7 132 aa12.45□□□□□ -0.42
RAPGEF3-211ENST00000488250 TMEM219Q86XT9 240 aa12.45□□□□□ -0.42
RAPGEF3-211ENST00000488250 SGK494Q96LW2 274 aa12.45□□□□□ -0.42
RAPGEF3-211ENST00000488250 NAT8BQ9UHF3 227 aa12.45□□□□□ -0.42
RAPGEF3-211ENST00000488250 UTP20O75691 2785 aaKnown RBP12.44□□□□□ -0.42
RAPGEF3-211ENST00000488250 PSG9Q00887 426 aa12.44□□□□□ -0.42
RAPGEF3-211ENST00000488250 EEF1AKMT3Q96AZ1 226 aa12.44□□□□□ -0.42
RAPGEF3-211ENST00000488250 ZFP30Q9Y2G7 519 aa12.44□□□□□ -0.42
RAPGEF3-211ENST00000488250 TRAV41A0A0B4J266 112 aa12.43□□□□□ -0.42
RAPGEF3-211ENST00000488250 A6NDX4 124 aa12.43□□□□□ -0.42
RAPGEF3-211ENST00000488250 SH2D7A6NKC9 451 aaPredicted RBP12.43□□□□□ -0.42
RAPGEF3-211ENST00000488250 K7EQM0 130 aa12.43□□□□□ -0.42
RAPGEF3-211ENST00000488250 ZNF253O75346 499 aa12.43□□□□□ -0.42
RAPGEF3-211ENST00000488250 BRI3O95415 125 aa12.43□□□□□ -0.42
RAPGEF3-211ENST00000488250 HLA-DQA1P01909 254 aa12.43□□□□□ -0.42
RAPGEF3-211ENST00000488250 CLEC3BP05452 202 aa12.43□□□□□ -0.42
RAPGEF3-211ENST00000488250 GPR183P32249 361 aa12.43□□□□□ -0.42
RAPGEF3-211ENST00000488250 GBGT1Q8N5D6 347 aa12.43□□□□□ -0.42
RAPGEF3-211ENST00000488250 CCDC140Q96MF4 163 aa12.43□□□□□ -0.42
RAPGEF3-211ENST00000488250 RPP21Q9H633 154 aaKnown RBP12.43□□□□□ -0.42
RAPGEF3-211ENST00000488250 ZFAND3Q9H8U3 227 aa12.43□□□□□ -0.42
RAPGEF3-211ENST00000488250 HIF1ANQ9NWT6 349 aa12.43□□□□□ -0.42
RAPGEF3-211ENST00000488250 SERTM2A0A1B0GWG4 89 aa12.43□□□□□ -0.42
RAPGEF3-211ENST00000488250 DIRC3C9JPN6 131 aa12.43□□□□□ -0.42
RAPGEF3-211ENST00000488250 NPIPB6E9PJ23 425 aa12.43□□□□□ -0.42
RAPGEF3-211ENST00000488250 IGF1P05019 195 aa12.43□□□□□ -0.42
RAPGEF3-211ENST00000488250 RAB9AP51151 201 aa12.43□□□□□ -0.42
RAPGEF3-211ENST00000488250 TOMM20LQ6UXN7 152 aa12.43□□□□□ -0.42
RAPGEF3-211ENST00000488250 LINC00322Q6ZN03 302 aaPredicted RBP12.43□□□□□ -0.42
RAPGEF3-211ENST00000488250 NUP35Q8NFH5 326 aa12.43□□□□□ -0.42
RAPGEF3-211ENST00000488250 AAMDCQ9H7C9 122 aa12.43□□□□□ -0.42
RAPGEF3-211ENST00000488250 M0QZK8 103 aa12.42□□□□□ -0.42
RAPGEF3-211ENST00000488250 Q0VG73 95 aa12.42□□□□□ -0.42
RAPGEF3-211ENST00000488250 ATP5L2Q7Z4Y8 100 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms