RNA–Protein interactions for RNA: ENST00000478938.1

SDF4-206, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,591 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-206ENST00000478938 FAM90A1Q86YD7 464 aa16.99■□□□□ 0.31
SDF4-206ENST00000478938 SMRP1Q8NCR6 262 aa16.99■□□□□ 0.31
SDF4-206ENST00000478938 RNASE2P10153 161 aaKnown RBP16.99■□□□□ 0.31
SDF4-206ENST00000478938 PRB4P10163 310 aaPredicted RBP16.99■□□□□ 0.31
SDF4-206ENST00000478938 Q6AWC8 147 aa16.99■□□□□ 0.31
SDF4-206ENST00000478938 ZNF562Q6V9R5 426 aa16.99■□□□□ 0.31
SDF4-206ENST00000478938 GTSCR1Q86UQ5 136 aa16.99■□□□□ 0.31
SDF4-206ENST00000478938 HHLA3Q9XRX5 114 aa16.98■□□□□ 0.31
SDF4-206ENST00000478938 LTBRP36941 435 aa16.98■□□□□ 0.31
SDF4-206ENST00000478938 RBP4P02753 201 aa16.97■□□□□ 0.31
SDF4-206ENST00000478938 TCRAP04437 139 aa16.97■□□□□ 0.31
SDF4-206ENST00000478938 NHLRC4P0CG21 123 aaPredicted RBP16.97■□□□□ 0.31
SDF4-206ENST00000478938 C2orf83Q53S99 150 aa16.97■□□□□ 0.31
SDF4-206ENST00000478938 RPS19BP1Q86WX3 136 aaKnown RBP16.97■□□□□ 0.31
SDF4-206ENST00000478938 PTH2Q96A98 100 aa16.97■□□□□ 0.31
SDF4-206ENST00000478938 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP16.97■□□□□ 0.31
SDF4-206ENST00000478938 A0A1B0GW15 77 aa16.97■□□□□ 0.31
SDF4-206ENST00000478938 DLL1O00548 723 aa16.97■□□□□ 0.31
SDF4-206ENST00000478938 KIR2DS2P43631 304 aa16.97■□□□□ 0.31
SDF4-206ENST00000478938 Q86TA4 180 aa16.97■□□□□ 0.31
SDF4-206ENST00000478938 OR1L4Q8NGR5 311 aa16.97■□□□□ 0.31
SDF4-206ENST00000478938 SVILO95425 2214 aa16.97■□□□□ 0.31
SDF4-206ENST00000478938 PAX8Q06710 450 aa16.96■□□□□ 0.31
SDF4-206ENST00000478938 FCER1GP30273 86 aa16.96■□□□□ 0.31
SDF4-206ENST00000478938 CFAP126Q5VTH2 177 aa16.96■□□□□ 0.31
SDF4-206ENST00000478938 PRNTQ86SH4 94 aa16.96■□□□□ 0.31
SDF4-206ENST00000478938 A0A1W2PR77 199 aa16.95■□□□□ 0.3
SDF4-206ENST00000478938 LINC01548A6NM66 108 aa16.95■□□□□ 0.3
SDF4-206ENST00000478938 Q6ZS52 159 aa16.95■□□□□ 0.3
SDF4-206ENST00000478938 HIF1ANQ9NWT6 349 aa16.95■□□□□ 0.3
SDF4-206ENST00000478938 ZFAND6Q6FIF0 208 aa16.95■□□□□ 0.3
SDF4-206ENST00000478938 ATP6V0E2Q8NHE4 81 aa16.95■□□□□ 0.3
SDF4-206ENST00000478938 FAM173AQ9BQD7 235 aa16.95■□□□□ 0.3
SDF4-206ENST00000478938 ORM2P19652 201 aa16.94■□□□□ 0.3
SDF4-206ENST00000478938 C11orf53Q8IXP5 236 aa16.94■□□□□ 0.3
SDF4-206ENST00000478938 AMN1Q8IY45 258 aa16.94■□□□□ 0.3
SDF4-206ENST00000478938 NPIPB3Q92617 1050 aa16.94■□□□□ 0.3
SDF4-206ENST00000478938 ZNF785A8K8V0 405 aa16.94■□□□□ 0.3
SDF4-206ENST00000478938 CD27P26842 260 aa16.94■□□□□ 0.3
SDF4-206ENST00000478938 MAPKAPK5-AS1Q8N8E1 139 aa16.94■□□□□ 0.3
SDF4-206ENST00000478938 PIFOQ8TCI5 191 aa16.94■□□□□ 0.3
SDF4-206ENST00000478938 OBP2BQ9NPH6 170 aa16.94■□□□□ 0.3
SDF4-206ENST00000478938 IGHV1-45A0A0A0MS14 117 aa16.93■□□□□ 0.3
SDF4-206ENST00000478938 SMKR1H3BMG3 65 aa16.93■□□□□ 0.3
SDF4-206ENST00000478938 CLEC3BP05452 202 aa16.93■□□□□ 0.3
SDF4-206ENST00000478938 ODF1Q14990 250 aa16.93■□□□□ 0.3
SDF4-206ENST00000478938 MDP1Q86V88 176 aa16.93■□□□□ 0.3
SDF4-206ENST00000478938 CARD19Q96LW7 228 aa16.93■□□□□ 0.3
SDF4-206ENST00000478938 Q9H3A6 140 aa16.93■□□□□ 0.3
SDF4-206ENST00000478938 SAA2P0DJI9 122 aaPredicted RBP16.93■□□□□ 0.3
SDF4-206ENST00000478938 ABHD17BQ5VST6 288 aa16.93■□□□□ 0.3
SDF4-206ENST00000478938 MBNL2Q5VZF2 373 aaKnown RBP16.93■□□□□ 0.3
SDF4-206ENST00000478938 GATD1Q8NB37 220 aa16.93■□□□□ 0.3
SDF4-206ENST00000478938 TMEM213A2RRL7 107 aa16.92■□□□□ 0.3
SDF4-206ENST00000478938 LOXL3P58215 753 aa16.92■□□□□ 0.3
SDF4-206ENST00000478938 CD177Q8N6Q3 437 aa16.92■□□□□ 0.3
SDF4-206ENST00000478938 RBMXL3Q8N7X1 1067 aaKnown RBP16.92■□□□□ 0.3
SDF4-206ENST00000478938 CCDC179H3BU77 68 aa16.92■□□□□ 0.3
SDF4-206ENST00000478938 DIAPH2-AS1Q14236 149 aa16.92■□□□□ 0.3
SDF4-206ENST00000478938 NAV3Q8IVL0 2385 aa16.92■□□□□ 0.3
SDF4-206ENST00000478938 TEX29Q8N6K0 151 aa16.92■□□□□ 0.3
SDF4-206ENST00000478938 OR1L8Q8NGR8 309 aa16.92■□□□□ 0.3
SDF4-206ENST00000478938 MRPL36Q9P0J6 103 aaKnown RBP16.92■□□□□ 0.3
SDF4-206ENST00000478938 IGKV1D-37A0A075B6S9 117 aa16.91■□□□□ 0.3
SDF4-206ENST00000478938 IGKV3D-15A0A087WSY6 115 aa16.91■□□□□ 0.3
SDF4-206ENST00000478938 SFTA2Q6UW10 78 aa16.91■□□□□ 0.3
SDF4-206ENST00000478938 RND1Q92730 232 aa16.91■□□□□ 0.3
SDF4-206ENST00000478938 HIST1H4GQ99525 98 aa16.91■□□□□ 0.3
SDF4-206ENST00000478938 UPK2O00526 184 aa16.91■□□□□ 0.3
SDF4-206ENST00000478938 ZC2HC1BQ5TFG8 222 aa16.91■□□□□ 0.3
SDF4-206ENST00000478938 ORMDL3Q8N138 153 aa16.91■□□□□ 0.3
SDF4-206ENST00000478938 PRR7Q8TB68 274 aa16.91■□□□□ 0.3
SDF4-206ENST00000478938 IMMP1LQ96LU5 166 aa16.91■□□□□ 0.3
SDF4-206ENST00000478938 TNFRSF18Q9Y5U5 241 aa16.91■□□□□ 0.3
SDF4-206ENST00000478938 IGLV3-19P01714 112 aa16.9■□□□□ 0.3
SDF4-206ENST00000478938 COX6A1P12074 109 aa16.9■□□□□ 0.3
SDF4-206ENST00000478938 SRSF1Q07955 248 aaKnown RBP eCLIP16.9■□□□□ 0.3
SDF4-206ENST00000478938 KLF17Q5JT82 389 aaPredicted RBP16.9■□□□□ 0.3
SDF4-206ENST00000478938 GOLT1AQ6ZVE7 132 aa16.9■□□□□ 0.3
SDF4-206ENST00000478938 KIR2DL4Q99706 377 aa16.9■□□□□ 0.3
SDF4-206ENST00000478938 ARFGEF3Q5TH69 2177 aa16.9■□□□□ 0.3
SDF4-206ENST00000478938 IGKCP01834 107 aa16.9■□□□□ 0.3
SDF4-206ENST00000478938 MORN3Q6PF18 240 aaPredicted RBP16.9■□□□□ 0.3
SDF4-206ENST00000478938 RITA1Q96K30 269 aa16.9■□□□□ 0.3
SDF4-206ENST00000478938 ZMAT4Q9H898 229 aa16.9■□□□□ 0.3
SDF4-206ENST00000478938 PCNX2A6NKB5 2137 aa16.9■□□□□ 0.3
SDF4-206ENST00000478938 NPYP01303 97 aa16.89■□□□□ 0.3
SDF4-206ENST00000478938 IGKV1-16P04430 117 aa16.89■□□□□ 0.3
SDF4-206ENST00000478938 OR10X1Q8NGY0 326 aa16.89■□□□□ 0.3
SDF4-206ENST00000478938 U3KQK5 164 aa16.89■□□□□ 0.3
SDF4-206ENST00000478938 PINLYPA6NC86 204 aa16.89■□□□□ 0.29
SDF4-206ENST00000478938 VSTM5A8MXK1 200 aa16.89■□□□□ 0.29
SDF4-206ENST00000478938 MRPL14Q6P1L8 145 aaKnown RBP16.89■□□□□ 0.29
SDF4-206ENST00000478938 MOGAT3Q86VF5 341 aa16.89■□□□□ 0.29
SDF4-206ENST00000478938 TRBV20-1A0A075B6N2 111 aa16.88■□□□□ 0.29
SDF4-206ENST00000478938 EPOPA6NHQ4 379 aa16.88■□□□□ 0.29
SDF4-206ENST00000478938 IGLV2-11P01706 119 aa16.88■□□□□ 0.29
SDF4-206ENST00000478938 PRSS1P07477 247 aa16.88■□□□□ 0.29
SDF4-206ENST00000478938 MRPL51Q4U2R6 128 aaKnown RBP16.88■□□□□ 0.29
SDF4-206ENST00000478938 MPV17P39210 176 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms