RNA–Protein interactions for RNA: ENST00000474258.1

SEMA4D-216, Transcript of semaphorin 4D, humanhuman

TSL 4

Gene SEMA4D, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-216ENST00000474258 GBGT1Q8N5D6 347 aa8.15□□□□□ -1.1
SEMA4D-216ENST00000474258 LRRC20Q8TCA0 184 aa8.15□□□□□ -1.1
SEMA4D-216ENST00000474258 TMED6Q8WW62 240 aa8.15□□□□□ -1.1
SEMA4D-216ENST00000474258 PSMG3Q9BT73 122 aaPredicted RBP8.15□□□□□ -1.1
SEMA4D-216ENST00000474258 SLC25A32Q9H2D1 315 aa8.15□□□□□ -1.1
SEMA4D-216ENST00000474258 TIMM9Q9Y5J7 89 aa8.15□□□□□ -1.1
SEMA4D-216ENST00000474258 ALMS1Q8TCU4 4167 aa8.15□□□□□ -1.11
SEMA4D-216ENST00000474258 RPS10-NUDT3A0A1W2PQS6 291 aa8.14□□□□□ -1.11
SEMA4D-216ENST00000474258 DNASE2O00115 360 aaPredicted RBP8.14□□□□□ -1.11
SEMA4D-216ENST00000474258 SULT1A2P50226 295 aa8.14□□□□□ -1.11
SEMA4D-216ENST00000474258 RAB5CP51148 216 aa8.14□□□□□ -1.11
SEMA4D-216ENST00000474258 SERF2P84101 59 aa8.14□□□□□ -1.11
SEMA4D-216ENST00000474258 GAMTQ14353 236 aa8.14□□□□□ -1.11
SEMA4D-216ENST00000474258 CLLU1Q5K131 121 aa8.14□□□□□ -1.11
SEMA4D-216ENST00000474258 ETFRF1Q6IPR1 90 aa8.14□□□□□ -1.11
SEMA4D-216ENST00000474258 ZNF600Q6ZNG1 722 aa8.14□□□□□ -1.11
SEMA4D-216ENST00000474258 HSD17B11Q8NBQ5 300 aa8.14□□□□□ -1.11
SEMA4D-216ENST00000474258 OR2G3Q8NGZ4 309 aa8.14□□□□□ -1.11
SEMA4D-216ENST00000474258 GATAD1Q8WUU5 269 aa8.14□□□□□ -1.11
SEMA4D-216ENST00000474258 RARRES2Q99969 163 aa8.14□□□□□ -1.11
SEMA4D-216ENST00000474258 FNDC4Q9H6D8 234 aaPredicted RBP8.14□□□□□ -1.11
SEMA4D-216ENST00000474258 VSIRQ9H7M9 311 aa8.14□□□□□ -1.11
SEMA4D-216ENST00000474258 PUS1Q9Y606 427 aaKnown RBP eCLIP8.14□□□□□ -1.11
SEMA4D-216ENST00000474258 BIRC6Q9NR09 4857 aa8.13□□□□□ -1.11
SEMA4D-216ENST00000474258 TRAV2A0A0B4J234 112 aa8.13□□□□□ -1.11
SEMA4D-216ENST00000474258 UBE2L5PA0A1B0GUS4 154 aa8.13□□□□□ -1.11
SEMA4D-216ENST00000474258 UMAD1C9J7I0 102 aa8.13□□□□□ -1.11
SEMA4D-216ENST00000474258 RAB14P61106 215 aa8.13□□□□□ -1.11
SEMA4D-216ENST00000474258 RPL11P62913 178 aaKnown RBP8.13□□□□□ -1.11
SEMA4D-216ENST00000474258 RNF141Q8WVD5 230 aa8.13□□□□□ -1.11
SEMA4D-216ENST00000474258 SH3BGRL3Q9H299 93 aa8.13□□□□□ -1.11
SEMA4D-216ENST00000474258 MS4A6AQ9H2W1 248 aa8.13□□□□□ -1.11
SEMA4D-216ENST00000474258 TMEM231Q9H6L2 316 aa8.13□□□□□ -1.11
SEMA4D-216ENST00000474258 ZFAND3Q9H8U3 227 aa8.13□□□□□ -1.11
SEMA4D-216ENST00000474258 A0A1W2PS18 150 aa8.12□□□□□ -1.11
SEMA4D-216ENST00000474258 SCGB2A1O75556 95 aa8.12□□□□□ -1.11
SEMA4D-216ENST00000474258 APOHP02749 345 aaPredicted RBP8.12□□□□□ -1.11
SEMA4D-216ENST00000474258 NMBP08949 121 aa8.12□□□□□ -1.11
SEMA4D-216ENST00000474258 FGF7P21781 194 aa8.12□□□□□ -1.11
SEMA4D-216ENST00000474258 NPPCP23582 126 aa8.12□□□□□ -1.11
SEMA4D-216ENST00000474258 FAM74A1Q5RGS3 127 aa8.12□□□□□ -1.11
SEMA4D-216ENST00000474258 TEPPQ6URK8 271 aa8.12□□□□□ -1.11
SEMA4D-216ENST00000474258 THAP8Q8NA92 274 aa8.12□□□□□ -1.11
SEMA4D-216ENST00000474258 OR11H2Q8NH07 326 aa8.12□□□□□ -1.11
SEMA4D-216ENST00000474258 PHLDA1Q8WV24 401 aaPredicted RBP8.12□□□□□ -1.11
SEMA4D-216ENST00000474258 SAT2Q96F10 170 aaPredicted RBP8.12□□□□□ -1.11
SEMA4D-216ENST00000474258 NPCDR1Q9BY65 106 aa8.12□□□□□ -1.11
SEMA4D-216ENST00000474258 RFNGQ9Y644 331 aa8.12□□□□□ -1.11
SEMA4D-216ENST00000474258 IGKV1OR2-108A0A075B7D4 117 aa8.11□□□□□ -1.11
SEMA4D-216ENST00000474258 IGHV3-66A0A0C4DH42 116 aa8.11□□□□□ -1.11
SEMA4D-216ENST00000474258 C17orf112F2Z3M2 114 aa8.11□□□□□ -1.11
SEMA4D-216ENST00000474258 CLN5O75503 358 aa8.11□□□□□ -1.11
SEMA4D-216ENST00000474258 CA1P00915 261 aaPredicted RBP8.11□□□□□ -1.11
SEMA4D-216ENST00000474258 OPRK1P41145 380 aa8.11□□□□□ -1.11
SEMA4D-216ENST00000474258 RPL29P47914 159 aaKnown RBP8.11□□□□□ -1.11
SEMA4D-216ENST00000474258 DEFB131AP59861 70 aa8.11□□□□□ -1.11
SEMA4D-216ENST00000474258 RAB31Q13636 194 aa8.11□□□□□ -1.11
SEMA4D-216ENST00000474258 NDUFA5Q16718 116 aa8.11□□□□□ -1.11
SEMA4D-216ENST00000474258 DPPA3Q6W0C5 159 aa8.11□□□□□ -1.11
SEMA4D-216ENST00000474258 OR4X1Q8NH49 305 aa8.11□□□□□ -1.11
SEMA4D-216ENST00000474258 NPIPB3Q92617 1050 aa8.11□□□□□ -1.11
SEMA4D-216ENST00000474258 SLC35E1Q96K37 410 aa8.11□□□□□ -1.11
SEMA4D-216ENST00000474258 MGST2Q99735 147 aa8.11□□□□□ -1.11
SEMA4D-216ENST00000474258 RSG1Q9BU20 258 aa8.11□□□□□ -1.11
SEMA4D-216ENST00000474258 MRPL36Q9P0J6 103 aaKnown RBP8.11□□□□□ -1.11
SEMA4D-216ENST00000474258 SLC45A2Q9UMX9 530 aa8.11□□□□□ -1.11
SEMA4D-216ENST00000474258 IGKV1D-37A0A075B6S9 117 aa8.1□□□□□ -1.11
SEMA4D-216ENST00000474258 TRAV30A0A087WSZ9 112 aa8.1□□□□□ -1.11
SEMA4D-216ENST00000474258 SMCO3A2RU48 225 aa8.1□□□□□ -1.11
SEMA4D-216ENST00000474258 LINC00862A6NCI5 91 aa8.1□□□□□ -1.11
SEMA4D-216ENST00000474258 MBP02144 154 aa8.1□□□□□ -1.11
SEMA4D-216ENST00000474258 CRYBB3P26998 211 aa8.1□□□□□ -1.11
SEMA4D-216ENST00000474258 CAMLGP49069 296 aa8.1□□□□□ -1.11
SEMA4D-216ENST00000474258 BLOC1S1P78537 153 aa8.1□□□□□ -1.11
SEMA4D-216ENST00000474258 PRR20EP86478 221 aa8.1□□□□□ -1.11
SEMA4D-216ENST00000474258 PRR20CP86479 221 aa8.1□□□□□ -1.11
SEMA4D-216ENST00000474258 PRR20DP86480 221 aa8.1□□□□□ -1.11
SEMA4D-216ENST00000474258 PRR20BP86481 221 aa8.1□□□□□ -1.11
SEMA4D-216ENST00000474258 PRR20AP86496 221 aa8.1□□□□□ -1.11
SEMA4D-216ENST00000474258 AKR1C1Q04828 323 aa8.1□□□□□ -1.11
SEMA4D-216ENST00000474258 LEMD1Q68G75 181 aa8.1□□□□□ -1.11
SEMA4D-216ENST00000474258 STHQ8IWL8 128 aa8.1□□□□□ -1.11
SEMA4D-216ENST00000474258 ZNF709Q8N972 641 aa8.1□□□□□ -1.11
SEMA4D-216ENST00000474258 C11orf45Q8TAV5 145 aa8.1□□□□□ -1.11
SEMA4D-216ENST00000474258 NARS2Q96I59 477 aaKnown RBP8.1□□□□□ -1.11
SEMA4D-216ENST00000474258 METTL26Q96S19 204 aa8.1□□□□□ -1.11
SEMA4D-216ENST00000474258 C11orf68Q9H3H3 251 aaKnown RBP8.1□□□□□ -1.11
SEMA4D-216ENST00000474258 KCNIP2Q9NS61 270 aa8.1□□□□□ -1.11
SEMA4D-216ENST00000474258 MED9Q9NWA0 146 aa8.1□□□□□ -1.11
SEMA4D-216ENST00000474258 RABAC1Q9UI14 185 aa8.1□□□□□ -1.11
SEMA4D-216ENST00000474258 AGPAT2O15120 278 aa8.09□□□□□ -1.11
SEMA4D-216ENST00000474258 LINC00869P0C866 280 aa8.09□□□□□ -1.11
SEMA4D-216ENST00000474258 RND2P52198 227 aa8.09□□□□□ -1.11
SEMA4D-216ENST00000474258 NANOS2P60321 138 aaKnown RBP8.09□□□□□ -1.11
SEMA4D-216ENST00000474258 AKR1C8PQ5T2L2 129 aa8.09□□□□□ -1.11
SEMA4D-216ENST00000474258 LGALS9CQ6DKI2 356 aa8.09□□□□□ -1.11
SEMA4D-216ENST00000474258 TMEM182Q6ZP80 229 aaPredicted RBP8.09□□□□□ -1.11
SEMA4D-216ENST00000474258 FAM24BQ8N5W8 94 aa8.09□□□□□ -1.11
SEMA4D-216ENST00000474258 LYPD6BQ8NI32 183 aa8.09□□□□□ -1.11
SEMA4D-216ENST00000474258 GRAMD2BQ96HH9 432 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms