RNA–Protein interactions for RNA: ENST00000479510.2

SYNGAP1-206, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 2

Gene SYNGAP1, Length 2,073 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-206ENST00000479510 OR5AL1P0C617 328 aa19.47■□□□□ 0.71
SYNGAP1-206ENST00000479510 LCN12Q6JVE5 192 aa19.47■□□□□ 0.71
SYNGAP1-206ENST00000479510 PRNTQ86SH4 94 aa19.47■□□□□ 0.71
SYNGAP1-206ENST00000479510 EXOC3-AS1Q8N2X6 119 aa19.47■□□□□ 0.71
SYNGAP1-206ENST00000479510 GATD1Q8NB37 220 aa19.47■□□□□ 0.71
SYNGAP1-206ENST00000479510 ZNF48Q96MX3 618 aaPredicted RBP19.47■□□□□ 0.71
SYNGAP1-206ENST00000479510 LAMTOR2Q9Y2Q5 125 aa19.47■□□□□ 0.71
SYNGAP1-206ENST00000479510 A6NNC1 897 aa19.46■□□□□ 0.71
SYNGAP1-206ENST00000479510 PRB3Q04118 309 aaPredicted RBP19.46■□□□□ 0.71
SYNGAP1-206ENST00000479510 BATFQ16520 125 aa19.46■□□□□ 0.71
SYNGAP1-206ENST00000479510 FAM120AOSQ5T036 256 aa19.46■□□□□ 0.71
SYNGAP1-206ENST00000479510 CIARTQ8N365 385 aaPredicted RBP19.46■□□□□ 0.71
SYNGAP1-206ENST00000479510 LINC01560Q8TB33 94 aa19.46■□□□□ 0.71
SYNGAP1-206ENST00000479510 CFHR4Q92496 578 aa19.46■□□□□ 0.71
SYNGAP1-206ENST00000479510 TRAV8-1A0A0A6YYK1 113 aa19.45■□□□□ 0.7
SYNGAP1-206ENST00000479510 WI2-2373I1.2A0A1W2PRP0 233 aa19.45■□□□□ 0.7
SYNGAP1-206ENST00000479510 M0R1W7 72 aa19.45■□□□□ 0.7
SYNGAP1-206ENST00000479510 Q56UQ5 140 aa19.45■□□□□ 0.7
SYNGAP1-206ENST00000479510 SIGLEC15Q6ZMC9 328 aa19.45■□□□□ 0.7
SYNGAP1-206ENST00000479510 ZNF491Q8N8L2 437 aa19.45■□□□□ 0.7
SYNGAP1-206ENST00000479510 RNF125Q96EQ8 232 aa19.45■□□□□ 0.7
SYNGAP1-206ENST00000479510 GOLT1BQ9Y3E0 138 aa19.45■□□□□ 0.7
SYNGAP1-206ENST00000479510 BOD1L1Q8NFC6 3051 aa19.45■□□□□ 0.7
SYNGAP1-206ENST00000479510 ASPMQ8IZT6 3477 aa19.45■□□□□ 0.7
SYNGAP1-206ENST00000479510 HLA-DRB1P01911 266 aa19.45■□□□□ 0.7
SYNGAP1-206ENST00000479510 PDE6HQ13956 83 aa19.45■□□□□ 0.7
SYNGAP1-206ENST00000479510 Q6AWC8 147 aa19.45■□□□□ 0.7
SYNGAP1-206ENST00000479510 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP19.44■□□□□ 0.7
SYNGAP1-206ENST00000479510 LINC00614P0C842 121 aa19.44■□□□□ 0.7
SYNGAP1-206ENST00000479510 A0A1B0GUT8 65 aa19.44■□□□□ 0.7
SYNGAP1-206ENST00000479510 MRPS12O15235 138 aaKnown RBP19.44■□□□□ 0.7
SYNGAP1-206ENST00000479510 TSPOP30536 169 aa19.44■□□□□ 0.7
SYNGAP1-206ENST00000479510 RIGQ13278 110 aa19.44■□□□□ 0.7
SYNGAP1-206ENST00000479510 LDLRAD2Q5SZI1 272 aa19.44■□□□□ 0.7
SYNGAP1-206ENST00000479510 TIMD4Q96H15 378 aa19.44■□□□□ 0.7
SYNGAP1-206ENST00000479510 PSG3Q16557 428 aa19.43■□□□□ 0.7
SYNGAP1-206ENST00000479510 IGHV1-24A0A0C4DH33 117 aa19.42■□□□□ 0.7
SYNGAP1-206ENST00000479510 SERTM2A0A1B0GWG4 89 aa19.42■□□□□ 0.7
SYNGAP1-206ENST00000479510 NPIPB5A8MRT5 1133 aa19.42■□□□□ 0.7
SYNGAP1-206ENST00000479510 OVOL3O00110 214 aa19.42■□□□□ 0.7
SYNGAP1-206ENST00000479510 ATOH7Q8N100 152 aa19.42■□□□□ 0.7
SYNGAP1-206ENST00000479510 PSG8Q9UQ74 426 aa19.42■□□□□ 0.7
SYNGAP1-206ENST00000479510 DMXL1Q9Y485 3027 aa19.42■□□□□ 0.7
SYNGAP1-206ENST00000479510 ACACAQ13085 2346 aa19.42■□□□□ 0.7
SYNGAP1-206ENST00000479510 ODF3BA8MYP8 253 aa19.42■□□□□ 0.7
SYNGAP1-206ENST00000479510 SIAH2O43255 324 aa19.42■□□□□ 0.7
SYNGAP1-206ENST00000479510 ZC2HC1AQ96GY0 325 aa19.42■□□□□ 0.7
SYNGAP1-206ENST00000479510 ANKRD11Q6UB99 2663 aaPredicted RBP19.41■□□□□ 0.7
SYNGAP1-206ENST00000479510 ZNF785A8K8V0 405 aa19.41■□□□□ 0.7
SYNGAP1-206ENST00000479510 ARL6IP6Q8N6S5 226 aa19.41■□□□□ 0.7
SYNGAP1-206ENST00000479510 ZNF414Q96IQ9 312 aa19.41■□□□□ 0.7
SYNGAP1-206ENST00000479510 PCNX1Q96RV3 2341 aa19.41■□□□□ 0.7
SYNGAP1-206ENST00000479510 SH2D7A6NKC9 451 aaPredicted RBP19.4■□□□□ 0.7
SYNGAP1-206ENST00000479510 LEPROTL1O95214 131 aa19.4■□□□□ 0.7
SYNGAP1-206ENST00000479510 IL4P05112 153 aa19.4■□□□□ 0.7
SYNGAP1-206ENST00000479510 C5orf64Q2M2E5 130 aa19.4■□□□□ 0.7
SYNGAP1-206ENST00000479510 ST20Q9HBF5 79 aa19.4■□□□□ 0.7
SYNGAP1-206ENST00000479510 MAP1BP46821 2468 aaKnown RBP19.4■□□□□ 0.7
SYNGAP1-206ENST00000479510 RIF1Q5UIP0 2472 aaKnown RBP19.4■□□□□ 0.7
SYNGAP1-206ENST00000479510 MUC6Q6W4X9 2439 aa19.4■□□□□ 0.7
SYNGAP1-206ENST00000479510 MGAQ8IWI9 3026 aa19.4■□□□□ 0.7
SYNGAP1-206ENST00000479510 SYS1-DBNDD2H3BUS1 97 aa19.4■□□□□ 0.7
SYNGAP1-206ENST00000479510 PRTN3P24158 256 aa19.4■□□□□ 0.7
SYNGAP1-206ENST00000479510 CLEC5AQ9NY25 188 aa19.4■□□□□ 0.7
SYNGAP1-206ENST00000479510 IGLL1P15814 213 aa19.39■□□□□ 0.69
SYNGAP1-206ENST00000479510 MFAP4P55083 255 aa19.39■□□□□ 0.69
SYNGAP1-206ENST00000479510 COL25A1Q9BXS0 654 aaPredicted RBP19.39■□□□□ 0.69
SYNGAP1-206ENST00000479510 IGLV11-55A0A075B6I3 123 aa19.39■□□□□ 0.69
SYNGAP1-206ENST00000479510 FAM90A27PA6NNH2 459 aa19.39■□□□□ 0.69
SYNGAP1-206ENST00000479510 MAJINQ3KP22 176 aa19.39■□□□□ 0.69
SYNGAP1-206ENST00000479510 KIR3DL3Q8N743 410 aa19.39■□□□□ 0.69
SYNGAP1-206ENST00000479510 OOSP1A8MZH6 123 aa19.38■□□□□ 0.69
SYNGAP1-206ENST00000479510 GNG7O60262 68 aa19.38■□□□□ 0.69
SYNGAP1-206ENST00000479510 C1orf122Q6ZSJ8 110 aa19.38■□□□□ 0.69
SYNGAP1-206ENST00000479510 IGFBPL1Q8WX77 278 aa19.38■□□□□ 0.69
SYNGAP1-206ENST00000479510 AKAP13Q12802 2813 aa19.38■□□□□ 0.69
SYNGAP1-206ENST00000479510 ZFHX2Q9C0A1 2572 aaPredicted RBP19.37■□□□□ 0.69
SYNGAP1-206ENST00000479510 FBLL1A6NHQ2 334 aaKnown RBP19.37■□□□□ 0.69
SYNGAP1-206ENST00000479510 ARF6P62330 175 aa19.37■□□□□ 0.69
SYNGAP1-206ENST00000479510 CCDC144NLQ6NUI1 221 aa19.37■□□□□ 0.69
SYNGAP1-206ENST00000479510 PET117Q6UWS5 81 aa19.37■□□□□ 0.69
SYNGAP1-206ENST00000479510 ZNF562Q6V9R5 426 aa19.37■□□□□ 0.69
SYNGAP1-206ENST00000479510 STPG4Q8N801 248 aa19.37■□□□□ 0.69
SYNGAP1-206ENST00000479510 C17orf77Q96MU5 243 aa19.37■□□□□ 0.69
SYNGAP1-206ENST00000479510 AAMDCQ9H7C9 122 aa19.37■□□□□ 0.69
SYNGAP1-206ENST00000479510 HSPB8Q9UJY1 196 aa19.37■□□□□ 0.69
SYNGAP1-206ENST00000479510 OR4C46A6NHA9 309 aa19.37■□□□□ 0.69
SYNGAP1-206ENST00000479510 FCGR2BP31994 310 aaPredicted RBP19.37■□□□□ 0.69
SYNGAP1-206ENST00000479510 NEU4Q8WWR8 484 aaPredicted RBP19.37■□□□□ 0.69
SYNGAP1-206ENST00000479510 LOC105371242A0A075B767 164 aa19.36■□□□□ 0.69
SYNGAP1-206ENST00000479510 SPATA12Q7Z6I5 190 aa19.36■□□□□ 0.69
SYNGAP1-206ENST00000479510 TTC9CQ8N5M4 171 aa19.36■□□□□ 0.69
SYNGAP1-206ENST00000479510 TMEM191AQ9H0A3 160 aa19.36■□□□□ 0.69
SYNGAP1-206ENST00000479510 HILPDAQ9Y5L2 63 aa19.36■□□□□ 0.69
SYNGAP1-206ENST00000479510 PSG9Q00887 426 aa19.36■□□□□ 0.69
SYNGAP1-206ENST00000479510 FOXC1Q12948 553 aa19.36■□□□□ 0.69
SYNGAP1-206ENST00000479510 FANCD2OSQ96PS1 177 aa19.36■□□□□ 0.69
SYNGAP1-206ENST00000479510 POLEQ07864 2286 aa19.35■□□□□ 0.69
SYNGAP1-206ENST00000479510 SCGB2A1O75556 95 aa19.35■□□□□ 0.69
SYNGAP1-206ENST00000479510 TOX4O94842 621 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms