RNA–Protein interactions for RNA: ENST00000473214.1

RTF1-203, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene RTF1, Length 475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-203ENST00000473214 MYH9P35579 1960 aaKnown RBP4.35□□□□□ -1.71
RTF1-203ENST00000473214 NBPF19A0A087WUL8 3843 aa4.35□□□□□ -1.71
RTF1-203ENST00000473214 IGKV6-21A0A0C4DH24 114 aa4.35□□□□□ -1.71
RTF1-203ENST00000473214 IGHV3-35A0A0C4DH35 117 aa4.35□□□□□ -1.71
RTF1-203ENST00000473214 IRGMA1A4Y4 181 aa4.35□□□□□ -1.71
RTF1-203ENST00000473214 ODAMA1E959 279 aa4.35□□□□□ -1.71
RTF1-203ENST00000473214 KRTAP16-1A8MUX0 517 aa4.35□□□□□ -1.71
RTF1-203ENST00000473214 UBFD1O14562 309 aaKnown RBP4.35□□□□□ -1.71
RTF1-203ENST00000473214 PLA2G10O15496 165 aa4.35□□□□□ -1.71
RTF1-203ENST00000473214 CST7O76096 145 aa4.35□□□□□ -1.71
RTF1-203ENST00000473214 MPC2O95563 127 aa4.35□□□□□ -1.71
RTF1-203ENST00000473214 NAPSAO96009 420 aa4.35□□□□□ -1.71
RTF1-203ENST00000473214 SRP19P09132 144 aaKnown RBP4.35□□□□□ -1.71
RTF1-203ENST00000473214 LGALS3P17931 250 aaKnown RBP4.35□□□□□ -1.71
RTF1-203ENST00000473214 LINC01547P58512 204 aaPredicted RBP4.35□□□□□ -1.71
RTF1-203ENST00000473214 TPPP2P59282 170 aa4.35□□□□□ -1.71
RTF1-203ENST00000473214 SPANXN3Q5MJ09 141 aa4.35□□□□□ -1.71
RTF1-203ENST00000473214 SSX8Q7RTT4 187 aa4.35□□□□□ -1.71
RTF1-203ENST00000473214 TRAPPC6BQ86SZ2 158 aa4.35□□□□□ -1.71
RTF1-203ENST00000473214 MSRB3Q8IXL7 192 aa4.35□□□□□ -1.71
RTF1-203ENST00000473214 DEFB119Q8N690 84 aa4.35□□□□□ -1.71
RTF1-203ENST00000473214 TEX29Q8N6K0 151 aa4.35□□□□□ -1.71
RTF1-203ENST00000473214 DCANP1Q8TF63 244 aa4.35□□□□□ -1.71
RTF1-203ENST00000473214 H1FXQ92522 213 aaKnown RBP4.35□□□□□ -1.71
RTF1-203ENST00000473214 FAM104AQ969W3 186 aa4.35□□□□□ -1.71
RTF1-203ENST00000473214 ZNF799Q96GE5 643 aa4.35□□□□□ -1.71
RTF1-203ENST00000473214 BANF2Q9H503 90 aa4.35□□□□□ -1.71
RTF1-203ENST00000473214 TUBA4BQ9H853 241 aa4.35□□□□□ -1.71
RTF1-203ENST00000473214 DEC1Q9P2X7 70 aa4.35□□□□□ -1.71
RTF1-203ENST00000473214 TP73-AS1Q9UF72 201 aa4.35□□□□□ -1.71
RTF1-203ENST00000473214 HSPE1-MOB4S4R3N1 261 aa4.35□□□□□ -1.71
RTF1-203ENST00000473214 GON4LQ3T8J9 2241 aa4.34□□□□□ -1.71
RTF1-203ENST00000473214 FAM236AA0A1B0GUQ0 79 aa4.34□□□□□ -1.71
RTF1-203ENST00000473214 FAM236BA0A1B0GV22 79 aa4.34□□□□□ -1.71
RTF1-203ENST00000473214 C7orf71A4D174 169 aa4.34□□□□□ -1.71
RTF1-203ENST00000473214 KRTAP4-16G5E9R7 235 aaPredicted RBP4.34□□□□□ -1.71
RTF1-203ENST00000473214 SOCS2O14508 198 aa4.34□□□□□ -1.71
RTF1-203ENST00000473214 HIST1H1DP16402 221 aaKnown RBP4.34□□□□□ -1.71
RTF1-203ENST00000473214 MYL5Q02045 173 aa4.34□□□□□ -1.71
RTF1-203ENST00000473214 TWIST1Q15672 202 aa4.34□□□□□ -1.71
RTF1-203ENST00000473214 MPV17L2Q567V2 206 aa4.34□□□□□ -1.71
RTF1-203ENST00000473214 C9orf57Q5W0N0 161 aa4.34□□□□□ -1.71
RTF1-203ENST00000473214 LCN15Q6UWW0 184 aa4.34□□□□□ -1.71
RTF1-203ENST00000473214 GPHB5Q86YW7 130 aa4.34□□□□□ -1.71
RTF1-203ENST00000473214 RPP25LQ8N5L8 163 aaKnown RBP4.34□□□□□ -1.71
RTF1-203ENST00000473214 C3orf22Q8N5N4 141 aa4.34□□□□□ -1.71
RTF1-203ENST00000473214 PACRGLQ8N7B6 248 aa4.34□□□□□ -1.71
RTF1-203ENST00000473214 SLC25A29Q8N8R3 303 aa4.34□□□□□ -1.71
RTF1-203ENST00000473214 Q8NBF4 154 aa4.34□□□□□ -1.71
RTF1-203ENST00000473214 GINS4Q9BRT9 223 aa4.34□□□□□ -1.71
RTF1-203ENST00000473214 DERL1Q9BUN8 251 aa4.34□□□□□ -1.71
RTF1-203ENST00000473214 TMEM133Q9H2Q1 129 aa4.34□□□□□ -1.71
RTF1-203ENST00000473214 CCDC167Q9P0B6 97 aa4.34□□□□□ -1.71
RTF1-203ENST00000473214 RNF11Q9Y3C5 154 aa4.34□□□□□ -1.71
RTF1-203ENST00000473214 MRPS16Q9Y3D3 137 aaKnown RBP4.34□□□□□ -1.71
RTF1-203ENST00000473214 PI4KAP42356 2102 aa4.34□□□□□ -1.71
RTF1-203ENST00000473214 COL6A6A6NMZ7 2263 aa4.34□□□□□ -1.72
RTF1-203ENST00000473214 DOPEY1Q5JWR5 2465 aa4.33□□□□□ -1.72
RTF1-203ENST00000473214 IGKV1D-43A0A0B4J1Z2 117 aa4.33□□□□□ -1.72
RTF1-203ENST00000473214 IGHV1-58A0A0C4DH39 117 aa4.33□□□□□ -1.72
RTF1-203ENST00000473214 TRBV7-6A0A0J9YX20 115 aa4.33□□□□□ -1.72
RTF1-203ENST00000473214 SMIM31A0A1B0GVY4 71 aa4.33□□□□□ -1.72
RTF1-203ENST00000473214 PMS2P5A8MQ11 134 aa4.33□□□□□ -1.72
RTF1-203ENST00000473214 CCDC179H3BU77 68 aa4.33□□□□□ -1.72
RTF1-203ENST00000473214 PHOX2AO14813 284 aa4.33□□□□□ -1.72
RTF1-203ENST00000473214 PPP1R3DO95685 299 aa4.33□□□□□ -1.72
RTF1-203ENST00000473214 CD14P08571 375 aa4.33□□□□□ -1.72
RTF1-203ENST00000473214 HIST1H2BOP23527 126 aa4.33□□□□□ -1.72
RTF1-203ENST00000473214 HIST1H2BBP33778 126 aa4.33□□□□□ -1.72
RTF1-203ENST00000473214 RPL22P35268 128 aaKnown RBP4.33□□□□□ -1.72
RTF1-203ENST00000473214 ZNF93P35789 620 aaPredicted RBP4.33□□□□□ -1.72
RTF1-203ENST00000473214 ZNF80P51504 273 aaPredicted RBP4.33□□□□□ -1.72
RTF1-203ENST00000473214 FOXA3P55318 350 aaPredicted RBP4.33□□□□□ -1.72
RTF1-203ENST00000473214 HIST1H2BDP58876 126 aa4.33□□□□□ -1.72
RTF1-203ENST00000473214 HIST1H2BCP62807 126 aa4.33□□□□□ -1.72
RTF1-203ENST00000473214 HIST2H2BEQ16778 126 aa4.33□□□□□ -1.72
RTF1-203ENST00000473214 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.33□□□□□ -1.72
RTF1-203ENST00000473214 GUSBP11Q6P575 273 aa4.33□□□□□ -1.72
RTF1-203ENST00000473214 SCXQ7RTU7 201 aa4.33□□□□□ -1.72
RTF1-203ENST00000473214 FER1L6-AS1Q8NA97 138 aa4.33□□□□□ -1.72
RTF1-203ENST00000473214 C7orf33Q8WU49 177 aa4.33□□□□□ -1.72
RTF1-203ENST00000473214 HIST1H2BHQ93079 126 aa4.33□□□□□ -1.72
RTF1-203ENST00000473214 SDF2Q99470 211 aa4.33□□□□□ -1.72
RTF1-203ENST00000473214 HIST1H2BNQ99877 126 aa4.33□□□□□ -1.72
RTF1-203ENST00000473214 HIST1H2BMQ99879 126 aa4.33□□□□□ -1.72
RTF1-203ENST00000473214 UTP20O75691 2785 aaKnown RBP4.33□□□□□ -1.72
RTF1-203ENST00000473214 ABCA12Q86UK0 2595 aa4.33□□□□□ -1.72
RTF1-203ENST00000473214 NUP210Q8TEM1 1887 aaPredicted RBP4.32□□□□□ -1.72
RTF1-203ENST00000473214 SPTAN1Q13813 2472 aaKnown RBP4.32□□□□□ -1.72
RTF1-203ENST00000473214 A0A087X0T9 212 aa4.32□□□□□ -1.72
RTF1-203ENST00000473214 TRAV13-1A0A0B4J241 112 aa4.32□□□□□ -1.72
RTF1-203ENST00000473214 A0A0G2JMM0 328 aa4.32□□□□□ -1.72
RTF1-203ENST00000473214 A0A1W2PPB8 328 aa4.32□□□□□ -1.72
RTF1-203ENST00000473214 ZNF860A6NHJ4 632 aa4.32□□□□□ -1.72
RTF1-203ENST00000473214 KIR3DP1A8MWS1 328 aa4.32□□□□□ -1.72
RTF1-203ENST00000473214 FNDC10F2Z333 226 aa4.32□□□□□ -1.72
RTF1-203ENST00000473214 H3BMG7 143 aa4.32□□□□□ -1.72
RTF1-203ENST00000473214 M0R378 163 aa4.32□□□□□ -1.72
RTF1-203ENST00000473214 CRYGSP22914 178 aa4.32□□□□□ -1.72
RTF1-203ENST00000473214 CRHBPP24387 322 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms