RNA–Protein interactions for RNA: ENST00000472679.1

CLK1-209, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 461 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-209ENST00000472679 LINC00575Q6W349 94 aa0.44□□□□□ -2.34
CLK1-209ENST00000472679 SMR3AQ99954 134 aa0.44□□□□□ -2.34
CLK1-209ENST00000472679 NMNAT1Q9HAN9 279 aaPredicted RBP0.44□□□□□ -2.34
CLK1-209ENST00000472679 FSIP2Q5CZC0 6907 aa0.44□□□□□ -2.34
CLK1-209ENST00000472679 ERCC6L2Q5T890 1561 aa0.44□□□□□ -2.34
CLK1-209ENST00000472679 RYR1P21817 5038 aa0.43□□□□□ -2.34
CLK1-209ENST00000472679 NCOR1O75376 2440 aa0.43□□□□□ -2.34
CLK1-209ENST00000472679 RYR2Q92736 4967 aa0.43□□□□□ -2.34
CLK1-209ENST00000472679 A0A0D9SG42 100 aa0.43□□□□□ -2.34
CLK1-209ENST00000472679 F8W1H4 67 aa0.43□□□□□ -2.34
CLK1-209ENST00000472679 IGLV3-1P01715 115 aa0.43□□□□□ -2.34
CLK1-209ENST00000472679 CYBAP13498 195 aa0.43□□□□□ -2.34
CLK1-209ENST00000472679 ERVS71-1P61550 626 aa0.43□□□□□ -2.34
CLK1-209ENST00000472679 BCL2L15Q5TBC7 163 aa0.43□□□□□ -2.34
CLK1-209ENST00000472679 C1orf134Q5TEV5 83 aa0.43□□□□□ -2.34
CLK1-209ENST00000472679 BTF3L4Q96K17 158 aa0.43□□□□□ -2.34
CLK1-209ENST00000472679 SIP14410 1827 aa0.43□□□□□ -2.34
CLK1-209ENST00000472679 FLNBO75369 2602 aaKnown RBP0.42□□□□□ -2.34
CLK1-209ENST00000472679 KMT2CQ8NEZ4 4911 aaKnown RBP0.42□□□□□ -2.34
CLK1-209ENST00000472679 SPTBN4Q9H254 2564 aa0.42□□□□□ -2.34
CLK1-209ENST00000472679 H3BRM9 83 aa0.42□□□□□ -2.34
CLK1-209ENST00000472679 TMEM256-PLSCR3K7ERE1 68 aa0.42□□□□□ -2.34
CLK1-209ENST00000472679 CST8O60676 142 aa0.42□□□□□ -2.34
CLK1-209ENST00000472679 UBE2BP63146 152 aa0.42□□□□□ -2.34
CLK1-209ENST00000472679 LIN52Q52LA3 116 aa0.42□□□□□ -2.34
CLK1-209ENST00000472679 PRRT1Q99946 306 aa0.42□□□□□ -2.34
CLK1-209ENST00000472679 GGACTQ9BVM4 153 aa0.42□□□□□ -2.34
CLK1-209ENST00000472679 FAM32AQ9Y421 112 aaKnown RBP0.42□□□□□ -2.34
CLK1-209ENST00000472679 ANKRD11Q6UB99 2663 aaPredicted RBP0.42□□□□□ -2.34
CLK1-209ENST00000472679 ABCA13Q86UQ4 5058 aa0.42□□□□□ -2.34
CLK1-209ENST00000472679 STAB1Q9NY15 2570 aa0.42□□□□□ -2.34
CLK1-209ENST00000472679 ANKHD1Q8IWZ3 2542 aaKnown RBP0.41□□□□□ -2.34
CLK1-209ENST00000472679 PIEZO1Q92508 2521 aa0.41□□□□□ -2.34
CLK1-209ENST00000472679 NAV2Q8IVL1 2488 aa0.41□□□□□ -2.34
CLK1-209ENST00000472679 TNRC18O15417 2968 aaPredicted RBP0.41□□□□□ -2.34
CLK1-209ENST00000472679 MYO18BQ8IUG5 2567 aa0.41□□□□□ -2.34
CLK1-209ENST00000472679 EPG5Q9HCE0 2579 aa0.41□□□□□ -2.34
CLK1-209ENST00000472679 IGLV3-32A0A0A0MS00 114 aa0.41□□□□□ -2.34
CLK1-209ENST00000472679 ERC2-IT1O76042 136 aa0.41□□□□□ -2.34
CLK1-209ENST00000472679 GOLT1AQ6ZVE7 132 aa0.41□□□□□ -2.34
CLK1-209ENST00000472679 TEN1Q86WV5 123 aa0.41□□□□□ -2.34
CLK1-209ENST00000472679 CANT1Q8WVQ1 401 aa0.41□□□□□ -2.34
CLK1-209ENST00000472679 ZC2HC1AQ96GY0 325 aa0.41□□□□□ -2.34
CLK1-209ENST00000472679 IMUPQ9GZP8 106 aa0.41□□□□□ -2.34
CLK1-209ENST00000472679 ENY2Q9NPA8 101 aa0.41□□□□□ -2.34
CLK1-209ENST00000472679 TMEM138Q9NPI0 162 aa0.41□□□□□ -2.34
CLK1-209ENST00000472679 ABCA12Q86UK0 2595 aa0.41□□□□□ -2.34
CLK1-209ENST00000472679 RYR3Q15413 4870 aa0.41□□□□□ -2.34
CLK1-209ENST00000472679 TENM4Q6N022 2769 aa0.4□□□□□ -2.34
CLK1-209ENST00000472679 HECTD1Q9ULT8 2610 aa0.4□□□□□ -2.34
CLK1-209ENST00000472679 HERC1Q15751 4861 aa0.4□□□□□ -2.34
CLK1-209ENST00000472679 ZDBF2Q9HCK1 2354 aa0.4□□□□□ -2.34
CLK1-209ENST00000472679 ZNF292O60281 2723 aa0.4□□□□□ -2.35
CLK1-209ENST00000472679 TTC28Q96AY4 2481 aa0.4□□□□□ -2.35
CLK1-209ENST00000472679 SPA17Q15506 151 aa0.4□□□□□ -2.35
CLK1-209ENST00000472679 PSMF1Q92530 271 aa0.4□□□□□ -2.35
CLK1-209ENST00000472679 NBEAL2Q6ZNJ1 2754 aa0.4□□□□□ -2.35
CLK1-209ENST00000472679 ZFHX4Q86UP3 3567 aa0.4□□□□□ -2.35
CLK1-209ENST00000472679 A0A0C4DFX4 3053 aa0.4□□□□□ -2.35
CLK1-209ENST00000472679 PCF11O94913 1555 aaKnown RBP0.4□□□□□ -2.35
CLK1-209ENST00000472679 HYDINQ4G0P3 5121 aa0.4□□□□□ -2.35
CLK1-209ENST00000472679 BIRC6Q9NR09 4857 aa0.39□□□□□ -2.35
CLK1-209ENST00000472679 LRRK2Q5S007 2527 aa0.39□□□□□ -2.35
CLK1-209ENST00000472679 CEP350Q5VT06 3117 aa0.39□□□□□ -2.35
CLK1-209ENST00000472679 DOPEY1Q5JWR5 2465 aa0.39□□□□□ -2.35
CLK1-209ENST00000472679 ITPR3Q14573 2671 aa0.39□□□□□ -2.35
CLK1-209ENST00000472679 HMGB3O15347 200 aaKnown RBP0.39□□□□□ -2.35
CLK1-209ENST00000472679 IGLV1-51P01701 117 aa0.39□□□□□ -2.35
CLK1-209ENST00000472679 CXCL8P10145 99 aa0.39□□□□□ -2.35
CLK1-209ENST00000472679 OR10X1Q8NGY0 326 aa0.39□□□□□ -2.35
CLK1-209ENST00000472679 RAB37Q96AX2 223 aa0.39□□□□□ -2.35
CLK1-209ENST00000472679 LYSMD1Q96S90 227 aa0.39□□□□□ -2.35
CLK1-209ENST00000472679 NPCDR1Q9BY65 106 aa0.39□□□□□ -2.35
CLK1-209ENST00000472679 ASH1LQ9NR48 2969 aaKnown RBP0.39□□□□□ -2.35
CLK1-209ENST00000472679 EPPK1P58107 5090 aaKnown RBP0.39□□□□□ -2.35
CLK1-209ENST00000472679 SSPOA2VEC9 5147 aa0.39□□□□□ -2.35
CLK1-209ENST00000472679 MUC4Q99102 2169 aa0.39□□□□□ -2.35
CLK1-209ENST00000472679 BDP1A6H8Y1 2624 aa0.38□□□□□ -2.35
CLK1-209ENST00000472679 IGSF10Q6WRI0 2623 aa0.38□□□□□ -2.35
CLK1-209ENST00000472679 CCDC168Q8NDH2 2452 aa0.38□□□□□ -2.35
CLK1-209ENST00000472679 IFNA7P01567 189 aa0.38□□□□□ -2.35
CLK1-209ENST00000472679 CTXN2P0C2S0 81 aa0.38□□□□□ -2.35
CLK1-209ENST00000472679 COX7CP15954 63 aa0.38□□□□□ -2.35
CLK1-209ENST00000472679 DYNLT3P51808 116 aa0.38□□□□□ -2.35
CLK1-209ENST00000472679 CDK6Q00534 326 aa0.38□□□□□ -2.35
CLK1-209ENST00000472679 MYL5Q02045 173 aa0.38□□□□□ -2.35
CLK1-209ENST00000472679 CIRBPQ14011 172 aaKnown RBP0.38□□□□□ -2.35
CLK1-209ENST00000472679 TAF1AQ15573 450 aaPredicted RBP0.38□□□□□ -2.35
CLK1-209ENST00000472679 KRTAP20-1Q3LI63 56 aa0.38□□□□□ -2.35
CLK1-209ENST00000472679 SPINK9Q5DT21 86 aa0.38□□□□□ -2.35
CLK1-209ENST00000472679 POP5Q969H6 163 aaKnown RBP0.38□□□□□ -2.35
CLK1-209ENST00000472679 PBOV1Q9GZY1 135 aa0.38□□□□□ -2.35
CLK1-209ENST00000472679 PDZD2O15018 2839 aa0.38□□□□□ -2.35
CLK1-209ENST00000472679 WDFY4Q6ZS81 3184 aa0.38□□□□□ -2.35
CLK1-209ENST00000472679 FAT4Q6V0I7 4981 aa0.38□□□□□ -2.35
CLK1-209ENST00000472679 DNHD1Q96M86 4753 aa0.37□□□□□ -2.35
CLK1-209ENST00000472679 A0A087WSZ3 146 aa0.37□□□□□ -2.35
CLK1-209ENST00000472679 K7EIL1 84 aa0.37□□□□□ -2.35
CLK1-209ENST00000472679 M0R233 179 aa0.37□□□□□ -2.35
CLK1-209ENST00000472679 CST2P09228 141 aa0.37□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms