RNA–Protein interactions for RNA: ENST00000485247.1

PTPN4-210, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-210ENST00000485247 IGLC1P0CG04 106 aa3.48□□□□□ -1.85
PTPN4-210ENST00000485247 SUB1P53999 127 aaKnown RBP eCLIP3.48□□□□□ -1.85
PTPN4-210ENST00000485247 WNT4P56705 351 aa3.48□□□□□ -1.85
PTPN4-210ENST00000485247 ARPC4P59998 168 aa3.48□□□□□ -1.85
PTPN4-210ENST00000485247 YPEL3P61236 119 aaPredicted RBP3.48□□□□□ -1.85
PTPN4-210ENST00000485247 HSPE1P61604 102 aaKnown RBP3.48□□□□□ -1.85
PTPN4-210ENST00000485247 WFDC2Q14508 124 aa3.48□□□□□ -1.85
PTPN4-210ENST00000485247 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.48□□□□□ -1.85
PTPN4-210ENST00000485247 SFXN4Q6P4A7 337 aa3.48□□□□□ -1.85
PTPN4-210ENST00000485247 Q6ZRU5 148 aa3.48□□□□□ -1.85
PTPN4-210ENST00000485247 TMEM256Q8N2U0 113 aa3.48□□□□□ -1.85
PTPN4-210ENST00000485247 C10orf126Q8N4M7 172 aa3.48□□□□□ -1.85
PTPN4-210ENST00000485247 LRTM2Q8N967 370 aa3.48□□□□□ -1.85
PTPN4-210ENST00000485247 OR51G1Q8NGK1 321 aa3.48□□□□□ -1.85
PTPN4-210ENST00000485247 OR6F1Q8NGZ6 308 aa3.48□□□□□ -1.85
PTPN4-210ENST00000485247 TMEM263Q8WUH6 116 aaKnown RBP3.48□□□□□ -1.85
PTPN4-210ENST00000485247 TMEM18Q96B42 140 aa3.48□□□□□ -1.85
PTPN4-210ENST00000485247 ATG5Q9H1Y0 275 aa3.48□□□□□ -1.85
PTPN4-210ENST00000485247 Q9HAA7 133 aa3.48□□□□□ -1.85
PTPN4-210ENST00000485247 DAPK2Q9UIK4 370 aa3.48□□□□□ -1.85
PTPN4-210ENST00000485247 RCL1Q9Y2P8 373 aaKnown RBP3.48□□□□□ -1.85
PTPN4-210ENST00000485247 FSIP2Q5CZC0 6907 aa3.48□□□□□ -1.85
PTPN4-210ENST00000485247 TNXBP22105 4242 aa3.47□□□□□ -1.85
PTPN4-210ENST00000485247 TRGV2A0A075B6R0 118 aa3.47□□□□□ -1.85
PTPN4-210ENST00000485247 TRAV5A0A0B4J249 113 aa3.47□□□□□ -1.85
PTPN4-210ENST00000485247 A0A0B4J293 547 aa3.47□□□□□ -1.85
PTPN4-210ENST00000485247 METTL21EPA6NDL7 271 aa3.47□□□□□ -1.85
PTPN4-210ENST00000485247 BOLA2-SMG1P6H3BVE0 249 aa3.47□□□□□ -1.85
PTPN4-210ENST00000485247 PGLYRP1O75594 196 aaPredicted RBP3.47□□□□□ -1.85
PTPN4-210ENST00000485247 DUSP14O95147 198 aaKnown RBP3.47□□□□□ -1.85
PTPN4-210ENST00000485247 FCER2P06734 321 aa3.47□□□□□ -1.85
PTPN4-210ENST00000485247 RD3LP0DJH9 198 aa3.47□□□□□ -1.85
PTPN4-210ENST00000485247 RNASE2P10153 161 aaKnown RBP3.47□□□□□ -1.85
PTPN4-210ENST00000485247 ZNF182P17025 639 aaPredicted RBP3.47□□□□□ -1.85
PTPN4-210ENST00000485247 OR10J1P30954 320 aa3.47□□□□□ -1.85
PTPN4-210ENST00000485247 ETV6P41212 452 aa3.47□□□□□ -1.85
PTPN4-210ENST00000485247 RND2P52198 227 aa3.47□□□□□ -1.85
PTPN4-210ENST00000485247 GNG2P59768 71 aa3.47□□□□□ -1.85
PTPN4-210ENST00000485247 GAMTQ14353 236 aa3.47□□□□□ -1.85
PTPN4-210ENST00000485247 DNAL1Q4LDG9 190 aa3.47□□□□□ -1.85
PTPN4-210ENST00000485247 Q6ZTI0 123 aa3.47□□□□□ -1.85
PTPN4-210ENST00000485247 H2BFWTQ7Z2G1 175 aa3.47□□□□□ -1.85
PTPN4-210ENST00000485247 NEXN-AS1Q8NBZ9 246 aa3.47□□□□□ -1.85
PTPN4-210ENST00000485247 OR1S2Q8NGQ3 325 aa3.47□□□□□ -1.85
PTPN4-210ENST00000485247 PBDC1Q9BVG4 233 aa3.47□□□□□ -1.85
PTPN4-210ENST00000485247 DPH3P1Q9H4G8 78 aa3.47□□□□□ -1.85
PTPN4-210ENST00000485247 ARGLU1Q9NWB6 273 aaPredicted RBP3.47□□□□□ -1.85
PTPN4-210ENST00000485247 CRCT1Q9UGL9 99 aa3.47□□□□□ -1.85
PTPN4-210ENST00000485247 V9GY05 133 aa3.47□□□□□ -1.85
PTPN4-210ENST00000485247 MUC2Q02817 5179 aa3.47□□□□□ -1.85
PTPN4-210ENST00000485247 FAT4Q6V0I7 4981 aa3.46□□□□□ -1.86
PTPN4-210ENST00000485247 A0A087WYN8 130 aa3.46□□□□□ -1.86
PTPN4-210ENST00000485247 RBFOX3A6NFN3 312 aa3.46□□□□□ -1.86
PTPN4-210ENST00000485247 SNURFLB1AK76 121 aa3.46□□□□□ -1.86
PTPN4-210ENST00000485247 SSX5O60225 188 aa3.46□□□□□ -1.86
PTPN4-210ENST00000485247 ZNF324O75467 553 aaPredicted RBP3.46□□□□□ -1.86
PTPN4-210ENST00000485247 CCNKO75909 580 aa3.46□□□□□ -1.86
PTPN4-210ENST00000485247 SCGB1D1O95968 90 aa3.46□□□□□ -1.86
PTPN4-210ENST00000485247 MT3P25713 68 aa3.46□□□□□ -1.86
PTPN4-210ENST00000485247 CALRP27797 417 aaKnown RBP3.46□□□□□ -1.86
PTPN4-210ENST00000485247 RANBP1P43487 201 aa3.46□□□□□ -1.86
PTPN4-210ENST00000485247 RPL5P46777 297 aaKnown RBP3.46□□□□□ -1.86
PTPN4-210ENST00000485247 HSPA13P48723 471 aa3.46□□□□□ -1.86
PTPN4-210ENST00000485247 OR10A3P58181 314 aa3.46□□□□□ -1.86
PTPN4-210ENST00000485247 RHOBP62745 196 aa3.46□□□□□ -1.86
PTPN4-210ENST00000485247 RPS25P62851 125 aaKnown RBP3.46□□□□□ -1.86
PTPN4-210ENST00000485247 CD300CQ08708 224 aa3.46□□□□□ -1.86
PTPN4-210ENST00000485247 ZNF415Q09FC8 603 aa3.46□□□□□ -1.86
PTPN4-210ENST00000485247 ASAH1Q13510 395 aa3.46□□□□□ -1.86
PTPN4-210ENST00000485247 ARL6IP1Q15041 203 aa3.46□□□□□ -1.86
PTPN4-210ENST00000485247 IZUMO4Q1ZYL8 232 aa3.46□□□□□ -1.86
PTPN4-210ENST00000485247 MZT2BQ6NZ67 158 aa3.46□□□□□ -1.86
PTPN4-210ENST00000485247 PRSS54Q6PEW0 395 aa3.46□□□□□ -1.86
PTPN4-210ENST00000485247 TMEM91Q6ZNR0 172 aa3.46□□□□□ -1.86
PTPN4-210ENST00000485247 NEGR1Q7Z3B1 354 aa3.46□□□□□ -1.86
PTPN4-210ENST00000485247 SLC35G3Q8N808 338 aa3.46□□□□□ -1.86
PTPN4-210ENST00000485247 BEST4Q8NFU0 473 aa3.46□□□□□ -1.86
PTPN4-210ENST00000485247 A0A1B0GUV1 79 aa3.45□□□□□ -1.86
PTPN4-210ENST00000485247 USP17L23D6RBM5 183 aa3.45□□□□□ -1.86
PTPN4-210ENST00000485247 INS-IGF2F8WCM5 200 aa3.45□□□□□ -1.86
PTPN4-210ENST00000485247 H7BYZ3 331 aa3.45□□□□□ -1.86
PTPN4-210ENST00000485247 PAGE4O60829 102 aa3.45□□□□□ -1.86
PTPN4-210ENST00000485247 PRAF2O60831 178 aa3.45□□□□□ -1.86
PTPN4-210ENST00000485247 ARL6IP5O75915 188 aa3.45□□□□□ -1.86
PTPN4-210ENST00000485247 IGKV1-39P01597 117 aa3.45□□□□□ -1.86
PTPN4-210ENST00000485247 IGHV3-53P01767 116 aa3.45□□□□□ -1.86
PTPN4-210ENST00000485247 IGKV1D-39P04432 117 aa3.45□□□□□ -1.86
PTPN4-210ENST00000485247 NUP62P37198 522 aaPredicted RBP3.45□□□□□ -1.86
PTPN4-210ENST00000485247 HERV-K104P61576 105 aa3.45□□□□□ -1.86
PTPN4-210ENST00000485247 SUPT4H1P63272 117 aaKnown RBP3.45□□□□□ -1.86
PTPN4-210ENST00000485247 RPL36AP83881 106 aaKnown RBP3.45□□□□□ -1.86
PTPN4-210ENST00000485247 MRPL23Q16540 153 aaKnown RBP3.45□□□□□ -1.86
PTPN4-210ENST00000485247 C1orf146Q5VVC0 180 aa3.45□□□□□ -1.86
PTPN4-210ENST00000485247 AHSA2Q719I0 299 aa3.45□□□□□ -1.86
PTPN4-210ENST00000485247 OR8I2Q8N0Y5 310 aa3.45□□□□□ -1.86
PTPN4-210ENST00000485247 RNF182Q8N6D2 247 aa3.45□□□□□ -1.86
PTPN4-210ENST00000485247 BORCS5Q969J3 196 aa3.45□□□□□ -1.86
PTPN4-210ENST00000485247 MRGPRFQ96AM1 343 aa3.45□□□□□ -1.86
PTPN4-210ENST00000485247 PPP1R14BQ96C90 147 aa3.45□□□□□ -1.86
PTPN4-210ENST00000485247 SEC22AQ96IW7 307 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms