RNA–Protein interactions for RNA: ENST00000486810.5

COPS3-209, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 938 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-209ENST00000486810 TXNDC17Q9BRA2 123 aa4.22□□□□□ -1.73
COPS3-209ENST00000486810 SHANK2-AS3Q9BTD1 123 aa4.22□□□□□ -1.73
COPS3-209ENST00000486810 RTL8AQ9BWD3 113 aa4.22□□□□□ -1.73
COPS3-209ENST00000486810 PCTPQ9UKL6 214 aa4.22□□□□□ -1.73
COPS3-209ENST00000486810 KIAA1671Q9BY89 1806 aa4.22□□□□□ -1.73
COPS3-209ENST00000486810 TRPM6Q9BX84 2022 aa4.22□□□□□ -1.73
COPS3-209ENST00000486810 IGHV1-24A0A0C4DH33 117 aa4.21□□□□□ -1.74
COPS3-209ENST00000486810 NCBP2LA6PVI3 153 aaKnown RBP4.21□□□□□ -1.74
COPS3-209ENST00000486810 CEBPZOSA8MTT3 80 aa4.21□□□□□ -1.74
COPS3-209ENST00000486810 K7EM74 188 aa4.21□□□□□ -1.74
COPS3-209ENST00000486810 FFAR1O14842 300 aa4.21□□□□□ -1.74
COPS3-209ENST00000486810 PIN1P1O15428 100 aa4.21□□□□□ -1.74
COPS3-209ENST00000486810 PDCD6O75340 191 aa4.21□□□□□ -1.74
COPS3-209ENST00000486810 LYZL6O75951 148 aa4.21□□□□□ -1.74
COPS3-209ENST00000486810 APOHP02749 345 aaPredicted RBP4.21□□□□□ -1.74
COPS3-209ENST00000486810 FGF1P05230 155 aa4.21□□□□□ -1.74
COPS3-209ENST00000486810 SCGB1C2P0DMR2 95 aa4.21□□□□□ -1.74
COPS3-209ENST00000486810 SP4Q02446 784 aa4.21□□□□□ -1.74
COPS3-209ENST00000486810 MRPL55Q7Z7F7 128 aaKnown RBP4.21□□□□□ -1.74
COPS3-209ENST00000486810 AMN1Q8IY45 258 aa4.21□□□□□ -1.74
COPS3-209ENST00000486810 LINC01555Q8NAE3 123 aa4.21□□□□□ -1.74
COPS3-209ENST00000486810 IL1F10Q8WWZ1 152 aa4.21□□□□□ -1.74
COPS3-209ENST00000486810 COPS9Q8WXC6 57 aa4.21□□□□□ -1.74
COPS3-209ENST00000486810 DNAJA3Q96EY1 480 aa4.21□□□□□ -1.74
COPS3-209ENST00000486810 FOXC2Q99958 501 aa4.21□□□□□ -1.74
COPS3-209ENST00000486810 CHCHD5Q9BSY4 110 aa4.21□□□□□ -1.74
COPS3-209ENST00000486810 C16orf95Q9H693 158 aa4.21□□□□□ -1.74
COPS3-209ENST00000486810 PTPRBP23467 1997 aa4.21□□□□□ -1.74
COPS3-209ENST00000486810 KIAA1549Q9HCM3 1950 aa4.2□□□□□ -1.74
COPS3-209ENST00000486810 A8MWV9 139 aa4.2□□□□□ -1.74
COPS3-209ENST00000486810 SNURFLB1AK76 121 aa4.2□□□□□ -1.74
COPS3-209ENST00000486810 LINC01619G3V211 115 aa4.2□□□□□ -1.74
COPS3-209ENST00000486810 P01737 135 aa4.2□□□□□ -1.74
COPS3-209ENST00000486810 CD7P09564 240 aa4.2□□□□□ -1.74
COPS3-209ENST00000486810 HLA-DRB4P13762 266 aa4.2□□□□□ -1.74
COPS3-209ENST00000486810 LIFP15018 202 aa4.2□□□□□ -1.74
COPS3-209ENST00000486810 CXCL5P42830 114 aa4.2□□□□□ -1.74
COPS3-209ENST00000486810 GFERP55789 205 aa4.2□□□□□ -1.74
COPS3-209ENST00000486810 DSCR4P56555 118 aaPredicted RBP4.2□□□□□ -1.74
COPS3-209ENST00000486810 CLDN17P56750 224 aa4.2□□□□□ -1.74
COPS3-209ENST00000486810 SUPT4H1P63272 117 aaKnown RBP4.2□□□□□ -1.74
COPS3-209ENST00000486810 TMEM207Q6UWW9 146 aa4.2□□□□□ -1.74
COPS3-209ENST00000486810 Q6ZQT7 251 aa4.2□□□□□ -1.74
COPS3-209ENST00000486810 PRR15Q8IV56 129 aa4.2□□□□□ -1.74
COPS3-209ENST00000486810 OR52N5Q8NH56 324 aa4.2□□□□□ -1.74
COPS3-209ENST00000486810 FAM57AQ8TBR7 257 aa4.2□□□□□ -1.74
COPS3-209ENST00000486810 LRRC29Q8WV35 223 aa4.2□□□□□ -1.74
COPS3-209ENST00000486810 TMEM230Q96A57 120 aa4.2□□□□□ -1.74
COPS3-209ENST00000486810 C18orf15Q96N68 181 aa4.2□□□□□ -1.74
COPS3-209ENST00000486810 ODF3Q96PU9 254 aa4.2□□□□□ -1.74
COPS3-209ENST00000486810 C11orf1Q9H5F2 150 aa4.2□□□□□ -1.74
COPS3-209ENST00000486810 ZNF331Q9NQX6 463 aaPredicted RBP4.2□□□□□ -1.74
COPS3-209ENST00000486810 PHPT1Q9NRX4 125 aaPredicted RBP4.2□□□□□ -1.74
COPS3-209ENST00000486810 ANAPC10Q9UM13 185 aa4.2□□□□□ -1.74
COPS3-209ENST00000486810 HILPDAQ9Y5L2 63 aa4.2□□□□□ -1.74
COPS3-209ENST00000486810 SERP1Q9Y6X1 66 aa4.2□□□□□ -1.74
COPS3-209ENST00000486810 HLA-DRB4X5D2U9 266 aa4.2□□□□□ -1.74
COPS3-209ENST00000486810 ANAPC1Q9H1A4 1944 aa4.2□□□□□ -1.74
COPS3-209ENST00000486810 NUP214P35658 2090 aaPredicted RBP4.2□□□□□ -1.74
COPS3-209ENST00000486810 SCN10AQ9Y5Y9 1956 aa4.2□□□□□ -1.74
COPS3-209ENST00000486810 IGLV5-45A0A087WSX0 123 aa4.19□□□□□ -1.74
COPS3-209ENST00000486810 TRAV2A0A0B4J234 112 aa4.19□□□□□ -1.74
COPS3-209ENST00000486810 MDFIC2A0A1B0GVS7 189 aa4.19□□□□□ -1.74
COPS3-209ENST00000486810 ZFP92A6NM28 416 aa4.19□□□□□ -1.74
COPS3-209ENST00000486810 IGKCP01834 107 aa4.19□□□□□ -1.74
COPS3-209ENST00000486810 GYPBP06028 91 aa4.19□□□□□ -1.74
COPS3-209ENST00000486810 IGKV5-2P06315 115 aa4.19□□□□□ -1.74
COPS3-209ENST00000486810 ASAH2BP0C7U1 165 aa4.19□□□□□ -1.74
COPS3-209ENST00000486810 COX6A1P12074 109 aa4.19□□□□□ -1.74
COPS3-209ENST00000486810 UBE2E1P51965 193 aa4.19□□□□□ -1.74
COPS3-209ENST00000486810 FBXW4P57775 412 aa4.19□□□□□ -1.74
COPS3-209ENST00000486810 RPL38P63173 70 aaKnown RBP4.19□□□□□ -1.74
COPS3-209ENST00000486810 MRPS36P82909 103 aaKnown RBP4.19□□□□□ -1.74
COPS3-209ENST00000486810 QRFPP83859 136 aa4.19□□□□□ -1.74
COPS3-209ENST00000486810 SRYQ05066 204 aa4.19□□□□□ -1.74
COPS3-209ENST00000486810 ARFRP1Q13795 201 aa4.19□□□□□ -1.74
COPS3-209ENST00000486810 FAM78AQ5JUQ0 283 aa4.19□□□□□ -1.74
COPS3-209ENST00000486810 FAM120AOSQ5T036 256 aa4.19□□□□□ -1.74
COPS3-209ENST00000486810 ZC2HC1BQ5TFG8 222 aa4.19□□□□□ -1.74
COPS3-209ENST00000486810 MMD2Q8IY49 270 aa4.19□□□□□ -1.74
COPS3-209ENST00000486810 OR5AS1Q8N127 324 aa4.19□□□□□ -1.74
COPS3-209ENST00000486810 LINC01561Q8N1V8 128 aa4.19□□□□□ -1.74
COPS3-209ENST00000486810 ZCCHC24Q8N2G6 241 aaKnown RBP4.19□□□□□ -1.74
COPS3-209ENST00000486810 FAM19A2Q8N3H0 131 aa4.19□□□□□ -1.74
COPS3-209ENST00000486810 OR2T6Q8NHC8 308 aa4.19□□□□□ -1.74
COPS3-209ENST00000486810 TMEM158Q8WZ71 300 aa4.19□□□□□ -1.74
COPS3-209ENST00000486810 NABP1Q96AH0 204 aa4.19□□□□□ -1.74
COPS3-209ENST00000486810 ZNF524Q96C55 264 aa4.19□□□□□ -1.74
COPS3-209ENST00000486810 UBE2E2Q96LR5 201 aa4.19□□□□□ -1.74
COPS3-209ENST00000486810 C17orf77Q96MU5 243 aa4.19□□□□□ -1.74
COPS3-209ENST00000486810 S1PR3Q99500 378 aa4.19□□□□□ -1.74
COPS3-209ENST00000486810 OTORQ9NRC9 128 aa4.19□□□□□ -1.74
COPS3-209ENST00000486810 PILRAQ9UKJ1 303 aa4.19□□□□□ -1.74
COPS3-209ENST00000486810 DOCK4Q8N1I0 1966 aa4.19□□□□□ -1.74
COPS3-209ENST00000486810 LCTP09848 1927 aa4.19□□□□□ -1.74
COPS3-209ENST00000486810 NCOA6Q14686 2063 aaPredicted RBP4.18□□□□□ -1.74
COPS3-209ENST00000486810 TRBV19A0A075B6N1 114 aa4.18□□□□□ -1.74
COPS3-209ENST00000486810 TRGV5A0A0B4J1U4 118 aa4.18□□□□□ -1.74
COPS3-209ENST00000486810 TRBV5-5A0A0J9YX44 114 aa4.18□□□□□ -1.74
COPS3-209ENST00000486810 H3BT86 120 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms