RNA–Protein interactions for RNA: ENST00000484252.5

LIMS2-215, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 2,099 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-215ENST00000484252 OR4C5Q8NGB2 326 aa15.61■□□□□ 0.09
LIMS2-215ENST00000484252 CHCHD1Q96BP2 118 aaKnown RBP15.61■□□□□ 0.09
LIMS2-215ENST00000484252 SHANK2-AS3Q9BTD1 123 aa15.61■□□□□ 0.09
LIMS2-215ENST00000484252 ARFGEF3Q5TH69 2177 aa15.61■□□□□ 0.09
LIMS2-215ENST00000484252 CNIH1O95406 144 aa15.61■□□□□ 0.09
LIMS2-215ENST00000484252 IGKV1-17P01599 117 aa15.61■□□□□ 0.09
LIMS2-215ENST00000484252 COL8A1P27658 744 aa15.61■□□□□ 0.09
LIMS2-215ENST00000484252 EBLN2Q6P2I7 272 aa15.61■□□□□ 0.09
LIMS2-215ENST00000484252 TRAV30A0A087WSZ9 112 aa15.6■□□□□ 0.09
LIMS2-215ENST00000484252 IGLV2-11P01706 119 aa15.6■□□□□ 0.09
LIMS2-215ENST00000484252 C16orf54Q6UWD8 224 aa15.6■□□□□ 0.09
LIMS2-215ENST00000484252 BPIFA4PQ86YQ2 179 aa15.6■□□□□ 0.09
LIMS2-215ENST00000484252 LYPD1Q8N2G4 141 aa15.6■□□□□ 0.09
LIMS2-215ENST00000484252 ACACAQ13085 2346 aa15.6■□□□□ 0.09
LIMS2-215ENST00000484252 MAP1BP46821 2468 aaKnown RBP15.6■□□□□ 0.09
LIMS2-215ENST00000484252 LOC105371242A0A075B767 164 aa15.59■□□□□ 0.09
LIMS2-215ENST00000484252 TRAV9-2A0A087WT02 112 aa15.59■□□□□ 0.09
LIMS2-215ENST00000484252 K7EIM0 57 aa15.59■□□□□ 0.09
LIMS2-215ENST00000484252 FBXL19-AS1Q494R0 122 aa15.59■□□□□ 0.09
LIMS2-215ENST00000484252 ZNF672Q499Z4 452 aaPredicted RBP15.59■□□□□ 0.09
LIMS2-215ENST00000484252 GOLT1AQ6ZVE7 132 aa15.59■□□□□ 0.09
LIMS2-215ENST00000484252 OR4F17Q8NGA8 305 aa15.59■□□□□ 0.09
LIMS2-215ENST00000484252 ONECUT1Q9UBC0 465 aa15.59■□□□□ 0.09
LIMS2-215ENST00000484252 MUC6Q6W4X9 2439 aa15.59■□□□□ 0.09
LIMS2-215ENST00000484252 TRBV19A0A075B6N1 114 aa15.59■□□□□ 0.09
LIMS2-215ENST00000484252 C2orf70A6NJV1 201 aa15.59■□□□□ 0.09
LIMS2-215ENST00000484252 H3BRN7 92 aa15.59■□□□□ 0.09
LIMS2-215ENST00000484252 K7ENP7 123 aa15.59■□□□□ 0.09
LIMS2-215ENST00000484252 HAX1O00165 279 aa15.59■□□□□ 0.09
LIMS2-215ENST00000484252 TIMM23O14925 209 aa15.59■□□□□ 0.09
LIMS2-215ENST00000484252 TMEM75Q8N9X5 138 aa15.59■□□□□ 0.09
LIMS2-215ENST00000484252 NDFIP1Q9BT67 221 aa15.59■□□□□ 0.09
LIMS2-215ENST00000484252 CHEK1O14757 476 aa15.58■□□□□ 0.09
LIMS2-215ENST00000484252 HTR1DP28221 377 aa15.58■□□□□ 0.09
LIMS2-215ENST00000484252 HINT1P49773 126 aaPredicted RBP15.58■□□□□ 0.09
LIMS2-215ENST00000484252 FOXA3P55318 350 aaPredicted RBP15.58■□□□□ 0.09
LIMS2-215ENST00000484252 LCN12Q6JVE5 192 aa15.58■□□□□ 0.09
LIMS2-215ENST00000484252 S100A7AQ86SG5 101 aa15.58■□□□□ 0.09
LIMS2-215ENST00000484252 PRNTQ86SH4 94 aa15.58■□□□□ 0.09
LIMS2-215ENST00000484252 EXOC3-AS1Q8N2X6 119 aa15.58■□□□□ 0.09
LIMS2-215ENST00000484252 LINC01560Q8TB33 94 aa15.58■□□□□ 0.09
LIMS2-215ENST00000484252 URB1-AS1Q96HZ7 61 aa15.58■□□□□ 0.09
LIMS2-215ENST00000484252 C1RLQ9NZP8 487 aa15.58■□□□□ 0.09
LIMS2-215ENST00000484252 K7EQM0 130 aa15.58■□□□□ 0.08
LIMS2-215ENST00000484252 NBR2O15453 112 aa15.58■□□□□ 0.08
LIMS2-215ENST00000484252 UNQ5815/PRO19632Q6UWF5 114 aa15.58■□□□□ 0.08
LIMS2-215ENST00000484252 CIARTQ8N365 385 aaPredicted RBP15.58■□□□□ 0.08
LIMS2-215ENST00000484252 OR11H6Q8NGC7 330 aa15.58■□□□□ 0.08
LIMS2-215ENST00000484252 DPM3Q9P2X0 92 aa15.58■□□□□ 0.08
LIMS2-215ENST00000484252 LOC102724200A0A096LPH7 203 aaPredicted RBP15.57■□□□□ 0.08
LIMS2-215ENST00000484252 TRAV8-1A0A0A6YYK1 113 aa15.57■□□□□ 0.08
LIMS2-215ENST00000484252 CEACAM3P40198 252 aa15.57■□□□□ 0.08
LIMS2-215ENST00000484252 NPBQ8NG41 125 aa15.57■□□□□ 0.08
LIMS2-215ENST00000484252 TMEM70Q9BUB7 260 aa15.57■□□□□ 0.08
LIMS2-215ENST00000484252 PLXNB1O43157 2135 aa15.57■□□□□ 0.08
LIMS2-215ENST00000484252 APC2O95996 2303 aa15.56■□□□□ 0.08
LIMS2-215ENST00000484252 Q56UQ5 140 aa15.56■□□□□ 0.08
LIMS2-215ENST00000484252 RAB1BQ9H0U4 201 aa15.56■□□□□ 0.08
LIMS2-215ENST00000484252 NDUFA3O95167 84 aa15.56■□□□□ 0.08
LIMS2-215ENST00000484252 ATOH7Q8N100 152 aa15.56■□□□□ 0.08
LIMS2-215ENST00000484252 PCNX1Q96RV3 2341 aa15.55■□□□□ 0.08
LIMS2-215ENST00000484252 MALRD1Q5VYJ5 2156 aa15.55■□□□□ 0.08
LIMS2-215ENST00000484252 CRXO43186 299 aaPredicted RBP15.55■□□□□ 0.08
LIMS2-215ENST00000484252 APOHP02749 345 aaPredicted RBP15.55■□□□□ 0.08
LIMS2-215ENST00000484252 ZNF491Q8N8L2 437 aa15.55■□□□□ 0.08
LIMS2-215ENST00000484252 RNF125Q96EQ8 232 aa15.55■□□□□ 0.08
LIMS2-215ENST00000484252 ROS1P08922 2347 aa15.55■□□□□ 0.08
LIMS2-215ENST00000484252 DMXL2Q8TDJ6 3036 aa15.55■□□□□ 0.08
LIMS2-215ENST00000484252 HLA-DRB1P01911 266 aa15.55■□□□□ 0.08
LIMS2-215ENST00000484252 FAM120AOSQ5T036 256 aa15.55■□□□□ 0.08
LIMS2-215ENST00000484252 SIGLEC15Q6ZMC9 328 aa15.55■□□□□ 0.08
LIMS2-215ENST00000484252 CFHR4Q92496 578 aa15.55■□□□□ 0.08
LIMS2-215ENST00000484252 SMG1Q96Q15 3661 aaKnown RBP15.54■□□□□ 0.08
LIMS2-215ENST00000484252 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP15.54■□□□□ 0.08
LIMS2-215ENST00000484252 A0A1B0GW15 77 aa15.54■□□□□ 0.08
LIMS2-215ENST00000484252 WI2-2373I1.2A0A1W2PRP0 233 aa15.54■□□□□ 0.08
LIMS2-215ENST00000484252 OR5AL1P0C617 328 aa15.54■□□□□ 0.08
LIMS2-215ENST00000484252 RHOGP84095 191 aa15.54■□□□□ 0.08
LIMS2-215ENST00000484252 LDLRAD2Q5SZI1 272 aa15.54■□□□□ 0.08
LIMS2-215ENST00000484252 TIMD4Q96H15 378 aa15.54■□□□□ 0.08
LIMS2-215ENST00000484252 IGHV1-24A0A0C4DH33 117 aa15.53■□□□□ 0.08
LIMS2-215ENST00000484252 FAM90A27PA6NNH2 459 aa15.53■□□□□ 0.08
LIMS2-215ENST00000484252 M0R1W7 72 aa15.53■□□□□ 0.08
LIMS2-215ENST00000484252 FOXC1Q12948 553 aa15.53■□□□□ 0.08
LIMS2-215ENST00000484252 RIGQ13278 110 aa15.53■□□□□ 0.08
LIMS2-215ENST00000484252 RNF151Q2KHN1 245 aa15.53■□□□□ 0.08
LIMS2-215ENST00000484252 GATD1Q8NB37 220 aa15.53■□□□□ 0.08
LIMS2-215ENST00000484252 ZNF48Q96MX3 618 aaPredicted RBP15.53■□□□□ 0.08
LIMS2-215ENST00000484252 PSG8Q9UQ74 426 aa15.53■□□□□ 0.08
LIMS2-215ENST00000484252 PKDREJQ9NTG1 2253 aa15.53■□□□□ 0.08
LIMS2-215ENST00000484252 PIEZO2Q9H5I5 2752 aa15.53■□□□□ 0.08
LIMS2-215ENST00000484252 A0A1B0GUT8 65 aa15.53■□□□□ 0.08
LIMS2-215ENST00000484252 PSG3Q16557 428 aa15.53■□□□□ 0.08
LIMS2-215ENST00000484252 ZC2HC1AQ96GY0 325 aa15.53■□□□□ 0.08
LIMS2-215ENST00000484252 CLEC5AQ9NY25 188 aa15.53■□□□□ 0.08
LIMS2-215ENST00000484252 MRPS12O15235 138 aaKnown RBP15.52■□□□□ 0.08
LIMS2-215ENST00000484252 TOX4O94842 621 aa15.52■□□□□ 0.08
LIMS2-215ENST00000484252 IL4P05112 153 aa15.52■□□□□ 0.08
LIMS2-215ENST00000484252 VAMP3Q15836 100 aa15.52■□□□□ 0.08
LIMS2-215ENST00000484252 MAJINQ3KP22 176 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms