RNA–Protein interactions for RNA: ENST00000478451.1

GPNMB-210, Transcript of glycoprotein nmb, humanhuman

TSL 4

Gene GPNMB, Length 862 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-210ENST00000478451 PEX7O00628 323 aa3.4□□□□□ -1.87
GPNMB-210ENST00000478451 FOXH1O75593 365 aa3.4□□□□□ -1.87
GPNMB-210ENST00000478451 OR2J3O76001 311 aa3.4□□□□□ -1.87
GPNMB-210ENST00000478451 CSN3P07498 182 aa3.4□□□□□ -1.87
GPNMB-210ENST00000478451 OR5AL1P0C617 328 aa3.4□□□□□ -1.87
GPNMB-210ENST00000478451 SAA1P0DJI8 122 aaPredicted RBP3.4□□□□□ -1.87
GPNMB-210ENST00000478451 CT45A6P0DMU7 189 aa3.4□□□□□ -1.87
GPNMB-210ENST00000478451 CT45A5P0DMU8 189 aa3.4□□□□□ -1.87
GPNMB-210ENST00000478451 CT45A7P0DMV0 189 aa3.4□□□□□ -1.87
GPNMB-210ENST00000478451 G0S2P27469 103 aa3.4□□□□□ -1.87
GPNMB-210ENST00000478451 LGALS7P47929 136 aa3.4□□□□□ -1.87
GPNMB-210ENST00000478451 GNG10P50151 68 aa3.4□□□□□ -1.87
GPNMB-210ENST00000478451 PRRX1P54821 245 aa3.4□□□□□ -1.87
GPNMB-210ENST00000478451 KLF5Q13887 457 aaPredicted RBP3.4□□□□□ -1.87
GPNMB-210ENST00000478451 SPATA31B1PQ5VZV4 182 aa3.4□□□□□ -1.87
GPNMB-210ENST00000478451 DOLPP1Q86YN1 238 aa3.4□□□□□ -1.87
GPNMB-210ENST00000478451 LINC00311Q8N616 119 aa3.4□□□□□ -1.87
GPNMB-210ENST00000478451 DEFB123Q8N688 67 aa3.4□□□□□ -1.87
GPNMB-210ENST00000478451 THAP8Q8NA92 274 aa3.4□□□□□ -1.87
GPNMB-210ENST00000478451 ST6GALNAC3Q8NDV1 305 aa3.4□□□□□ -1.87
GPNMB-210ENST00000478451 NUP37Q8NFH4 326 aa3.4□□□□□ -1.87
GPNMB-210ENST00000478451 OR2D3Q8NGH3 330 aa3.4□□□□□ -1.87
GPNMB-210ENST00000478451 TSKUQ8WUA8 353 aa3.4□□□□□ -1.87
GPNMB-210ENST00000478451 TNFRSF14Q92956 283 aa3.4□□□□□ -1.87
GPNMB-210ENST00000478451 CHCHD1Q96BP2 118 aaKnown RBP3.4□□□□□ -1.87
GPNMB-210ENST00000478451 WFIKKN1Q96NZ8 548 aa3.4□□□□□ -1.87
GPNMB-210ENST00000478451 GAFA1Q96PS6 74 aa3.4□□□□□ -1.87
GPNMB-210ENST00000478451 FAM103A1Q9BTL3 118 aaKnown RBP3.4□□□□□ -1.87
GPNMB-210ENST00000478451 GFRA4Q9GZZ7 299 aa3.4□□□□□ -1.87
GPNMB-210ENST00000478451 RNASE7Q9H1E1 156 aaKnown RBP3.4□□□□□ -1.87
GPNMB-210ENST00000478451 NDUFA4L2Q9NRX3 87 aa3.4□□□□□ -1.87
GPNMB-210ENST00000478451 ZNF492Q9P255 531 aa3.4□□□□□ -1.87
GPNMB-210ENST00000478451 ZFP30Q9Y2G7 519 aa3.4□□□□□ -1.87
GPNMB-210ENST00000478451 WASHC3Q9Y3C0 194 aa3.4□□□□□ -1.87
GPNMB-210ENST00000478451 MRPS16Q9Y3D3 137 aaKnown RBP3.4□□□□□ -1.87
GPNMB-210ENST00000478451 A0A1B0GW15 77 aa3.39□□□□□ -1.87
GPNMB-210ENST00000478451 A0A1W2PS18 150 aa3.39□□□□□ -1.87
GPNMB-210ENST00000478451 K7EQM0 130 aa3.39□□□□□ -1.87
GPNMB-210ENST00000478451 M0R2Z0 102 aa3.39□□□□□ -1.87
GPNMB-210ENST00000478451 CDX4O14627 284 aaPredicted RBP3.39□□□□□ -1.87
GPNMB-210ENST00000478451 NDUFB3O43676 98 aa3.39□□□□□ -1.87
GPNMB-210ENST00000478451 SCGB2A1O75556 95 aa3.39□□□□□ -1.87
GPNMB-210ENST00000478451 CEACAM4O75871 244 aa3.39□□□□□ -1.87
GPNMB-210ENST00000478451 P01737 135 aa3.39□□□□□ -1.87
GPNMB-210ENST00000478451 IGHV1-46P01743 117 aa3.39□□□□□ -1.87
GPNMB-210ENST00000478451 TFF1P04155 84 aa3.39□□□□□ -1.87
GPNMB-210ENST00000478451 SLC25A5P05141 298 aaKnown RBP3.39□□□□□ -1.87
GPNMB-210ENST00000478451 NTF3P20783 257 aa3.39□□□□□ -1.87
GPNMB-210ENST00000478451 CHRNB4P30926 498 aa3.39□□□□□ -1.87
GPNMB-210ENST00000478451 S100A7P31151 101 aa3.39□□□□□ -1.87
GPNMB-210ENST00000478451 CDKN1AP38936 164 aa3.39□□□□□ -1.87
GPNMB-210ENST00000478451 CTRLP40313 264 aa3.39□□□□□ -1.87
GPNMB-210ENST00000478451 MFAP2P55001 183 aa3.39□□□□□ -1.87
GPNMB-210ENST00000478451 HBBP68871 147 aa3.39□□□□□ -1.87
GPNMB-210ENST00000478451 PAX2Q02962 417 aa3.39□□□□□ -1.87
GPNMB-210ENST00000478451 OR5I1Q13606 314 aa3.39□□□□□ -1.87
GPNMB-210ENST00000478451 FXYD3Q14802 87 aa3.39□□□□□ -1.87
GPNMB-210ENST00000478451 BATFQ16520 125 aa3.39□□□□□ -1.87
GPNMB-210ENST00000478451 PRSS8Q16651 343 aa3.39□□□□□ -1.87
GPNMB-210ENST00000478451 LRRC10Q5BKY1 277 aa3.39□□□□□ -1.87
GPNMB-210ENST00000478451 FAM53AQ6NSI3 398 aaPredicted RBP3.39□□□□□ -1.87
GPNMB-210ENST00000478451 MRPL54Q6P161 138 aaKnown RBP3.39□□□□□ -1.87
GPNMB-210ENST00000478451 Q6ZN92 141 aa3.39□□□□□ -1.87
GPNMB-210ENST00000478451 CIARTQ8N365 385 aaPredicted RBP3.39□□□□□ -1.87
GPNMB-210ENST00000478451 C5orf17Q8NAS9 161 aa3.39□□□□□ -1.87
GPNMB-210ENST00000478451 FDCSPQ8NFU4 85 aa3.39□□□□□ -1.87
GPNMB-210ENST00000478451 ZNF596Q8TC21 504 aa3.39□□□□□ -1.87
GPNMB-210ENST00000478451 C18orf32Q8TCD1 76 aa3.39□□□□□ -1.87
GPNMB-210ENST00000478451 ORAOV1Q8WV07 137 aa3.39□□□□□ -1.87
GPNMB-210ENST00000478451 SGK494Q96LW2 274 aa3.39□□□□□ -1.87
GPNMB-210ENST00000478451 TRGV9Q99603 122 aa3.39□□□□□ -1.87
GPNMB-210ENST00000478451 ATG101Q9BSB4 218 aa3.39□□□□□ -1.87
GPNMB-210ENST00000478451 TMEM208Q9BTX3 173 aa3.39□□□□□ -1.87
GPNMB-210ENST00000478451 SLC25A2Q9BXI2 301 aa3.39□□□□□ -1.87
GPNMB-210ENST00000478451 TMEM191AQ9H0A3 160 aa3.39□□□□□ -1.87
GPNMB-210ENST00000478451 LPAR2Q9HBW0 351 aa3.39□□□□□ -1.87
GPNMB-210ENST00000478451 NGBQ9NPG2 151 aa3.39□□□□□ -1.87
GPNMB-210ENST00000478451 ZNF355PQ9NSJ1 428 aa3.39□□□□□ -1.87
GPNMB-210ENST00000478451 TP53TG3Q9ULZ0 132 aa3.39□□□□□ -1.87
GPNMB-210ENST00000478451 LAMTOR2Q9Y2Q5 125 aa3.39□□□□□ -1.87
GPNMB-210ENST00000478451 FAM186AA6NE01 2351 aa3.38□□□□□ -1.87
GPNMB-210ENST00000478451 PPIAL4EA0A075B759 164 aa3.38□□□□□ -1.87
GPNMB-210ENST00000478451 TRAV9-2A0A087WT02 112 aa3.38□□□□□ -1.87
GPNMB-210ENST00000478451 TRBV6-1A0A0K0K1D8 114 aa3.38□□□□□ -1.87
GPNMB-210ENST00000478451 A0A1B0GUS0 222 aa3.38□□□□□ -1.87
GPNMB-210ENST00000478451 PSMB11A5LHX3 300 aa3.38□□□□□ -1.87
GPNMB-210ENST00000478451 FBLL1A6NHQ2 334 aaKnown RBP3.38□□□□□ -1.87
GPNMB-210ENST00000478451 PPIAL4DF5H284 164 aa3.38□□□□□ -1.87
GPNMB-210ENST00000478451 H0YJW9 148 aa3.38□□□□□ -1.87
GPNMB-210ENST00000478451 CHEK1O14757 476 aa3.38□□□□□ -1.87
GPNMB-210ENST00000478451 NUPR1O60356 82 aa3.38□□□□□ -1.87
GPNMB-210ENST00000478451 SPINK4O60575 86 aa3.38□□□□□ -1.87
GPNMB-210ENST00000478451 HYPMO75409 117 aa3.38□□□□□ -1.87
GPNMB-210ENST00000478451 IGLV2-8P01709 118 aa3.38□□□□□ -1.87
GPNMB-210ENST00000478451 IGHV3-7P01780 117 aa3.38□□□□□ -1.87
GPNMB-210ENST00000478451 C3orf79P0CE67 100 aa3.38□□□□□ -1.87
GPNMB-210ENST00000478451 PPIAL4FP0DN26 164 aa3.38□□□□□ -1.87
GPNMB-210ENST00000478451 IGLC2P0DOY2 106 aa3.38□□□□□ -1.87
GPNMB-210ENST00000478451 IGLC3P0DOY3 106 aa3.38□□□□□ -1.87
GPNMB-210ENST00000478451 REG1BP48304 166 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms