RNA–Protein interactions for RNA: ENST00000484203.5

PTCD3-215, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 928 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-215ENST00000484203 ZNF79Q15937 498 aa4.5□□□□□ -1.69
PTCD3-215ENST00000484203 C4orf46Q504U0 113 aa4.5□□□□□ -1.69
PTCD3-215ENST00000484203 PSMG4Q5JS54 123 aa4.5□□□□□ -1.69
PTCD3-215ENST00000484203 ACTL10Q5JWF8 245 aa4.5□□□□□ -1.69
PTCD3-215ENST00000484203 LINC00299Q6ZSB3 139 aa4.5□□□□□ -1.69
PTCD3-215ENST00000484203 OR8I2Q8N0Y5 310 aa4.5□□□□□ -1.69
PTCD3-215ENST00000484203 BPIFCQ8NFQ6 507 aa4.5□□□□□ -1.69
PTCD3-215ENST00000484203 OR4D5Q8NGN0 318 aa4.5□□□□□ -1.69
PTCD3-215ENST00000484203 PHLDA1Q8WV24 401 aaPredicted RBP4.5□□□□□ -1.69
PTCD3-215ENST00000484203 TMEM170AQ8WVE7 144 aa4.5□□□□□ -1.69
PTCD3-215ENST00000484203 RAB40CQ96S21 281 aa4.5□□□□□ -1.69
PTCD3-215ENST00000484203 PBDC1Q9BVG4 233 aa4.5□□□□□ -1.69
PTCD3-215ENST00000484203 RBM38Q9H0Z9 239 aaKnown RBP4.5□□□□□ -1.69
PTCD3-215ENST00000484203 TBC1D24Q9ULP9 559 aa4.5□□□□□ -1.69
PTCD3-215ENST00000484203 PAIP2BQ9ULR5 123 aaKnown RBP4.5□□□□□ -1.69
PTCD3-215ENST00000484203 CSMD3Q7Z407 3707 aa4.5□□□□□ -1.69
PTCD3-215ENST00000484203 C9orf170A2RU37 121 aa4.49□□□□□ -1.69
PTCD3-215ENST00000484203 ZNF705EA8MWA4 302 aaPredicted RBP4.49□□□□□ -1.69
PTCD3-215ENST00000484203 HOXB5P09067 269 aa4.49□□□□□ -1.69
PTCD3-215ENST00000484203 OR4E1P0C645 316 aa4.49□□□□□ -1.69
PTCD3-215ENST00000484203 HLA-DRB4P13762 266 aa4.49□□□□□ -1.69
PTCD3-215ENST00000484203 LYZP61626 148 aa4.49□□□□□ -1.69
PTCD3-215ENST00000484203 AKR1C1Q04828 323 aa4.49□□□□□ -1.69
PTCD3-215ENST00000484203 PMS2P11Q13670 270 aa4.49□□□□□ -1.69
PTCD3-215ENST00000484203 SPANXN5Q5MJ07 72 aa4.49□□□□□ -1.69
PTCD3-215ENST00000484203 PXDC1Q5TGL8 231 aa4.49□□□□□ -1.69
PTCD3-215ENST00000484203 EBLN2Q6P2I7 272 aa4.49□□□□□ -1.69
PTCD3-215ENST00000484203 FOXI2Q6ZQN5 318 aa4.49□□□□□ -1.69
PTCD3-215ENST00000484203 TMEM144Q7Z5S9 345 aa4.49□□□□□ -1.69
PTCD3-215ENST00000484203 THAP8Q8NA92 274 aa4.49□□□□□ -1.69
PTCD3-215ENST00000484203 OR1B1Q8NGR6 318 aa4.49□□□□□ -1.69
PTCD3-215ENST00000484203 C2CD4CQ8TF44 421 aa4.49□□□□□ -1.69
PTCD3-215ENST00000484203 SMIM8Q96KF7 97 aa4.49□□□□□ -1.69
PTCD3-215ENST00000484203 TMEM147Q9BVK8 224 aa4.49□□□□□ -1.69
PTCD3-215ENST00000484203 GGACTQ9BVM4 153 aa4.49□□□□□ -1.69
PTCD3-215ENST00000484203 HLA-DRB4X5D2U9 266 aa4.49□□□□□ -1.69
PTCD3-215ENST00000484203 RYR2Q92736 4967 aa4.49□□□□□ -1.69
PTCD3-215ENST00000484203 DNAH1Q9P2D7 4330 aa4.49□□□□□ -1.69
PTCD3-215ENST00000484203 H3BMM0 161 aa4.48□□□□□ -1.69
PTCD3-215ENST00000484203 TSC22D2O75157 780 aa4.48□□□□□ -1.69
PTCD3-215ENST00000484203 LY6G6CO95867 125 aa4.48□□□□□ -1.69
PTCD3-215ENST00000484203 AMBPP02760 352 aa4.48□□□□□ -1.69
PTCD3-215ENST00000484203 IAPPP10997 89 aa4.48□□□□□ -1.69
PTCD3-215ENST00000484203 RPL7P18124 248 aaKnown RBP4.48□□□□□ -1.69
PTCD3-215ENST00000484203 B2MP61769 119 aa4.48□□□□□ -1.69
PTCD3-215ENST00000484203 DLK1P80370 383 aa4.48□□□□□ -1.69
PTCD3-215ENST00000484203 ZNF90Q03938 601 aa4.48□□□□□ -1.69
PTCD3-215ENST00000484203 RAB31Q13636 194 aa4.48□□□□□ -1.69
PTCD3-215ENST00000484203 ZNF846Q147U1 533 aa4.48□□□□□ -1.69
PTCD3-215ENST00000484203 LGALS9CQ6DKI2 356 aa4.48□□□□□ -1.69
PTCD3-215ENST00000484203 FAM24BQ8N5W8 94 aa4.48□□□□□ -1.69
PTCD3-215ENST00000484203 OR10P1Q8NGE3 313 aa4.48□□□□□ -1.69
PTCD3-215ENST00000484203 MITD1Q8WV92 249 aa4.48□□□□□ -1.69
PTCD3-215ENST00000484203 CCDC32Q9BV29 185 aa4.48□□□□□ -1.69
PTCD3-215ENST00000484203 RPRMQ9NS64 109 aa4.48□□□□□ -1.69
PTCD3-215ENST00000484203 PSENENQ9NZ42 101 aa4.48□□□□□ -1.69
PTCD3-215ENST00000484203 MGAT4CQ9UBM8 478 aa4.48□□□□□ -1.69
PTCD3-215ENST00000484203 SACSQ9NZJ4 4579 aa4.47□□□□□ -1.69
PTCD3-215ENST00000484203 IGKV1D-37A0A075B6S9 117 aa4.47□□□□□ -1.69
PTCD3-215ENST00000484203 TRAV10A0A0B4J240 114 aa4.47□□□□□ -1.69
PTCD3-215ENST00000484203 LOC102723971A0A1B0GUV8 181 aa4.47□□□□□ -1.69
PTCD3-215ENST00000484203 SMCO3A2RU48 225 aa4.47□□□□□ -1.69
PTCD3-215ENST00000484203 KNCNA6PVL3 124 aa4.47□□□□□ -1.69
PTCD3-215ENST00000484203 K7EPK0 472 aa4.47□□□□□ -1.69
PTCD3-215ENST00000484203 HYPMO75409 117 aa4.47□□□□□ -1.69
PTCD3-215ENST00000484203 DUSP14O95147 198 aaKnown RBP4.47□□□□□ -1.69
PTCD3-215ENST00000484203 IL5P05113 134 aa4.47□□□□□ -1.69
PTCD3-215ENST00000484203 GIG44P09565 113 aaPredicted RBP4.47□□□□□ -1.69
PTCD3-215ENST00000484203 IL7P13232 177 aa4.47□□□□□ -1.69
PTCD3-215ENST00000484203 PVALBP20472 110 aaPredicted RBP4.47□□□□□ -1.69
PTCD3-215ENST00000484203 PAX9P55771 341 aa4.47□□□□□ -1.69
PTCD3-215ENST00000484203 BAK1Q16611 211 aa4.47□□□□□ -1.69
PTCD3-215ENST00000484203 IAH1Q2TAA2 248 aaPredicted RBP4.47□□□□□ -1.69
PTCD3-215ENST00000484203 ACOT7LQ6ZUV0 252 aa4.47□□□□□ -1.69
PTCD3-215ENST00000484203 Q8NAQ8 132 aa4.47□□□□□ -1.69
PTCD3-215ENST00000484203 FAM210BQ96KR6 192 aa4.47□□□□□ -1.69
PTCD3-215ENST00000484203 LINC00052Q96N35 136 aa4.47□□□□□ -1.69
PTCD3-215ENST00000484203 MAGT1Q9H0U3 335 aa4.47□□□□□ -1.69
PTCD3-215ENST00000484203 SAV1Q9H4B6 383 aaPredicted RBP4.47□□□□□ -1.69
PTCD3-215ENST00000484203 NPVFQ9HCQ7 196 aa4.47□□□□□ -1.69
PTCD3-215ENST00000484203 CLEC5AQ9NY25 188 aa4.47□□□□□ -1.69
PTCD3-215ENST00000484203 GOLT1BQ9Y3E0 138 aa4.47□□□□□ -1.69
PTCD3-215ENST00000484203 STARD9Q9P2P6 4700 aa4.47□□□□□ -1.69
PTCD3-215ENST00000484203 LYSTQ99698 3801 aa4.46□□□□□ -1.69
PTCD3-215ENST00000484203 IGHV4-28A0A0C4DH34 117 aa4.46□□□□□ -1.7
PTCD3-215ENST00000484203 ZNF98A6NK75 572 aa4.46□□□□□ -1.7
PTCD3-215ENST00000484203 PRSS46E5RG02 174 aa4.46□□□□□ -1.7
PTCD3-215ENST00000484203 L7N2F9 121 aa4.46□□□□□ -1.7
PTCD3-215ENST00000484203 LYRM1O43325 122 aa4.46□□□□□ -1.7
PTCD3-215ENST00000484203 SSSCA1O60232 199 aa4.46□□□□□ -1.7
PTCD3-215ENST00000484203 DEDDO75618 318 aa4.46□□□□□ -1.7
PTCD3-215ENST00000484203 ADAP1O75689 374 aa4.46□□□□□ -1.7
PTCD3-215ENST00000484203 SPART-AS1P0CW21 52 aa4.46□□□□□ -1.7
PTCD3-215ENST00000484203 ORM2P19652 201 aa4.46□□□□□ -1.7
PTCD3-215ENST00000484203 PLP1P60201 277 aa4.46□□□□□ -1.7
PTCD3-215ENST00000484203 NANOS2P60321 138 aaKnown RBP4.46□□□□□ -1.7
PTCD3-215ENST00000484203 POLR2GP62487 172 aaKnown RBP eCLIP4.46□□□□□ -1.7
PTCD3-215ENST00000484203 VAMP2P63027 116 aa4.46□□□□□ -1.7
PTCD3-215ENST00000484203 PSG9Q00887 426 aa4.46□□□□□ -1.7
PTCD3-215ENST00000484203 OR2F1Q13607 317 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms