RNA–Protein interactions for RNA: ENST00000476553.1

NUP58-209, Transcript of nucleoporin 58, humanhuman

TSL 4

Gene NUP58, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-209ENST00000476553 TXNL4BQ9NX01 149 aaKnown RBP3.65□□□□□ -1.83
NUP58-209ENST00000476553 MPC1Q9Y5U8 109 aa3.65□□□□□ -1.83
NUP58-209ENST00000476553 HLA-DRB4X5D2U9 266 aa3.65□□□□□ -1.83
NUP58-209ENST00000476553 ATG2AQ2TAZ0 1938 aa3.64□□□□□ -1.83
NUP58-209ENST00000476553 TRPM1Q7Z4N2 1603 aa3.64□□□□□ -1.83
NUP58-209ENST00000476553 A0A0G2JMM0 328 aa3.64□□□□□ -1.83
NUP58-209ENST00000476553 A0A1W2PPB8 328 aa3.64□□□□□ -1.83
NUP58-209ENST00000476553 A0A1W2PQD3 144 aa3.64□□□□□ -1.83
NUP58-209ENST00000476553 KIR3DP1A8MWS1 328 aa3.64□□□□□ -1.83
NUP58-209ENST00000476553 RER1O15258 196 aa3.64□□□□□ -1.83
NUP58-209ENST00000476553 ZNF861PO60384 105 aa3.64□□□□□ -1.83
NUP58-209ENST00000476553 MT-ND6P03923 174 aa3.64□□□□□ -1.83
NUP58-209ENST00000476553 ZNF93P35789 620 aaPredicted RBP3.64□□□□□ -1.83
NUP58-209ENST00000476553 CHCHD2P9Q5T1J5 151 aaPredicted RBP3.64□□□□□ -1.83
NUP58-209ENST00000476553 NCMAPQ5T1S8 102 aa3.64□□□□□ -1.83
NUP58-209ENST00000476553 SOSTDC1Q6X4U4 206 aa3.64□□□□□ -1.83
NUP58-209ENST00000476553 TMEM91Q6ZNR0 172 aa3.64□□□□□ -1.83
NUP58-209ENST00000476553 LINC00311Q8N616 119 aa3.64□□□□□ -1.83
NUP58-209ENST00000476553 LINC00612Q8N6U2 182 aa3.64□□□□□ -1.83
NUP58-209ENST00000476553 OR10P1Q8NGE3 313 aa3.64□□□□□ -1.83
NUP58-209ENST00000476553 DIRC1Q969H9 104 aa3.64□□□□□ -1.83
NUP58-209ENST00000476553 ELSPBP1Q96BH3 223 aa3.64□□□□□ -1.83
NUP58-209ENST00000476553 MRPL57Q9BQC6 102 aaKnown RBP3.64□□□□□ -1.83
NUP58-209ENST00000476553 SNRNP25Q9BV90 132 aaKnown RBP3.64□□□□□ -1.83
NUP58-209ENST00000476553 COMMD3Q9UBI1 195 aa3.64□□□□□ -1.83
NUP58-209ENST00000476553 ABCC10Q5T3U5 1492 aa3.64□□□□□ -1.83
NUP58-209ENST00000476553 NUP98P52948 1817 aa3.63□□□□□ -1.83
NUP58-209ENST00000476553 RIMBP3CA6NJZ7 1639 aa3.63□□□□□ -1.83
NUP58-209ENST00000476553 RIMBP3BA6NNM3 1639 aa3.63□□□□□ -1.83
NUP58-209ENST00000476553 RIMBP3Q9UFD9 1639 aa3.63□□□□□ -1.83
NUP58-209ENST00000476553 MYOM2P54296 1465 aa3.63□□□□□ -1.83
NUP58-209ENST00000476553 CREBL2O60519 120 aaPredicted RBP3.63□□□□□ -1.83
NUP58-209ENST00000476553 HIST1H1DP16402 221 aaKnown RBP3.63□□□□□ -1.83
NUP58-209ENST00000476553 EIF2B2P49770 351 aaKnown RBP3.63□□□□□ -1.83
NUP58-209ENST00000476553 FUT5Q11128 374 aa3.63□□□□□ -1.83
NUP58-209ENST00000476553 FAM229BQ4G0N7 80 aa3.63□□□□□ -1.83
NUP58-209ENST00000476553 PATE2Q6UY27 113 aa3.63□□□□□ -1.83
NUP58-209ENST00000476553 GTF2H5Q6ZYL4 71 aa3.63□□□□□ -1.83
NUP58-209ENST00000476553 DYNAPQ8N1N2 210 aa3.63□□□□□ -1.83
NUP58-209ENST00000476553 OR4B1Q8NGF8 309 aa3.63□□□□□ -1.83
NUP58-209ENST00000476553 SFT2D1Q8WV19 159 aa3.63□□□□□ -1.83
NUP58-209ENST00000476553 IMMP2LQ96T52 175 aa3.63□□□□□ -1.83
NUP58-209ENST00000476553 FAIMQ9NVQ4 179 aa3.63□□□□□ -1.83
NUP58-209ENST00000476553 NCKAP5O14513 1909 aa3.63□□□□□ -1.83
NUP58-209ENST00000476553 ZFYVE16Q7Z3T8 1539 aa3.63□□□□□ -1.83
NUP58-209ENST00000476553 CROCCQ5TZA2 2017 aa3.63□□□□□ -1.83
NUP58-209ENST00000476553 PZPP20742 1482 aa3.62□□□□□ -1.83
NUP58-209ENST00000476553 ARHGEF28Q8N1W1 1705 aaKnown RBP3.62□□□□□ -1.83
NUP58-209ENST00000476553 DLC1Q96QB1 1528 aa3.62□□□□□ -1.83
NUP58-209ENST00000476553 C7orf71A4D174 169 aa3.62□□□□□ -1.83
NUP58-209ENST00000476553 C17orf98A8MV24 154 aa3.62□□□□□ -1.83
NUP58-209ENST00000476553 H3BT86 120 aa3.62□□□□□ -1.83
NUP58-209ENST00000476553 CCDC179H3BU77 68 aa3.62□□□□□ -1.83
NUP58-209ENST00000476553 IGHV3-53P01767 116 aa3.62□□□□□ -1.83
NUP58-209ENST00000476553 HBDP02042 147 aa3.62□□□□□ -1.83
NUP58-209ENST00000476553 TRGC1P0CF51 173 aa3.62□□□□□ -1.83
NUP58-209ENST00000476553 NFYAP23511 347 aaPredicted RBP3.62□□□□□ -1.83
NUP58-209ENST00000476553 RPL28P46779 137 aaKnown RBP3.62□□□□□ -1.83
NUP58-209ENST00000476553 DYNLT1P63172 113 aa3.62□□□□□ -1.83
NUP58-209ENST00000476553 SUPT4H1P63272 117 aaKnown RBP3.62□□□□□ -1.83
NUP58-209ENST00000476553 ZNF816Q0VGE8 651 aaPredicted RBP3.62□□□□□ -1.83
NUP58-209ENST00000476553 KHDC3LQ587J8 217 aa3.62□□□□□ -1.83
NUP58-209ENST00000476553 DPH3Q96FX2 82 aa3.62□□□□□ -1.83
NUP58-209ENST00000476553 CIB3Q96Q77 187 aaPredicted RBP3.62□□□□□ -1.83
NUP58-209ENST00000476553 DUSP21Q9H596 190 aa3.62□□□□□ -1.83
NUP58-209ENST00000476553 ZNF443Q9Y2A4 671 aaPredicted RBP3.62□□□□□ -1.83
NUP58-209ENST00000476553 ZNF646O15015 1829 aaPredicted RBP3.62□□□□□ -1.83
NUP58-209ENST00000476553 RGS12O14924 1447 aa3.61□□□□□ -1.83
NUP58-209ENST00000476553 FNDC10F2Z333 226 aa3.61□□□□□ -1.83
NUP58-209ENST00000476553 PYYP10082 97 aa3.61□□□□□ -1.83
NUP58-209ENST00000476553 TPPP2P59282 170 aa3.61□□□□□ -1.83
NUP58-209ENST00000476553 TMEM258P61165 79 aa3.61□□□□□ -1.83
NUP58-209ENST00000476553 SNRPD3P62318 126 aaKnown RBP3.61□□□□□ -1.83
NUP58-209ENST00000476553 ZNF117Q03924 483 aa3.61□□□□□ -1.83
NUP58-209ENST00000476553 C2orf83Q53S99 150 aa3.61□□□□□ -1.83
NUP58-209ENST00000476553 AAED1Q7RTV5 226 aa3.61□□□□□ -1.83
NUP58-209ENST00000476553 ATOH7Q8N100 152 aa3.61□□□□□ -1.83
NUP58-209ENST00000476553 Q8NDZ9 215 aa3.61□□□□□ -1.83
NUP58-209ENST00000476553 UBALD1Q8TB05 177 aa3.61□□□□□ -1.83
NUP58-209ENST00000476553 SPANXDQ9BXN6 97 aa3.61□□□□□ -1.83
NUP58-209ENST00000476553 IER3IP1Q9Y5U9 82 aa3.61□□□□□ -1.83
NUP58-209ENST00000476553 CUL7Q14999 1698 aa3.61□□□□□ -1.83
NUP58-209ENST00000476553 NUP214P35658 2090 aaPredicted RBP3.61□□□□□ -1.83
NUP58-209ENST00000476553 A2ML1A8K2U0 1454 aa3.6□□□□□ -1.83
NUP58-209ENST00000476553 MEGF6O75095 1541 aa3.6□□□□□ -1.83
NUP58-209ENST00000476553 LTBP4Q8N2S1 1624 aa3.6□□□□□ -1.83
NUP58-209ENST00000476553 IGLV3-9A0A075B6K5 115 aa3.6□□□□□ -1.83
NUP58-209ENST00000476553 A0A0D9SG52 128 aa3.6□□□□□ -1.83
NUP58-209ENST00000476553 K7EM74 188 aa3.6□□□□□ -1.83
NUP58-209ENST00000476553 SDCBPO00560 298 aaPredicted RBP3.6□□□□□ -1.83
NUP58-209ENST00000476553 CISD3P0C7P0 127 aa3.6□□□□□ -1.83
NUP58-209ENST00000476553 GZMBP10144 247 aa3.6□□□□□ -1.83
NUP58-209ENST00000476553 HIST1H1BP16401 226 aaKnown RBP3.6□□□□□ -1.83
NUP58-209ENST00000476553 ZNF19P17023 458 aa3.6□□□□□ -1.83
NUP58-209ENST00000476553 LSM3P62310 102 aaKnown RBP3.6□□□□□ -1.83
NUP58-209ENST00000476553 HSD52Q0P140 79 aa3.6□□□□□ -1.83
NUP58-209ENST00000476553 DPPA3Q6W0C5 159 aa3.6□□□□□ -1.83
NUP58-209ENST00000476553 ST20-AS1Q8NBB2 130 aa3.6□□□□□ -1.83
NUP58-209ENST00000476553 C1orf64Q8NEQ6 169 aa3.6□□□□□ -1.83
NUP58-209ENST00000476553 ASF1BQ9NVP2 202 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms