RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 VPREB3Q9UKI3 123 aa2.33□□□□□ -2.04
CDC42BPA-212ENST00000478573 RBMX2Q9Y388 322 aaKnown RBP2.33□□□□□ -2.04
CDC42BPA-212ENST00000478573 ALG5Q9Y673 324 aa2.33□□□□□ -2.04
CDC42BPA-212ENST00000478573 LINC00312Q9Y6C7 94 aa2.33□□□□□ -2.04
CDC42BPA-212ENST00000478573 TRRAPQ9Y4A5 3859 aa2.33□□□□□ -2.04
CDC42BPA-212ENST00000478573 DNAH3Q8TD57 4116 aa2.32□□□□□ -2.04
CDC42BPA-212ENST00000478573 IGKV1-27A0A075B6S5 117 aa2.32□□□□□ -2.04
CDC42BPA-212ENST00000478573 A0A0A6YYH2 397 aa2.32□□□□□ -2.04
CDC42BPA-212ENST00000478573 A0A0D9SG52 128 aa2.32□□□□□ -2.04
CDC42BPA-212ENST00000478573 MDFIC2A0A1B0GVS7 189 aa2.32□□□□□ -2.04
CDC42BPA-212ENST00000478573 DAPL1A0PJW8 107 aa2.32□□□□□ -2.04
CDC42BPA-212ENST00000478573 RAB19A4D1S5 217 aa2.32□□□□□ -2.04
CDC42BPA-212ENST00000478573 A6NJ64 397 aa2.32□□□□□ -2.04
CDC42BPA-212ENST00000478573 RFPL4AA6NLU0 287 aa2.32□□□□□ -2.04
CDC42BPA-212ENST00000478573 C17orf98A8MV24 154 aa2.32□□□□□ -2.04
CDC42BPA-212ENST00000478573 ODF3BA8MYP8 253 aa2.32□□□□□ -2.04
CDC42BPA-212ENST00000478573 RFPL4AL1F8VTS6 287 aa2.32□□□□□ -2.04
CDC42BPA-212ENST00000478573 RNASEK-C17orf49H0YIS7 233 aa2.32□□□□□ -2.04
CDC42BPA-212ENST00000478573 GABARAPH6UMI1 98 aa2.32□□□□□ -2.04
CDC42BPA-212ENST00000478573 SULT1C2O00338 296 aa2.32□□□□□ -2.04
CDC42BPA-212ENST00000478573 TOR1AO14656 332 aa2.32□□□□□ -2.04
CDC42BPA-212ENST00000478573 PDCD5O14737 125 aa2.32□□□□□ -2.04
CDC42BPA-212ENST00000478573 NPFFO15130 113 aa2.32□□□□□ -2.04
CDC42BPA-212ENST00000478573 FABP7O15540 132 aa2.32□□□□□ -2.04
CDC42BPA-212ENST00000478573 SYNGR1O43759 233 aa2.32□□□□□ -2.04
CDC42BPA-212ENST00000478573 ZNF737O75373 536 aa2.32□□□□□ -2.04
CDC42BPA-212ENST00000478573 RPP14O95059 124 aaKnown RBP2.32□□□□□ -2.04
CDC42BPA-212ENST00000478573 HAND1O96004 215 aa2.32□□□□□ -2.04
CDC42BPA-212ENST00000478573 MBP02144 154 aa2.32□□□□□ -2.04
CDC42BPA-212ENST00000478573 TCRBP04435 133 aa2.32□□□□□ -2.04
CDC42BPA-212ENST00000478573 CRYBA1P05813 215 aa2.32□□□□□ -2.04
CDC42BPA-212ENST00000478573 CD2P06729 351 aa2.32□□□□□ -2.04
CDC42BPA-212ENST00000478573 LIMS3P0CW19 117 aa2.32□□□□□ -2.04
CDC42BPA-212ENST00000478573 LIMS4P0CW20 117 aa2.32□□□□□ -2.04
CDC42BPA-212ENST00000478573 HLA-GP17693 338 aa2.32□□□□□ -2.04
CDC42BPA-212ENST00000478573 PAX6P26367 422 aa2.32□□□□□ -2.04
CDC42BPA-212ENST00000478573 CD34P28906 385 aa2.32□□□□□ -2.04
CDC42BPA-212ENST00000478573 FAUP35544 74 aaKnown RBP2.32□□□□□ -2.04
CDC42BPA-212ENST00000478573 GABRA2P47869 451 aa2.32□□□□□ -2.04
CDC42BPA-212ENST00000478573 DYNLT3P51808 116 aa2.32□□□□□ -2.04
CDC42BPA-212ENST00000478573 NKX2-5P52952 324 aaPredicted RBP2.32□□□□□ -2.04
CDC42BPA-212ENST00000478573 HCCSP53701 268 aa2.32□□□□□ -2.04
CDC42BPA-212ENST00000478573 DLX6P56179 175 aa2.32□□□□□ -2.04
CDC42BPA-212ENST00000478573 TAS2R31P59538 309 aa2.32□□□□□ -2.04
CDC42BPA-212ENST00000478573 B2MP61769 119 aa2.32□□□□□ -2.04
CDC42BPA-212ENST00000478573 ARF6P62330 175 aa2.32□□□□□ -2.04
CDC42BPA-212ENST00000478573 RPL31P62899 125 aaKnown RBP2.32□□□□□ -2.04
CDC42BPA-212ENST00000478573 KLRD1Q13241 179 aa2.32□□□□□ -2.04
CDC42BPA-212ENST00000478573 GPR176Q14439 515 aa2.32□□□□□ -2.04
CDC42BPA-212ENST00000478573 ZNF345Q14585 488 aa2.32□□□□□ -2.04
CDC42BPA-212ENST00000478573 LRRC75BQ2VPJ9 315 aa2.32□□□□□ -2.04
CDC42BPA-212ENST00000478573 Q3ZCU0 254 aa2.32□□□□□ -2.04
CDC42BPA-212ENST00000478573 Q5BKY6 102 aa2.32□□□□□ -2.04
CDC42BPA-212ENST00000478573 MINOS1Q5TGZ0 78 aa2.32□□□□□ -2.04
CDC42BPA-212ENST00000478573 HCP5Q6MZN7 132 aa2.32□□□□□ -2.04
CDC42BPA-212ENST00000478573 RPL22L1Q6P5R6 122 aaKnown RBP2.32□□□□□ -2.04
CDC42BPA-212ENST00000478573 BRD3OSQ6XYD6 125 aa2.32□□□□□ -2.04
CDC42BPA-212ENST00000478573 TCF23Q7RTU1 214 aa2.32□□□□□ -2.04
CDC42BPA-212ENST00000478573 SNX29P2Q8IUI4 249 aa2.32□□□□□ -2.04
CDC42BPA-212ENST00000478573 FAM58AQ8N1B3 248 aa2.32□□□□□ -2.04
CDC42BPA-212ENST00000478573 ZNF676Q8N7Q3 588 aa2.32□□□□□ -2.04
CDC42BPA-212ENST00000478573 C3orf56Q8N813 242 aa2.32□□□□□ -2.04
CDC42BPA-212ENST00000478573 OR4M1Q8NGD0 313 aa2.32□□□□□ -2.04
CDC42BPA-212ENST00000478573 OR51A2Q8NGJ7 313 aa2.32□□□□□ -2.04
CDC42BPA-212ENST00000478573 OR5AK2Q8NH90 309 aa2.32□□□□□ -2.04
CDC42BPA-212ENST00000478573 RXFP4Q8TDU9 374 aa2.32□□□□□ -2.04
CDC42BPA-212ENST00000478573 BAALCQ8WXS3 180 aa2.32□□□□□ -2.04
CDC42BPA-212ENST00000478573 RBPMSQ93062 196 aaKnown RBP2.32□□□□□ -2.04
CDC42BPA-212ENST00000478573 SMIM19Q96E16 107 aa2.32□□□□□ -2.04
CDC42BPA-212ENST00000478573 ADAT3Q96EY9 351 aaPredicted RBP2.32□□□□□ -2.04
CDC42BPA-212ENST00000478573 KCNS1Q96KK3 526 aa2.32□□□□□ -2.04
CDC42BPA-212ENST00000478573 UBE2E2Q96LR5 201 aa2.32□□□□□ -2.04
CDC42BPA-212ENST00000478573 ZNF714Q96N38 554 aa2.32□□□□□ -2.04
CDC42BPA-212ENST00000478573 RNF5Q99942 180 aa2.32□□□□□ -2.04
CDC42BPA-212ENST00000478573 ZNF649Q9BS31 505 aa2.32□□□□□ -2.04
CDC42BPA-212ENST00000478573 ABCG5Q9H222 651 aa2.32□□□□□ -2.04
CDC42BPA-212ENST00000478573 C16orf95Q9H693 158 aa2.32□□□□□ -2.04
CDC42BPA-212ENST00000478573 CYTL1Q9NRR1 136 aa2.32□□□□□ -2.04
CDC42BPA-212ENST00000478573 BABAM2Q9NXR7 383 aa2.32□□□□□ -2.04
CDC42BPA-212ENST00000478573 ZMAT5Q9UDW3 170 aaKnown RBP2.32□□□□□ -2.04
CDC42BPA-212ENST00000478573 HSPB11Q9Y547 144 aa2.32□□□□□ -2.04
CDC42BPA-212ENST00000478573 MINOS1-NBL1R4GNA1 71 aa2.32□□□□□ -2.04
CDC42BPA-212ENST00000478573 TRGV10A0A0A0MS01 117 aa2.31□□□□□ -2.04
CDC42BPA-212ENST00000478573 IGKV1-9A0A0C4DH69 117 aa2.31□□□□□ -2.04
CDC42BPA-212ENST00000478573 hADV38S2A0JD32 116 aa2.31□□□□□ -2.04
CDC42BPA-212ENST00000478573 CLPSL1A2RUU4 121 aa2.31□□□□□ -2.04
CDC42BPA-212ENST00000478573 ZNF729A6NN14 1252 aaPredicted RBP2.31□□□□□ -2.04
CDC42BPA-212ENST00000478573 OOSP1A8MZH6 123 aa2.31□□□□□ -2.04
CDC42BPA-212ENST00000478573 NDUFC2-KCTD14E9PQ53 114 aa2.31□□□□□ -2.04
CDC42BPA-212ENST00000478573 LINC01619G3V211 115 aa2.31□□□□□ -2.04
CDC42BPA-212ENST00000478573 J3QLW9 94 aa2.31□□□□□ -2.04
CDC42BPA-212ENST00000478573 AIPO00170 330 aa2.31□□□□□ -2.04
CDC42BPA-212ENST00000478573 IFNA4P05014 189 aa2.31□□□□□ -2.04
CDC42BPA-212ENST00000478573 UCHL1P09936 223 aa2.31□□□□□ -2.04
CDC42BPA-212ENST00000478573 STAG3L2P0CL84 134 aa2.31□□□□□ -2.04
CDC42BPA-212ENST00000478573 ZNF728P0DKX0 622 aa2.31□□□□□ -2.04
CDC42BPA-212ENST00000478573 NFYAP23511 347 aaPredicted RBP2.31□□□□□ -2.04
CDC42BPA-212ENST00000478573 S100A11P31949 105 aa2.31□□□□□ -2.04
CDC42BPA-212ENST00000478573 NUP62P37198 522 aaPredicted RBP2.31□□□□□ -2.04
CDC42BPA-212ENST00000478573 OR12D2P58182 307 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms