RNA–Protein interactions for RNA: ENST00000477520.1

PTCD3-212, Transcript of pentatricopeptide repeat domain 3, human

TSL 4

Gene PTCD3, Length 556 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTCD3-212	ENST00000477520	CFAP126	Q5VTH2	177 aa		3.79	□□□□□ -1.8
PTCD3-212	ENST00000477520	MORN3	Q6PF18	240 aa	Predicted RBP	3.79	□□□□□ -1.8
PTCD3-212	ENST00000477520	SLC25A48	Q6ZT89	311 aa	Known RBP	3.79	□□□□□ -1.8
PTCD3-212	ENST00000477520	PPP1R32	Q7Z5V6	425 aa		3.79	□□□□□ -1.8
PTCD3-212	ENST00000477520	SBSPON	Q8IVN8	264 aa		3.79	□□□□□ -1.8
PTCD3-212	ENST00000477520	FADS6	Q8N9I5	356 aa		3.79	□□□□□ -1.8
PTCD3-212	ENST00000477520	PRSS3P2	Q8NHM4	247 aa		3.79	□□□□□ -1.8
PTCD3-212	ENST00000477520	MRAP	Q8TCY5	172 aa		3.79	□□□□□ -1.8
PTCD3-212	ENST00000477520	DDB2	Q92466	427 aa		3.79	□□□□□ -1.8
PTCD3-212	ENST00000477520	RAB37	Q96AX2	223 aa		3.79	□□□□□ -1.8
PTCD3-212	ENST00000477520	URB1-AS1	Q96HZ7	61 aa		3.79	□□□□□ -1.8
PTCD3-212	ENST00000477520	IMUP	Q9GZP8	106 aa		3.79	□□□□□ -1.8
PTCD3-212	ENST00000477520	RNASE7	Q9H1E1	156 aa	Known RBP	3.79	□□□□□ -1.8
PTCD3-212	ENST00000477520	RPP21	Q9H633	154 aa	Known RBP	3.79	□□□□□ -1.8
PTCD3-212	ENST00000477520	RAB9B	Q9NP90	201 aa		3.79	□□□□□ -1.8
PTCD3-212	ENST00000477520	PRO0461	Q9UI25	63 aa		3.79	□□□□□ -1.8
PTCD3-212	ENST00000477520	VPREB3	Q9UKI3	123 aa		3.79	□□□□□ -1.8
PTCD3-212	ENST00000477520	CFAP54	Q96N23	3096 aa		3.79	□□□□□ -1.8
PTCD3-212	ENST00000477520	DMXL1	Q9Y485	3027 aa		3.79	□□□□□ -1.8
PTCD3-212	ENST00000477520	CEP295	Q9C0D2	2601 aa		3.78	□□□□□ -1.8
PTCD3-212	ENST00000477520	PTPRB	P23467	1997 aa		3.78	□□□□□ -1.8
PTCD3-212	ENST00000477520	URB1	O60287	2271 aa	Known RBP	3.78	□□□□□ -1.8
PTCD3-212	ENST00000477520	IGKV1-12	A0A0C4DH73	117 aa		3.78	□□□□□ -1.8
PTCD3-212	ENST00000477520	C5orf49	A4QMS7	147 aa		3.78	□□□□□ -1.8
PTCD3-212	ENST00000477520	GGTLC3	B5MD39	225 aa		3.78	□□□□□ -1.8
PTCD3-212	ENST00000477520	C15orf65	H3BRN8	121 aa		3.78	□□□□□ -1.8
PTCD3-212	ENST00000477520	SPRY1	O43609	319 aa	Predicted RBP	3.78	□□□□□ -1.8
PTCD3-212	ENST00000477520	NXPH3	O95157	252 aa		3.78	□□□□□ -1.8
PTCD3-212	ENST00000477520	MOS	P00540	346 aa		3.78	□□□□□ -1.8
PTCD3-212	ENST00000477520	IGKV1D-12	P01611	117 aa		3.78	□□□□□ -1.8
PTCD3-212	ENST00000477520	SLC25A5	P05141	298 aa	Known RBP	3.78	□□□□□ -1.8
PTCD3-212	ENST00000477520	FAM106CP	P0CH98	169 aa		3.78	□□□□□ -1.8
PTCD3-212	ENST00000477520	PPP1CA	P62136	330 aa		3.78	□□□□□ -1.8
PTCD3-212	ENST00000477520	PMVK	Q15126	192 aa		3.78	□□□□□ -1.8
PTCD3-212	ENST00000477520	C12orf74	Q32Q52	190 aa		3.78	□□□□□ -1.8
PTCD3-212	ENST00000477520	FAM106A	Q4KMX7	169 aa		3.78	□□□□□ -1.8
PTCD3-212	ENST00000477520	LCE1E	Q5T753	118 aa		3.78	□□□□□ -1.8
PTCD3-212	ENST00000477520	TRAT1	Q6PIZ9	186 aa		3.78	□□□□□ -1.8
PTCD3-212	ENST00000477520	ZDHHC23	Q8IYP9	409 aa		3.78	□□□□□ -1.8
PTCD3-212	ENST00000477520	OR1L4	Q8NGR5	311 aa		3.78	□□□□□ -1.8
PTCD3-212	ENST00000477520	IL1F10	Q8WWZ1	152 aa		3.78	□□□□□ -1.8
PTCD3-212	ENST00000477520	TMEM158	Q8WZ71	300 aa		3.78	□□□□□ -1.8
PTCD3-212	ENST00000477520	SNRNP40	Q96DI7	357 aa	Known RBP	3.78	□□□□□ -1.8
PTCD3-212	ENST00000477520	DAZAP1	Q96EP5	407 aa	Known RBP	3.78	□□□□□ -1.8
PTCD3-212	ENST00000477520	ZNF414	Q96IQ9	312 aa		3.78	□□□□□ -1.8
PTCD3-212	ENST00000477520	CYYR1	Q96J86	154 aa		3.78	□□□□□ -1.8
PTCD3-212	ENST00000477520	RITA1	Q96K30	269 aa		3.78	□□□□□ -1.8
PTCD3-212	ENST00000477520	LINC00479	Q96M42	142 aa		3.78	□□□□□ -1.8
PTCD3-212	ENST00000477520	PRELID3A	Q96N28	172 aa		3.78	□□□□□ -1.8
PTCD3-212	ENST00000477520	MGST2	Q99735	147 aa		3.78	□□□□□ -1.8
PTCD3-212	ENST00000477520	C1QTNF5	Q9BXJ0	243 aa		3.78	□□□□□ -1.8
PTCD3-212	ENST00000477520	PRSS22	Q9GZN4	317 aa		3.78	□□□□□ -1.8
PTCD3-212	ENST00000477520	FAM234A	Q9H0X4	552 aa		3.78	□□□□□ -1.8
PTCD3-212	ENST00000477520	OCIAD1	Q9NX40	245 aa		3.78	□□□□□ -1.8
PTCD3-212	ENST00000477520	MDFIC	Q9P1T7	246 aa		3.78	□□□□□ -1.8
PTCD3-212	ENST00000477520	AMMECR1	Q9Y4X0	333 aa	Predicted RBP	3.78	□□□□□ -1.8
PTCD3-212	ENST00000477520	KLF12	Q9Y4X4	402 aa		3.78	□□□□□ -1.8
PTCD3-212	ENST00000477520	INSIG2	Q9Y5U4	225 aa		3.78	□□□□□ -1.8
PTCD3-212	ENST00000477520	APC2	O95996	2303 aa		3.78	□□□□□ -1.8
PTCD3-212	ENST00000477520	CNTRL	Q7Z7A1	2325 aa		3.78	□□□□□ -1.8
PTCD3-212	ENST00000477520	MAP1B	P46821	2468 aa	Known RBP	3.78	□□□□□ -1.8
PTCD3-212	ENST00000477520	CACNA1A	O00555	2505 aa		3.77	□□□□□ -1.81
PTCD3-212	ENST00000477520	NCOR2	Q9Y618	2525 aa		3.77	□□□□□ -1.81
PTCD3-212	ENST00000477520	IGKV1-27	A0A075B6S5	117 aa		3.77	□□□□□ -1.81
PTCD3-212	ENST00000477520	TRAV5	A0A0B4J249	113 aa		3.77	□□□□□ -1.81
PTCD3-212	ENST00000477520	IGKV1-6	A0A0C4DH72	117 aa		3.77	□□□□□ -1.81
PTCD3-212	ENST00000477520		A8MWV9	139 aa		3.77	□□□□□ -1.81
PTCD3-212	ENST00000477520	PRSS46	E5RG02	174 aa		3.77	□□□□□ -1.81
PTCD3-212	ENST00000477520		J3KT08	172 aa		3.77	□□□□□ -1.81
PTCD3-212	ENST00000477520	SYNGR3	O43761	229 aa		3.77	□□□□□ -1.81
PTCD3-212	ENST00000477520	SPINK4	O60575	86 aa		3.77	□□□□□ -1.81
PTCD3-212	ENST00000477520	ZG16	O60844	167 aa		3.77	□□□□□ -1.81
PTCD3-212	ENST00000477520	SCRG1	O75711	98 aa		3.77	□□□□□ -1.81
PTCD3-212	ENST00000477520	BRI3	O95415	125 aa		3.77	□□□□□ -1.81
PTCD3-212	ENST00000477520		P01737	135 aa		3.77	□□□□□ -1.81
PTCD3-212	ENST00000477520	HBD	P02042	147 aa		3.77	□□□□□ -1.81
PTCD3-212	ENST00000477520	MT-ATP8	P03928	68 aa		3.77	□□□□□ -1.81
PTCD3-212	ENST00000477520	IL4	P05112	153 aa		3.77	□□□□□ -1.81
PTCD3-212	ENST00000477520	SCGB1C2	P0DMR2	95 aa		3.77	□□□□□ -1.81
PTCD3-212	ENST00000477520	FOXG1	P55316	489 aa	Predicted RBP	3.77	□□□□□ -1.81
PTCD3-212	ENST00000477520	XG	P55808	180 aa		3.77	□□□□□ -1.81
PTCD3-212	ENST00000477520	ERVK-16	P61578	105 aa		3.77	□□□□□ -1.81
PTCD3-212	ENST00000477520	NNAT	Q16517	81 aa		3.77	□□□□□ -1.81
PTCD3-212	ENST00000477520	TBC1D28	Q2M2D7	210 aa		3.77	□□□□□ -1.81
PTCD3-212	ENST00000477520	DEFB110	Q30KQ9	67 aa		3.77	□□□□□ -1.81
PTCD3-212	ENST00000477520	KLF17	Q5JT82	389 aa	Predicted RBP	3.77	□□□□□ -1.81
PTCD3-212	ENST00000477520	RPS19BP1	Q86WX3	136 aa	Known RBP	3.77	□□□□□ -1.81
PTCD3-212	ENST00000477520	PDPN	Q86YL7	162 aa		3.77	□□□□□ -1.81
PTCD3-212	ENST00000477520	DRAM1	Q8N682	238 aa		3.77	□□□□□ -1.81
PTCD3-212	ENST00000477520	KIR3DL3	Q8N743	410 aa		3.77	□□□□□ -1.81
PTCD3-212	ENST00000477520	ZNF441	Q8N8Z8	693 aa		3.77	□□□□□ -1.81
PTCD3-212	ENST00000477520	TMEM178A	Q8NBL3	297 aa		3.77	□□□□□ -1.81
PTCD3-212	ENST00000477520	NFAM1	Q8NET5	270 aa	Predicted RBP	3.77	□□□□□ -1.81
PTCD3-212	ENST00000477520	OR11H6	Q8NGC7	330 aa		3.77	□□□□□ -1.81
PTCD3-212	ENST00000477520	RNF138	Q8WVD3	245 aa		3.77	□□□□□ -1.81
PTCD3-212	ENST00000477520	ZDHHC19	Q8WVZ1	309 aa	Predicted RBP	3.77	□□□□□ -1.81
PTCD3-212	ENST00000477520	PIGC	Q92535	297 aa		3.77	□□□□□ -1.81
PTCD3-212	ENST00000477520	IFI27L1	Q96BM0	104 aa		3.77	□□□□□ -1.81
PTCD3-212	ENST00000477520	FMC1	Q96HJ9	113 aa		3.77	□□□□□ -1.81
PTCD3-212	ENST00000477520	C20orf78	Q9BR46	151 aa		3.77	□□□□□ -1.81

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