RNA–Protein interactions for RNA: ENST00000482791.1

SNX27-205, Transcript of sorting nexin family member 27, humanhuman

TSL 3

Gene SNX27, Length 491 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-205ENST00000482791 TOMM20LQ6UXN7 152 aa1.42□□□□□ -2.18
SNX27-205ENST00000482791 PRR15Q8IV56 129 aa1.42□□□□□ -2.18
SNX27-205ENST00000482791 LINC00311Q8N616 119 aa1.42□□□□□ -2.18
SNX27-205ENST00000482791 LINC00301Q8NCQ3 95 aa1.42□□□□□ -2.18
SNX27-205ENST00000482791 ZNF714Q96N38 554 aa1.42□□□□□ -2.18
SNX27-205ENST00000482791 C6orf62Q9GZU0 229 aaPredicted RBP1.42□□□□□ -2.18
SNX27-205ENST00000482791 LAMTOR3Q9UHA4 124 aa1.42□□□□□ -2.18
SNX27-205ENST00000482791 TRAPPC2LQ9UL33 140 aa1.42□□□□□ -2.18
SNX27-205ENST00000482791 COL11A1P12107 1806 aaPredicted RBP1.42□□□□□ -2.18
SNX27-205ENST00000482791 MED12LQ86YW9 2145 aa1.42□□□□□ -2.18
SNX27-205ENST00000482791 RTTNQ86VV8 2226 aa1.42□□□□□ -2.18
SNX27-205ENST00000482791 XIRP1Q702N8 1843 aaKnown RBP1.41□□□□□ -2.18
SNX27-205ENST00000482791 MEIKINA0A087WXM9 373 aa1.41□□□□□ -2.18
SNX27-205ENST00000482791 TRAV14DV4A0A0A6YYC5 116 aa1.41□□□□□ -2.18
SNX27-205ENST00000482791 TRBV6-5A0A0K0K1A5 114 aa1.41□□□□□ -2.18
SNX27-205ENST00000482791 A8MWV9 139 aa1.41□□□□□ -2.18
SNX27-205ENST00000482791 LYZL6O75951 148 aa1.41□□□□□ -2.18
SNX27-205ENST00000482791 CST7O76096 145 aa1.41□□□□□ -2.18
SNX27-205ENST00000482791 GPX1P07203 203 aa1.41□□□□□ -2.18
SNX27-205ENST00000482791 ZNF705BP0CI00 300 aaPredicted RBP1.41□□□□□ -2.18
SNX27-205ENST00000482791 BCL2P10415 239 aa1.41□□□□□ -2.18
SNX27-205ENST00000482791 RPS3P23396 243 aaKnown RBP eCLIP1.41□□□□□ -2.18
SNX27-205ENST00000482791 HBBP68871 147 aa1.41□□□□□ -2.18
SNX27-205ENST00000482791 ALX1Q15699 326 aa1.41□□□□□ -2.18
SNX27-205ENST00000482791 OR4K15Q8NH41 348 aa1.41□□□□□ -2.18
SNX27-205ENST00000482791 SKA2Q8WVK7 121 aaPredicted RBP1.41□□□□□ -2.18
SNX27-205ENST00000482791 RETNLBQ9BQ08 111 aa1.41□□□□□ -2.18
SNX27-205ENST00000482791 NAT8BQ9UHF3 227 aa1.41□□□□□ -2.18
SNX27-205ENST00000482791 HS3ST2Q9Y278 367 aa1.41□□□□□ -2.18
SNX27-205ENST00000482791 MED31Q9Y3C7 131 aa1.41□□□□□ -2.18
SNX27-205ENST00000482791 HSPB11Q9Y547 144 aa1.41□□□□□ -2.18
SNX27-205ENST00000482791 MYOFQ9NZM1 2061 aa1.4□□□□□ -2.19
SNX27-205ENST00000482791 FCGBPQ9Y6R7 5405 aaPredicted RBP1.4□□□□□ -2.19
SNX27-205ENST00000482791 NCAPD3P42695 1498 aa1.4□□□□□ -2.19
SNX27-205ENST00000482791 RER1O15258 196 aa1.4□□□□□ -2.19
SNX27-205ENST00000482791 HIST1H2BKO60814 126 aa1.4□□□□□ -2.19
SNX27-205ENST00000482791 PROSCO94903 275 aa1.4□□□□□ -2.19
SNX27-205ENST00000482791 HIST1H2BJP06899 126 aa1.4□□□□□ -2.19
SNX27-205ENST00000482791 ROMO1P60602 79 aa1.4□□□□□ -2.19
SNX27-205ENST00000482791 PHF5AQ7RTV0 110 aaKnown RBP1.4□□□□□ -2.19
SNX27-205ENST00000482791 C15orf53Q8NAA6 179 aa1.4□□□□□ -2.19
SNX27-205ENST00000482791 TMEM35BQ8NCS4 154 aa1.4□□□□□ -2.19
SNX27-205ENST00000482791 OR9Q1Q8NGQ5 310 aa1.4□□□□□ -2.19
SNX27-205ENST00000482791 OR2T35Q8NGX2 323 aa1.4□□□□□ -2.19
SNX27-205ENST00000482791 ISOC1Q96CN7 298 aa1.4□□□□□ -2.19
SNX27-205ENST00000482791 LINC00467Q9BRT7 94 aa1.4□□□□□ -2.19
SNX27-205ENST00000482791 OR2H1Q9GZK4 316 aa1.4□□□□□ -2.19
SNX27-205ENST00000482791 CACYBPQ9HB71 228 aaKnown RBP1.4□□□□□ -2.19
SNX27-205ENST00000482791 C14orf132Q9NPU4 83 aa1.4□□□□□ -2.19
SNX27-205ENST00000482791 BATF3Q9NR55 127 aa1.4□□□□□ -2.19
SNX27-205ENST00000482791 LAMTOR2Q9Y2Q5 125 aa1.4□□□□□ -2.19
SNX27-205ENST00000482791 PIK3C2AO00443 1686 aa1.39□□□□□ -2.19
SNX27-205ENST00000482791 CEP192Q8TEP8 1941 aa1.39□□□□□ -2.19
SNX27-205ENST00000482791 TRGV2A0A075B6R0 118 aa1.39□□□□□ -2.19
SNX27-205ENST00000482791 IGKV2D-26A0A0A0MRZ7 120 aa1.39□□□□□ -2.19
SNX27-205ENST00000482791 TRAV12-1A0A0B4J245 112 aa1.39□□□□□ -2.19
SNX27-205ENST00000482791 TRAV5A0A0B4J249 113 aa1.39□□□□□ -2.19
SNX27-205ENST00000482791 OR1I1O60431 355 aa1.39□□□□□ -2.19
SNX27-205ENST00000482791 FABP2P12104 132 aa1.39□□□□□ -2.19
SNX27-205ENST00000482791 RPL35P42766 123 aaKnown RBP1.39□□□□□ -2.19
SNX27-205ENST00000482791 EIF3IQ13347 325 aaKnown RBP1.39□□□□□ -2.19
SNX27-205ENST00000482791 PDE6HQ13956 83 aa1.39□□□□□ -2.19
SNX27-205ENST00000482791 CLECL1Q8IZS7 167 aa1.39□□□□□ -2.19
SNX27-205ENST00000482791 C12orf29Q8N999 325 aa1.39□□□□□ -2.19
SNX27-205ENST00000482791 SFT2D1Q8WV19 159 aa1.39□□□□□ -2.19
SNX27-205ENST00000482791 POP5Q969H6 163 aaKnown RBP1.39□□□□□ -2.19
SNX27-205ENST00000482791 CHCHD1Q96BP2 118 aaKnown RBP1.39□□□□□ -2.19
SNX27-205ENST00000482791 TAF9BQ9HBM6 251 aa1.39□□□□□ -2.19
SNX27-205ENST00000482791 TRPM1Q7Z4N2 1603 aa1.39□□□□□ -2.19
SNX27-205ENST00000482791 ARHGEF11O15085 1522 aa1.39□□□□□ -2.19
SNX27-205ENST00000482791 FAM107AO95990 144 aa1.38□□□□□ -2.19
SNX27-205ENST00000482791 IGLV1-51P01701 117 aa1.38□□□□□ -2.19
SNX27-205ENST00000482791 BRS3P32247 399 aa1.38□□□□□ -2.19
SNX27-205ENST00000482791 KLRD1Q13241 179 aa1.38□□□□□ -2.19
SNX27-205ENST00000482791 C10orf55Q5SWW7 151 aa1.38□□□□□ -2.19
SNX27-205ENST00000482791 C1orf134Q5TEV5 83 aa1.38□□□□□ -2.19
SNX27-205ENST00000482791 Q8N2B8 174 aa1.38□□□□□ -2.19
SNX27-205ENST00000482791 OR5D16Q8NGK9 328 aa1.38□□□□□ -2.19
SNX27-205ENST00000482791 OR5AC2Q9NZP5 309 aa1.38□□□□□ -2.19
SNX27-205ENST00000482791 LY96Q9Y6Y9 160 aa1.38□□□□□ -2.19
SNX27-205ENST00000482791 SCN3AQ9NY46 2000 aa1.38□□□□□ -2.19
SNX27-205ENST00000482791 BCL9O00512 1426 aa1.38□□□□□ -2.19
SNX27-205ENST00000482791 FRMPD1Q5SYB0 1578 aa1.38□□□□□ -2.19
SNX27-205ENST00000482791 DIDO1Q9BTC0 2240 aaKnown RBP1.38□□□□□ -2.19
SNX27-205ENST00000482791 FER1L6Q2WGJ9 1857 aa1.37□□□□□ -2.19
SNX27-205ENST00000482791 A0A087WX48 190 aa1.37□□□□□ -2.19
SNX27-205ENST00000482791 ARPC5O15511 151 aa1.37□□□□□ -2.19
SNX27-205ENST00000482791 MT-ND6P03923 174 aa1.37□□□□□ -2.19
SNX27-205ENST00000482791 IFNA4P05014 189 aa1.37□□□□□ -2.19
SNX27-205ENST00000482791 RNASE3P12724 160 aaKnown RBP1.37□□□□□ -2.19
SNX27-205ENST00000482791 SDC2P34741 201 aa1.37□□□□□ -2.19
SNX27-205ENST00000482791 TEX29Q8N6K0 151 aa1.37□□□□□ -2.19
SNX27-205ENST00000482791 Q8N814 137 aa1.37□□□□□ -2.19
SNX27-205ENST00000482791 AIF1LQ9BQI0 150 aa1.37□□□□□ -2.19
SNX27-205ENST00000482791 REG4Q9BYZ8 158 aa1.37□□□□□ -2.19
SNX27-205ENST00000482791 NIT2Q9NQR4 276 aa1.37□□□□□ -2.19
SNX27-205ENST00000482791 TRAPPC8Q9Y2L5 1435 aa1.37□□□□□ -2.19
SNX27-205ENST00000482791 PLXNA4Q9HCM2 1894 aa1.37□□□□□ -2.19
SNX27-205ENST00000482791 IGHV1-58A0A0C4DH39 117 aa1.36□□□□□ -2.19
SNX27-205ENST00000482791 ARL5CA6NH57 179 aa1.36□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms