RNA–Protein interactions for RNA: ENST00000481194.1

CCM2-214, Transcript of CCM2 scaffold protein, humanhuman

TSL 1 (best)

Gene CCM2, Length 5,304 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-214ENST00000481194 TMEM86BQ8N661 226 aa15.3■□□□□ 0.04
CCM2-214ENST00000481194 IGHV4-59P01825 116 aa15.29■□□□□ 0.04
CCM2-214ENST00000481194 PSMG4Q5JS54 123 aa15.29■□□□□ 0.04
CCM2-214ENST00000481194 PCNX1Q96RV3 2341 aa15.29■□□□□ 0.04
CCM2-214ENST00000481194 ATP6V0BQ99437 205 aa15.29■□□□□ 0.04
CCM2-214ENST00000481194 H3BRN7 92 aa15.29■□□□□ 0.04
CCM2-214ENST00000481194 OVOL3O00110 214 aa15.29■□□□□ 0.04
CCM2-214ENST00000481194 IGLV2-23P01705 113 aa15.29■□□□□ 0.04
CCM2-214ENST00000481194 TCF23Q7RTU1 214 aa15.29■□□□□ 0.04
CCM2-214ENST00000481194 USF3Q68DE3 2245 aa15.29■□□□□ 0.04
CCM2-214ENST00000481194 IGLC1P0CG04 106 aa15.29■□□□□ 0.04
CCM2-214ENST00000481194 CBY3A6NI87 242 aa15.28■□□□□ 0.04
CCM2-214ENST00000481194 ZNF138P52744 262 aa15.28■□□□□ 0.04
CCM2-214ENST00000481194 C11orf44Q8N8P7 122 aa15.28■□□□□ 0.04
CCM2-214ENST00000481194 IGFBPL1Q8WX77 278 aa15.28■□□□□ 0.04
CCM2-214ENST00000481194 C5orf30Q96GV9 206 aa15.28■□□□□ 0.04
CCM2-214ENST00000481194 LINC01587Q99440 93 aa15.28■□□□□ 0.04
CCM2-214ENST00000481194 TMEM89A2RUT3 159 aa15.28■□□□□ 0.04
CCM2-214ENST00000481194 PSG3Q16557 428 aa15.28■□□□□ 0.04
CCM2-214ENST00000481194 OCC1Q8TAD7 63 aa15.28■□□□□ 0.04
CCM2-214ENST00000481194 RFNGQ9Y644 331 aa15.28■□□□□ 0.04
CCM2-214ENST00000481194 SMIM6P0DI80 62 aa15.28■□□□□ 0.04
CCM2-214ENST00000481194 FOXE3Q13461 319 aa15.28■□□□□ 0.04
CCM2-214ENST00000481194 RNF151Q2KHN1 245 aa15.28■□□□□ 0.04
CCM2-214ENST00000481194 PRSS1P07477 247 aa15.27■□□□□ 0.04
CCM2-214ENST00000481194 GTF2H5Q6ZYL4 71 aa15.27■□□□□ 0.04
CCM2-214ENST00000481194 PACRGQ96M98 296 aaPredicted RBP15.27■□□□□ 0.04
CCM2-214ENST00000481194 IGHV7-81A0A0B4J1V7 117 aa15.27■□□□□ 0.03
CCM2-214ENST00000481194 F2Z2F3 143 aa15.27■□□□□ 0.03
CCM2-214ENST00000481194 SLC17A3O00476 420 aa15.27■□□□□ 0.03
CCM2-214ENST00000481194 NRN1Q9NPD7 142 aa15.27■□□□□ 0.03
CCM2-214ENST00000481194 ARHGAP21Q5T5U3 1957 aa15.27■□□□□ 0.03
CCM2-214ENST00000481194 ST6GALNAC6Q969X2 333 aa15.27■□□□□ 0.03
CCM2-214ENST00000481194 VPS25Q9BRG1 176 aa15.27■□□□□ 0.03
CCM2-214ENST00000481194 UTRNP46939 3433 aa15.27■□□□□ 0.03
CCM2-214ENST00000481194 C5orf56Q8N8D9 126 aa15.26■□□□□ 0.03
CCM2-214ENST00000481194 ATP5L2Q7Z4Y8 100 aa15.26■□□□□ 0.03
CCM2-214ENST00000481194 M0R143 59 aa15.26■□□□□ 0.03
CCM2-214ENST00000481194 HERVK_113P61574 105 aa15.26■□□□□ 0.03
CCM2-214ENST00000481194 LCN12Q6JVE5 192 aa15.26■□□□□ 0.03
CCM2-214ENST00000481194 EXOC3-AS1Q8N2X6 119 aa15.26■□□□□ 0.03
CCM2-214ENST00000481194 TSKUQ8WUA8 353 aa15.26■□□□□ 0.03
CCM2-214ENST00000481194 CPAMD8Q8IZJ3 1885 aa15.26■□□□□ 0.03
CCM2-214ENST00000481194 SLC25A2Q9BXI2 301 aa15.26■□□□□ 0.03
CCM2-214ENST00000481194 TNFRSF13BO14836 293 aaPredicted RBP15.25■□□□□ 0.03
CCM2-214ENST00000481194 LYRM7Q5U5X0 104 aa15.25■□□□□ 0.03
CCM2-214ENST00000481194 Q8N9W7 124 aa15.25■□□□□ 0.03
CCM2-214ENST00000481194 NBASA2RRP1 2371 aa15.25■□□□□ 0.03
CCM2-214ENST00000481194 DYSFO75923 2080 aa15.25■□□□□ 0.03
CCM2-214ENST00000481194 A0A1B0GUS0 222 aa15.25■□□□□ 0.03
CCM2-214ENST00000481194 SYNJ2BPP57105 145 aa15.25■□□□□ 0.03
CCM2-214ENST00000481194 PRR20EP86478 221 aa15.25■□□□□ 0.03
CCM2-214ENST00000481194 PRR20CP86479 221 aa15.25■□□□□ 0.03
CCM2-214ENST00000481194 PRR20DP86480 221 aa15.25■□□□□ 0.03
CCM2-214ENST00000481194 PRR20BP86481 221 aa15.25■□□□□ 0.03
CCM2-214ENST00000481194 PRR20AP86496 221 aa15.25■□□□□ 0.03
CCM2-214ENST00000481194 ZNF56Q15929 161 aa15.25■□□□□ 0.03
CCM2-214ENST00000481194 C1QL4Q86Z23 238 aa15.25■□□□□ 0.03
CCM2-214ENST00000481194 NDPQ00604 133 aa15.24■□□□□ 0.03
CCM2-214ENST00000481194 TMEM75Q8N9X5 138 aa15.24■□□□□ 0.03
CCM2-214ENST00000481194 HIGD1CA8MV81 97 aa15.24■□□□□ 0.03
CCM2-214ENST00000481194 SCGB1C2P0DMR2 95 aa15.24■□□□□ 0.03
CCM2-214ENST00000481194 SRIP30626 198 aa15.24■□□□□ 0.03
CCM2-214ENST00000481194 PET117Q6UWS5 81 aa15.24■□□□□ 0.03
CCM2-214ENST00000481194 RNASE7Q9H1E1 156 aaKnown RBP15.24■□□□□ 0.03
CCM2-214ENST00000481194 IGKV2-40A0A087WW87 121 aaPredicted RBP15.23■□□□□ 0.03
CCM2-214ENST00000481194 IGKV2D-40P01614 121 aaPredicted RBP15.23■□□□□ 0.03
CCM2-214ENST00000481194 OR4C5Q8NGB2 326 aa15.23■□□□□ 0.03
CCM2-214ENST00000481194 MRPL27Q9P0M9 148 aaKnown RBP15.23■□□□□ 0.03
CCM2-214ENST00000481194 MCRIP2Q9BUT9 160 aaKnown RBP15.23■□□□□ 0.03
CCM2-214ENST00000481194 PLA2G2AP14555 144 aa15.23■□□□□ 0.03
CCM2-214ENST00000481194 CD33P20138 364 aa15.23■□□□□ 0.03
CCM2-214ENST00000481194 BDP1A6H8Y1 2624 aa15.23■□□□□ 0.03
CCM2-214ENST00000481194 IGLV11-55A0A075B6I3 123 aa15.23■□□□□ 0.03
CCM2-214ENST00000481194 TRBV19A0A075B6N1 114 aa15.23■□□□□ 0.03
CCM2-214ENST00000481194 CRYGCP07315 174 aa15.23■□□□□ 0.03
CCM2-214ENST00000481194 AMBPP02760 352 aa15.22■□□□□ 0.03
CCM2-214ENST00000481194 MDKP21741 143 aaPredicted RBP15.22■□□□□ 0.03
CCM2-214ENST00000481194 LSM4Q9Y4Z0 139 aaKnown RBP15.22■□□□□ 0.03
CCM2-214ENST00000481194 RASL11AQ6T310 242 aa15.22■□□□□ 0.03
CCM2-214ENST00000481194 IL17RELQ6ZVW7 336 aa15.22■□□□□ 0.03
CCM2-214ENST00000481194 LINC01551Q86U37 167 aa15.22■□□□□ 0.03
CCM2-214ENST00000481194 LOC389332A0A1B0GUA5 103 aa15.22■□□□□ 0.03
CCM2-214ENST00000481194 PRDM13Q9H4Q3 707 aa15.22■□□□□ 0.03
CCM2-214ENST00000481194 OR11H12B2RN74 326 aa15.22■□□□□ 0.03
CCM2-214ENST00000481194 LGALS1P09382 135 aaKnown RBP15.22■□□□□ 0.03
CCM2-214ENST00000481194 Q6ZPA2 131 aa15.22■□□□□ 0.03
CCM2-214ENST00000481194 NEU1Q99519 415 aa15.22■□□□□ 0.03
CCM2-214ENST00000481194 KIR2DL4Q99706 377 aa15.22■□□□□ 0.03
CCM2-214ENST00000481194 C1QTNF4Q9BXJ3 329 aa15.21■□□□□ 0.03
CCM2-214ENST00000481194 MEGF9Q9H1U4 602 aa15.21■□□□□ 0.03
CCM2-214ENST00000481194 PRO1933Q9H354 126 aa15.21■□□□□ 0.03
CCM2-214ENST00000481194 TSSC4Q9Y5U2 329 aaPredicted RBP15.21■□□□□ 0.03
CCM2-214ENST00000481194 PIEZO1Q92508 2521 aa15.21■□□□□ 0.03
CCM2-214ENST00000481194 MALRD1Q5VYJ5 2156 aa15.21■□□□□ 0.03
CCM2-214ENST00000481194 CBY1Q9Y3M2 126 aa15.21■□□□□ 0.03
CCM2-214ENST00000481194 I3L2K1 104 aa15.21■□□□□ 0.02
CCM2-214ENST00000481194 M0R381 172 aa15.21■□□□□ 0.02
CCM2-214ENST00000481194 CD7P09564 240 aa15.21■□□□□ 0.02
CCM2-214ENST00000481194 CYYR1Q96J86 154 aa15.21■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms