RNA–Protein interactions for RNA: ENST00000473212.1

COL18A1-207, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 2,515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-207ENST00000473212 ZNF738Q8NE65 137 aa16.79■□□□□ 0.28
COL18A1-207ENST00000473212 MED13LQ71F56 2210 aa16.79■□□□□ 0.28
COL18A1-207ENST00000473212 IGHV1-69-2A0A0G2JMI3 117 aa16.79■□□□□ 0.28
COL18A1-207ENST00000473212 COL8A1P27658 744 aa16.79■□□□□ 0.28
COL18A1-207ENST00000473212 Q86TA4 180 aa16.79■□□□□ 0.28
COL18A1-207ENST00000473212 EXOC3-AS1Q8N2X6 119 aa16.79■□□□□ 0.28
COL18A1-207ENST00000473212 GFRA4Q9GZZ7 299 aa16.79■□□□□ 0.28
COL18A1-207ENST00000473212 HIGD1AQ9Y241 93 aa16.79■□□□□ 0.28
COL18A1-207ENST00000473212 PRNTQ86SH4 94 aa16.78■□□□□ 0.28
COL18A1-207ENST00000473212 TMEM133Q9H2Q1 129 aa16.78■□□□□ 0.28
COL18A1-207ENST00000473212 LOC102724200A0A096LPH7 203 aaPredicted RBP16.78■□□□□ 0.28
COL18A1-207ENST00000473212 PSG1P11464 419 aa16.78■□□□□ 0.28
COL18A1-207ENST00000473212 COX7A1P24310 79 aa16.78■□□□□ 0.28
COL18A1-207ENST00000473212 GFRALQ6UXV0 394 aa16.78■□□□□ 0.28
COL18A1-207ENST00000473212 PLP1P60201 277 aa16.77■□□□□ 0.28
COL18A1-207ENST00000473212 GOLT1AQ6ZVE7 132 aa16.77■□□□□ 0.28
COL18A1-207ENST00000473212 FBXL15Q9H469 300 aa16.77■□□□□ 0.28
COL18A1-207ENST00000473212 SIGLEC9Q9Y336 463 aa16.77■□□□□ 0.28
COL18A1-207ENST00000473212 TCF15Q12870 199 aa16.77■□□□□ 0.28
COL18A1-207ENST00000473212 UBE2V1Q13404 147 aa16.77■□□□□ 0.28
COL18A1-207ENST00000473212 ASCL5Q7RTU5 278 aa16.77■□□□□ 0.28
COL18A1-207ENST00000473212 MCRIP2Q9BUT9 160 aaKnown RBP16.77■□□□□ 0.28
COL18A1-207ENST00000473212 CRYGBP07316 175 aa16.76■□□□□ 0.27
COL18A1-207ENST00000473212 OTORQ9NRC9 128 aa16.76■□□□□ 0.27
COL18A1-207ENST00000473212 ANKHD1Q8IWZ3 2542 aaKnown RBP16.76■□□□□ 0.27
COL18A1-207ENST00000473212 NPIPB6E9PJ23 425 aa16.76■□□□□ 0.27
COL18A1-207ENST00000473212 IGLV2-11P01706 119 aa16.76■□□□□ 0.27
COL18A1-207ENST00000473212 NDFIP1Q9BT67 221 aa16.76■□□□□ 0.27
COL18A1-207ENST00000473212 SLC25A39Q9BZJ4 359 aaPredicted RBP16.76■□□□□ 0.27
COL18A1-207ENST00000473212 ST20Q9HBF5 79 aa16.76■□□□□ 0.27
COL18A1-207ENST00000473212 C1RLQ9NZP8 487 aa16.76■□□□□ 0.27
COL18A1-207ENST00000473212 F11RQ9Y624 299 aaKnown RBP16.76■□□□□ 0.27
COL18A1-207ENST00000473212 C21orf62-AS1Q17RA5 79 aa16.75■□□□□ 0.27
COL18A1-207ENST00000473212 TEX22C9J3V5 150 aa16.75■□□□□ 0.27
COL18A1-207ENST00000473212 H0Y8G0 127 aa16.75■□□□□ 0.27
COL18A1-207ENST00000473212 MPV17L2Q567V2 206 aa16.75■□□□□ 0.27
COL18A1-207ENST00000473212 APOHP02749 345 aaPredicted RBP16.74■□□□□ 0.27
COL18A1-207ENST00000473212 CSN3P07498 182 aa16.74■□□□□ 0.27
COL18A1-207ENST00000473212 IGLC1P0CG04 106 aa16.74■□□□□ 0.27
COL18A1-207ENST00000473212 LDLRAD2Q5SZI1 272 aa16.74■□□□□ 0.27
COL18A1-207ENST00000473212 TIMM8BQ9Y5J9 83 aaPredicted RBP16.74■□□□□ 0.27
COL18A1-207ENST00000473212 S4R3C0 116 aa16.74■□□□□ 0.27
COL18A1-207ENST00000473212 FAM231BA6NCW3 169 aa16.74■□□□□ 0.27
COL18A1-207ENST00000473212 PPP1R27Q86WC6 154 aa16.74■□□□□ 0.27
COL18A1-207ENST00000473212 JKAMPQ9P055 326 aa16.74■□□□□ 0.27
COL18A1-207ENST00000473212 INSIG2Q9Y5U4 225 aa16.74■□□□□ 0.27
COL18A1-207ENST00000473212 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP16.73■□□□□ 0.27
COL18A1-207ENST00000473212 IGHV1-3A0A0C4DH29 117 aa16.73■□□□□ 0.27
COL18A1-207ENST00000473212 HAX1O00165 279 aa16.73■□□□□ 0.27
COL18A1-207ENST00000473212 RBP4P02753 201 aa16.73■□□□□ 0.27
COL18A1-207ENST00000473212 C17orf77Q96MU5 243 aa16.73■□□□□ 0.27
COL18A1-207ENST00000473212 KAAG1Q9UBP8 84 aa16.73■□□□□ 0.27
COL18A1-207ENST00000473212 HRNRQ86YZ3 2850 aaPredicted RBP16.73■□□□□ 0.27
COL18A1-207ENST00000473212 PTPRQQ9UMZ3 2332 aa16.73■□□□□ 0.27
COL18A1-207ENST00000473212 LY6HO94772 140 aa16.73■□□□□ 0.27
COL18A1-207ENST00000473212 IGLV1-47P01700 117 aa16.73■□□□□ 0.27
COL18A1-207ENST00000473212 LIPFP07098 398 aa16.73■□□□□ 0.27
COL18A1-207ENST00000473212 RNASE8Q8TDE3 154 aaKnown RBP16.73■□□□□ 0.27
COL18A1-207ENST00000473212 TMUB1Q9BVT8 246 aa16.73■□□□□ 0.27
COL18A1-207ENST00000473212 TMEM191AQ9H0A3 160 aa16.73■□□□□ 0.27
COL18A1-207ENST00000473212 ERASQ7Z444 233 aa16.72■□□□□ 0.27
COL18A1-207ENST00000473212 ZNF785A8K8V0 405 aa16.72■□□□□ 0.27
COL18A1-207ENST00000473212 HTR1DP28221 377 aa16.72■□□□□ 0.27
COL18A1-207ENST00000473212 RASL11BQ9BPW5 248 aa16.72■□□□□ 0.27
COL18A1-207ENST00000473212 MAP1LC3CQ9BXW4 147 aa16.72■□□□□ 0.27
COL18A1-207ENST00000473212 TMEM14CQ9P0S9 112 aa16.72■□□□□ 0.27
COL18A1-207ENST00000473212 OVOL3O00110 214 aa16.71■□□□□ 0.27
COL18A1-207ENST00000473212 FBLN7Q53RD9 439 aa16.71■□□□□ 0.27
COL18A1-207ENST00000473212 SRSF12Q8WXF0 261 aaKnown RBP16.71■□□□□ 0.27
COL18A1-207ENST00000473212 ZC2HC1AQ96GY0 325 aa16.71■□□□□ 0.27
COL18A1-207ENST00000473212 ATRXP46100 2492 aa16.71■□□□□ 0.27
COL18A1-207ENST00000473212 CACNA1BQ00975 2339 aa16.71■□□□□ 0.27
COL18A1-207ENST00000473212 ARMS2P0C7Q2 107 aa16.71■□□□□ 0.27
COL18A1-207ENST00000473212 PMCHL2Q9BQD1 86 aa16.71■□□□□ 0.27
COL18A1-207ENST00000473212 WNK2Q9Y3S1 2297 aa16.71■□□□□ 0.26
COL18A1-207ENST00000473212 BUB1B-PAK6H3BSN5 160 aa16.7■□□□□ 0.26
COL18A1-207ENST00000473212 NUDT3O95989 172 aa16.7■□□□□ 0.26
COL18A1-207ENST00000473212 OR5AL1P0C617 328 aa16.7■□□□□ 0.26
COL18A1-207ENST00000473212 GRNP28799 593 aaKnown RBP16.7■□□□□ 0.26
COL18A1-207ENST00000473212 SLC25A34Q6PIV7 304 aa16.7■□□□□ 0.26
COL18A1-207ENST00000473212 BCL6BQ8N143 479 aaPredicted RBP16.7■□□□□ 0.26
COL18A1-207ENST00000473212 LINC01560Q8TB33 94 aa16.7■□□□□ 0.26
COL18A1-207ENST00000473212 HSBP1L1C9JCN9 74 aa16.7■□□□□ 0.26
COL18A1-207ENST00000473212 I3L2K1 104 aa16.7■□□□□ 0.26
COL18A1-207ENST00000473212 HOXB4P17483 251 aaPredicted RBP16.7■□□□□ 0.26
COL18A1-207ENST00000473212 PAX2Q02962 417 aa16.7■□□□□ 0.26
COL18A1-207ENST00000473212 C16orf54Q6UWD8 224 aa16.7■□□□□ 0.26
COL18A1-207ENST00000473212 LOC105371242A0A075B767 164 aa16.69■□□□□ 0.26
COL18A1-207ENST00000473212 A0A1B0GUT8 65 aa16.69■□□□□ 0.26
COL18A1-207ENST00000473212 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP16.69■□□□□ 0.26
COL18A1-207ENST00000473212 PCP4P48539 62 aa16.69■□□□□ 0.26
COL18A1-207ENST00000473212 ZFHX3Q15911 3703 aa16.69■□□□□ 0.26
COL18A1-207ENST00000473212 IGKV1-17P01599 117 aa16.69■□□□□ 0.26
COL18A1-207ENST00000473212 KLF17Q5JT82 389 aaPredicted RBP16.69■□□□□ 0.26
COL18A1-207ENST00000473212 PET117Q6UWS5 81 aa16.69■□□□□ 0.26
COL18A1-207ENST00000473212 RALYQ9UKM9 306 aaKnown RBP16.69■□□□□ 0.26
COL18A1-207ENST00000473212 IGHV2-70DA0A0C4DH43 119 aa16.68■□□□□ 0.26
COL18A1-207ENST00000473212 VSTM5A8MXK1 200 aa16.68■□□□□ 0.26
COL18A1-207ENST00000473212 RBPJQ06330 500 aa16.68■□□□□ 0.26
COL18A1-207ENST00000473212 NGBQ9NPG2 151 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms