RNA–Protein interactions for RNA: ENST00000487245.5

HLA-C-208, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,880 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-208ENST00000487245 ADGRG4Q8IZF6 3080 aa20.62■□□□□ 0.89
HLA-C-208ENST00000487245 FAM19A2Q8N3H0 131 aa20.61■□□□□ 0.89
HLA-C-208ENST00000487245 SGK494Q96LW2 274 aa20.61■□□□□ 0.89
HLA-C-208ENST00000487245 SHANK2-AS3Q9BTD1 123 aa20.61■□□□□ 0.89
HLA-C-208ENST00000487245 TCF24Q7RTU0 167 aa20.6■□□□□ 0.89
HLA-C-208ENST00000487245 VMO1Q7Z5L0 202 aa20.6■□□□□ 0.89
HLA-C-208ENST00000487245 GTSF1Q8WW33 167 aa20.6■□□□□ 0.89
HLA-C-208ENST00000487245 DAZAP1Q96EP5 407 aaKnown RBP20.6■□□□□ 0.89
HLA-C-208ENST00000487245 TRAV30A0A087WSZ9 112 aa20.6■□□□□ 0.89
HLA-C-208ENST00000487245 A6NNC1 897 aa20.6■□□□□ 0.89
HLA-C-208ENST00000487245 NPIPB5A8MRT5 1133 aa20.6■□□□□ 0.89
HLA-C-208ENST00000487245 H3BRN7 92 aa20.6■□□□□ 0.89
HLA-C-208ENST00000487245 HSBP1O75506 76 aa20.6■□□□□ 0.89
HLA-C-208ENST00000487245 IGLV2-11P01706 119 aa20.6■□□□□ 0.89
HLA-C-208ENST00000487245 CAMPP49913 170 aa20.6■□□□□ 0.89
HLA-C-208ENST00000487245 ZNF562Q6V9R5 426 aa20.6■□□□□ 0.89
HLA-C-208ENST00000487245 RBPMS2Q6ZRY4 209 aaKnown RBP20.6■□□□□ 0.89
HLA-C-208ENST00000487245 S100A7AQ86SG5 101 aa20.6■□□□□ 0.89
HLA-C-208ENST00000487245 ABCA4P78363 2273 aa20.59■□□□□ 0.89
HLA-C-208ENST00000487245 EBI3Q14213 229 aa20.59■□□□□ 0.89
HLA-C-208ENST00000487245 LYPD1Q8N2G4 141 aa20.59■□□□□ 0.89
HLA-C-208ENST00000487245 LY6DQ14210 128 aa20.58■□□□□ 0.89
HLA-C-208ENST00000487245 SPATA45Q537H7 98 aa20.58■□□□□ 0.89
HLA-C-208ENST00000487245 SSBP4Q9BWG4 385 aaPredicted RBP20.58■□□□□ 0.89
HLA-C-208ENST00000487245 H3BTX0 84 aa20.58■□□□□ 0.88
HLA-C-208ENST00000487245 NTF3P20783 257 aa20.58■□□□□ 0.88
HLA-C-208ENST00000487245 PMCHL1Q16048 86 aa20.58■□□□□ 0.88
HLA-C-208ENST00000487245 TRBV19A0A075B6N1 114 aa20.57■□□□□ 0.88
HLA-C-208ENST00000487245 BPIFA4PQ86YQ2 179 aa20.57■□□□□ 0.88
HLA-C-208ENST00000487245 ZNF48Q96MX3 618 aaPredicted RBP20.57■□□□□ 0.88
HLA-C-208ENST00000487245 FAM181BA6NEQ2 426 aa20.56■□□□□ 0.88
HLA-C-208ENST00000487245 RPLP1P05386 114 aaKnown RBP20.56■□□□□ 0.88
HLA-C-208ENST00000487245 EFNA4P52798 201 aa20.56■□□□□ 0.88
HLA-C-208ENST00000487245 FOXA3P55318 350 aaPredicted RBP20.56■□□□□ 0.88
HLA-C-208ENST00000487245 Q8N6K4 173 aa20.56■□□□□ 0.88
HLA-C-208ENST00000487245 TMEM75Q8N9X5 138 aa20.56■□□□□ 0.88
HLA-C-208ENST00000487245 A0A1W2PRD5 423 aa20.56■□□□□ 0.88
HLA-C-208ENST00000487245 A0A1W2PRF3 423 aa20.56■□□□□ 0.88
HLA-C-208ENST00000487245 A0A1W2PRM7 423 aa20.56■□□□□ 0.88
HLA-C-208ENST00000487245 IGLC2P0DOY2 106 aa20.56■□□□□ 0.88
HLA-C-208ENST00000487245 DMRTA1Q5VZB9 504 aa20.56■□□□□ 0.88
HLA-C-208ENST00000487245 ARPC1AQ92747 370 aa20.56■□□□□ 0.88
HLA-C-208ENST00000487245 UQCR10Q9UDW1 63 aa20.56■□□□□ 0.88
HLA-C-208ENST00000487245 SMG1Q96Q15 3661 aaKnown RBP20.55■□□□□ 0.88
HLA-C-208ENST00000487245 M0R2Z0 102 aa20.55■□□□□ 0.88
HLA-C-208ENST00000487245 CD24P25063 80 aa20.55■□□□□ 0.88
HLA-C-208ENST00000487245 ZFP36P26651 326 aaKnown RBP20.55■□□□□ 0.88
HLA-C-208ENST00000487245 TTC9CQ8N5M4 171 aa20.55■□□□□ 0.88
HLA-C-208ENST00000487245 OR4F17Q8NGA8 305 aa20.55■□□□□ 0.88
HLA-C-208ENST00000487245 OR2D3Q8NGH3 330 aa20.55■□□□□ 0.88
HLA-C-208ENST00000487245 SIRPDQ9H106 197 aa20.55■□□□□ 0.88
HLA-C-208ENST00000487245 UBTD1Q9HAC8 227 aa20.55■□□□□ 0.88
HLA-C-208ENST00000487245 IGF2RP11717 2491 aa20.55■□□□□ 0.88
HLA-C-208ENST00000487245 A0A1W2PPR1 153 aa20.54■□□□□ 0.88
HLA-C-208ENST00000487245 WI2-2373I1.2A0A1W2PRP0 233 aa20.54■□□□□ 0.88
HLA-C-208ENST00000487245 IGLC3P0DOY3 106 aa20.54■□□□□ 0.88
HLA-C-208ENST00000487245 MFAP4P55083 255 aa20.54■□□□□ 0.88
HLA-C-208ENST00000487245 CYB5R2Q6BCY4 276 aa20.54■□□□□ 0.88
HLA-C-208ENST00000487245 KLHDC1Q8N7A1 406 aa20.54■□□□□ 0.88
HLA-C-208ENST00000487245 ZNF491Q8N8L2 437 aa20.54■□□□□ 0.88
HLA-C-208ENST00000487245 CHCHD1Q96BP2 118 aaKnown RBP20.54■□□□□ 0.88
HLA-C-208ENST00000487245 URB1-AS1Q96HZ7 61 aa20.54■□□□□ 0.88
HLA-C-208ENST00000487245 PGLYRP4Q96LB8 373 aa20.54■□□□□ 0.88
HLA-C-208ENST00000487245 ZFP30Q9Y2G7 519 aa20.54■□□□□ 0.88
HLA-C-208ENST00000487245 TPRP12270 2363 aaKnown RBP20.54■□□□□ 0.88
HLA-C-208ENST00000487245 IGLV11-55A0A075B6I3 123 aa20.54■□□□□ 0.88
HLA-C-208ENST00000487245 HAX1O00165 279 aa20.54■□□□□ 0.88
HLA-C-208ENST00000487245 MRPS12O15235 138 aaKnown RBP20.54■□□□□ 0.88
HLA-C-208ENST00000487245 GOLT1AQ6ZVE7 132 aa20.54■□□□□ 0.88
HLA-C-208ENST00000487245 EXOC3-AS1Q8N2X6 119 aa20.54■□□□□ 0.88
HLA-C-208ENST00000487245 COL8A1P27658 744 aa20.53■□□□□ 0.88
HLA-C-208ENST00000487245 RNASEKQ6P5S7 137 aaKnown RBP20.53■□□□□ 0.88
HLA-C-208ENST00000487245 SIGLEC15Q6ZMC9 328 aa20.53■□□□□ 0.88
HLA-C-208ENST00000487245 THYN1Q9P016 225 aa20.53■□□□□ 0.88
HLA-C-208ENST00000487245 KALRNO60229 2985 aa20.53■□□□□ 0.88
HLA-C-208ENST00000487245 C20orf202A1L168 122 aa20.52■□□□□ 0.88
HLA-C-208ENST00000487245 NCBP2LA6PVI3 153 aaKnown RBP20.52■□□□□ 0.88
HLA-C-208ENST00000487245 APOHP02749 345 aaPredicted RBP20.52■□□□□ 0.88
HLA-C-208ENST00000487245 BTF3P20290 206 aaKnown RBP20.52■□□□□ 0.88
HLA-C-208ENST00000487245 ITLN2Q8WWU7 325 aaPredicted RBP20.52■□□□□ 0.88
HLA-C-208ENST00000487245 RNF125Q96EQ8 232 aa20.52■□□□□ 0.88
HLA-C-208ENST00000487245 NDFIP1Q9BT67 221 aa20.52■□□□□ 0.88
HLA-C-208ENST00000487245 C1RLQ9NZP8 487 aa20.52■□□□□ 0.88
HLA-C-208ENST00000487245 IGHV2-70DA0A0C4DH43 119 aa20.52■□□□□ 0.87
HLA-C-208ENST00000487245 C2orf70A6NJV1 201 aa20.52■□□□□ 0.87
HLA-C-208ENST00000487245 GNG7O60262 68 aa20.52■□□□□ 0.87
HLA-C-208ENST00000487245 EBLN2Q6P2I7 272 aa20.52■□□□□ 0.87
HLA-C-208ENST00000487245 PRNTQ86SH4 94 aa20.52■□□□□ 0.87
HLA-C-208ENST00000487245 DYNAPQ8N1N2 210 aa20.52■□□□□ 0.87
HLA-C-208ENST00000487245 CIARTQ8N365 385 aaPredicted RBP20.52■□□□□ 0.87
HLA-C-208ENST00000487245 GATD1Q8NB37 220 aa20.52■□□□□ 0.87
HLA-C-208ENST00000487245 FANCD2OSQ96PS1 177 aa20.52■□□□□ 0.87
HLA-C-208ENST00000487245 TRAV8-1A0A0A6YYK1 113 aa20.51■□□□□ 0.87
HLA-C-208ENST00000487245 OVOL3O00110 214 aa20.51■□□□□ 0.87
HLA-C-208ENST00000487245 HLA-DRB1P01911 266 aa20.51■□□□□ 0.87
HLA-C-208ENST00000487245 TMEM11P17152 192 aa20.51■□□□□ 0.87
HLA-C-208ENST00000487245 ARHGAP32A7KAX9 2087 aa20.51■□□□□ 0.87
HLA-C-208ENST00000487245 ZNF785A8K8V0 405 aa20.5■□□□□ 0.87
HLA-C-208ENST00000487245 K7EQM0 130 aa20.5■□□□□ 0.87
HLA-C-208ENST00000487245 LOC102724200A0A096LPH7 203 aaPredicted RBP20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms