RNA–Protein interactions for RNA: ENST00000478085.5

SGSM3-209, Transcript of small G protein signaling modulator 3, humanhuman

TSL 2

Gene SGSM3, Length 4,218 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGSM3-209ENST00000478085 HIST1H2BLQ99880 126 aa9.51□□□□□ -0.89
SGSM3-209ENST00000478085 SPTBN5Q9NRC6 3674 aaKnown RBP9.51□□□□□ -0.89
SGSM3-209ENST00000478085 GRIFINA4D1Z8 144 aa9.51□□□□□ -0.89
SGSM3-209ENST00000478085 NDUFS6O75380 124 aaKnown RBP9.51□□□□□ -0.89
SGSM3-209ENST00000478085 OR5AL1P0C617 328 aa9.51□□□□□ -0.89
SGSM3-209ENST00000478085 CD33P20138 364 aa9.51□□□□□ -0.89
SGSM3-209ENST00000478085 IGFL4Q6B9Z1 124 aa9.51□□□□□ -0.89
SGSM3-209ENST00000478085 PHLDA3Q9Y5J5 127 aa9.51□□□□□ -0.89
SGSM3-209ENST00000478085 WFDC12Q8WWY7 111 aa9.51□□□□□ -0.89
SGSM3-209ENST00000478085 TRGV9Q99603 122 aa9.51□□□□□ -0.89
SGSM3-209ENST00000478085 MRPL18Q9H0U6 180 aaKnown RBP9.51□□□□□ -0.89
SGSM3-209ENST00000478085 JKAMPQ9P055 326 aa9.51□□□□□ -0.89
SGSM3-209ENST00000478085 ATG2AQ2TAZ0 1938 aa9.51□□□□□ -0.89
SGSM3-209ENST00000478085 NDUFB8O95169 186 aa9.51□□□□□ -0.89
SGSM3-209ENST00000478085 PRSS1P07477 247 aa9.51□□□□□ -0.89
SGSM3-209ENST00000478085 HNRNPA3P51991 378 aaKnown RBP9.51□□□□□ -0.89
SGSM3-209ENST00000478085 FAM120AOSQ5T036 256 aa9.51□□□□□ -0.89
SGSM3-209ENST00000478085 Q6ZPA2 131 aa9.51□□□□□ -0.89
SGSM3-209ENST00000478085 HAPLN4Q86UW8 402 aa9.51□□□□□ -0.89
SGSM3-209ENST00000478085 FCER1GP30273 86 aa9.5□□□□□ -0.89
SGSM3-209ENST00000478085 FOXA3P55318 350 aaPredicted RBP9.5□□□□□ -0.89
SGSM3-209ENST00000478085 ZNF124Q15973 351 aa9.5□□□□□ -0.89
SGSM3-209ENST00000478085 GFI1BQ5VTD9 330 aa9.5□□□□□ -0.89
SGSM3-209ENST00000478085 GOLT1BQ9Y3E0 138 aa9.5□□□□□ -0.89
SGSM3-209ENST00000478085 GATA3P23771 443 aa9.5□□□□□ -0.89
SGSM3-209ENST00000478085 CKS2P33552 79 aa9.5□□□□□ -0.89
SGSM3-209ENST00000478085 C14orf144Q96I85 54 aa9.49□□□□□ -0.89
SGSM3-209ENST00000478085 ATG101Q9BSB4 218 aa9.49□□□□□ -0.89
SGSM3-209ENST00000478085 FN1P02751 2386 aaKnown RBP9.49□□□□□ -0.89
SGSM3-209ENST00000478085 CA1P00915 261 aaPredicted RBP9.49□□□□□ -0.89
SGSM3-209ENST00000478085 CDSNQ15517 529 aa9.49□□□□□ -0.89
SGSM3-209ENST00000478085 UTF1Q5T230 341 aa9.49□□□□□ -0.89
SGSM3-209ENST00000478085 IMMP2LQ96T52 175 aa9.49□□□□□ -0.89
SGSM3-209ENST00000478085 OTORQ9NRC9 128 aa9.49□□□□□ -0.89
SGSM3-209ENST00000478085 SORL1Q92673 2214 aa9.49□□□□□ -0.89
SGSM3-209ENST00000478085 ZFP36P26651 326 aaKnown RBP9.49□□□□□ -0.89
SGSM3-209ENST00000478085 SPSB3Q6PJ21 355 aa9.49□□□□□ -0.89
SGSM3-209ENST00000478085 FAM159AQ6UWV7 190 aa9.49□□□□□ -0.89
SGSM3-209ENST00000478085 PIP4P2Q8N4L2 257 aa9.49□□□□□ -0.89
SGSM3-209ENST00000478085 C9JCJ5 164 aa9.48□□□□□ -0.89
SGSM3-209ENST00000478085 M0R3E3 92 aa9.48□□□□□ -0.89
SGSM3-209ENST00000478085 HLA-DQA1P01909 254 aa9.48□□□□□ -0.89
SGSM3-209ENST00000478085 MT-ND6P03923 174 aa9.48□□□□□ -0.89
SGSM3-209ENST00000478085 SRIP30626 198 aa9.48□□□□□ -0.89
SGSM3-209ENST00000478085 DAZAP2Q15038 168 aaPredicted RBP9.48□□□□□ -0.89
SGSM3-209ENST00000478085 LCNL1Q6ZST4 164 aa9.48□□□□□ -0.89
SGSM3-209ENST00000478085 RITA1Q96K30 269 aa9.48□□□□□ -0.89
SGSM3-209ENST00000478085 BPTFQ12830 3046 aa9.48□□□□□ -0.89
SGSM3-209ENST00000478085 TRAV8-1A0A0A6YYK1 113 aa9.48□□□□□ -0.89
SGSM3-209ENST00000478085 CD99P14209 185 aa9.48□□□□□ -0.89
SGSM3-209ENST00000478085 DTX2Q86UW9 622 aa9.48□□□□□ -0.89
SGSM3-209ENST00000478085 NSUN5P1Q3KNT7 163 aa9.48□□□□□ -0.89
SGSM3-209ENST00000478085 FAM74A4Q5TZK3 123 aa9.48□□□□□ -0.89
SGSM3-209ENST00000478085 DGAT2L7PQ6IED9 249 aa9.48□□□□□ -0.89
SGSM3-209ENST00000478085 TMEM170AQ8WVE7 144 aa9.48□□□□□ -0.89
SGSM3-209ENST00000478085 LINC00479Q96M42 142 aa9.48□□□□□ -0.89
SGSM3-209ENST00000478085 ELOVL1Q9BW60 279 aa9.48□□□□□ -0.89
SGSM3-209ENST00000478085 ARHGAP21Q5T5U3 1957 aa9.48□□□□□ -0.89
SGSM3-209ENST00000478085 M0R381 172 aa9.48□□□□□ -0.89
SGSM3-209ENST00000478085 TEX38Q6PEX7 206 aa9.48□□□□□ -0.89
SGSM3-209ENST00000478085 PSG8Q9UQ74 426 aa9.48□□□□□ -0.89
SGSM3-209ENST00000478085 PAM16Q9Y3D7 125 aa9.48□□□□□ -0.89
SGSM3-209ENST00000478085 COL5A1-AS1Q5SY13 56 aa9.47□□□□□ -0.89
SGSM3-209ENST00000478085 RAX2Q96IS3 184 aa9.47□□□□□ -0.89
SGSM3-209ENST00000478085 NPIPB5A8MRT5 1133 aa9.47□□□□□ -0.89
SGSM3-209ENST00000478085 TCF24Q7RTU0 167 aa9.47□□□□□ -0.89
SGSM3-209ENST00000478085 YTHDF2Q9Y5A9 579 aaKnown RBP9.47□□□□□ -0.89
SGSM3-209ENST00000478085 PPIFP30405 207 aaKnown RBP9.47□□□□□ -0.89
SGSM3-209ENST00000478085 POU2AF1Q16633 256 aa9.47□□□□□ -0.89
SGSM3-209ENST00000478085 C1orf122Q6ZSJ8 110 aa9.47□□□□□ -0.89
SGSM3-209ENST00000478085 VN1R17PQ8TDU5 208 aa9.47□□□□□ -0.89
SGSM3-209ENST00000478085 C2orf88Q9BSF0 95 aa9.47□□□□□ -0.89
SGSM3-209ENST00000478085 IL36BQ9NZH7 164 aa9.47□□□□□ -0.89
SGSM3-209ENST00000478085 OVOL3O00110 214 aa9.46□□□□□ -0.89
SGSM3-209ENST00000478085 AMBPP02760 352 aa9.46□□□□□ -0.89
SGSM3-209ENST00000478085 C5orf30Q96GV9 206 aa9.46□□□□□ -0.89
SGSM3-209ENST00000478085 JMJD8Q96S16 334 aa9.46□□□□□ -0.89
SGSM3-209ENST00000478085 ACANP16112 2415 aa9.46□□□□□ -0.89
SGSM3-209ENST00000478085 HIGD1CA8MV81 97 aa9.46□□□□□ -0.89
SGSM3-209ENST00000478085 PROP1O75360 226 aa9.46□□□□□ -0.89
SGSM3-209ENST00000478085 IGHV4-38-2P0DP08 117 aa9.46□□□□□ -0.89
SGSM3-209ENST00000478085 TSPOP30536 169 aa9.46□□□□□ -0.89
SGSM3-209ENST00000478085 TMEM116Q8NCL8 245 aa9.46□□□□□ -0.89
SGSM3-209ENST00000478085 OR8A1Q8NGG7 326 aa9.46□□□□□ -0.89
SGSM3-209ENST00000478085 FMC1Q96HJ9 113 aa9.46□□□□□ -0.89
SGSM3-209ENST00000478085 REV3LO60673 3130 aa9.46□□□□□ -0.9
SGSM3-209ENST00000478085 COL4A2P08572 1712 aa9.46□□□□□ -0.9
SGSM3-209ENST00000478085 HOXB4P17483 251 aaPredicted RBP9.46□□□□□ -0.9
SGSM3-209ENST00000478085 C21orf62-AS1Q17RA5 79 aa9.46□□□□□ -0.9
SGSM3-209ENST00000478085 C10orf105Q8TEF2 133 aa9.46□□□□□ -0.9
SGSM3-209ENST00000478085 ASCL2Q99929 193 aa9.46□□□□□ -0.9
SGSM3-209ENST00000478085 HSPB9Q9BQS6 159 aa9.46□□□□□ -0.9
SGSM3-209ENST00000478085 FNDC4Q9H6D8 234 aaPredicted RBP9.46□□□□□ -0.9
SGSM3-209ENST00000478085 IGKV2-40A0A087WW87 121 aaPredicted RBP9.45□□□□□ -0.9
SGSM3-209ENST00000478085 IGKV2D-40P01614 121 aaPredicted RBP9.45□□□□□ -0.9
SGSM3-209ENST00000478085 IGLV2-14P01704 120 aa9.45□□□□□ -0.9
SGSM3-209ENST00000478085 TRBV7-1A0A0A6YYK4 115 aa9.45□□□□□ -0.9
SGSM3-209ENST00000478085 ZNF688P0C7X2 276 aa9.45□□□□□ -0.9
SGSM3-209ENST00000478085 RNASE4P34096 147 aaKnown RBP9.45□□□□□ -0.9
SGSM3-209ENST00000478085 LDLRAD2Q5SZI1 272 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 139.4 ms