RNA–Protein interactions for RNA: ENST00000471322.2

HSPG2-208, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 1,602 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-208ENST00000471322 C12orf54Q6X4T0 127 aa13.57□□□□□ -0.24
HSPG2-208ENST00000471322 MT-ND4LP03901 98 aa13.57□□□□□ -0.24
HSPG2-208ENST00000471322 NBEAP1P0C6P0 100 aa13.57□□□□□ -0.24
HSPG2-208ENST00000471322 RPL23P62829 140 aaKnown RBP13.57□□□□□ -0.24
HSPG2-208ENST00000471322 SUMO1P63165 101 aaKnown RBP13.57□□□□□ -0.24
HSPG2-208ENST00000471322 ADIRFQ15847 76 aa13.57□□□□□ -0.24
HSPG2-208ENST00000471322 Q6ZSV7 163 aa13.57□□□□□ -0.24
HSPG2-208ENST00000471322 H3BRN7 92 aa13.56□□□□□ -0.24
HSPG2-208ENST00000471322 IGHV3-23P01764 117 aa13.56□□□□□ -0.24
HSPG2-208ENST00000471322 GP9P14770 177 aa13.56□□□□□ -0.24
HSPG2-208ENST00000471322 BLCAPP62952 87 aa13.56□□□□□ -0.24
HSPG2-208ENST00000471322 FOXL1Q12952 345 aa13.56□□□□□ -0.24
HSPG2-208ENST00000471322 ZNF343Q6P1L6 599 aa13.56□□□□□ -0.24
HSPG2-208ENST00000471322 ZNF600Q6ZNG1 722 aa13.56□□□□□ -0.24
HSPG2-208ENST00000471322 SPATA3Q8NHX4 192 aa13.56□□□□□ -0.24
HSPG2-208ENST00000471322 USMG5Q96IX5 58 aa13.56□□□□□ -0.24
HSPG2-208ENST00000471322 GGTLC3B5MD39 225 aa13.55□□□□□ -0.24
HSPG2-208ENST00000471322 CLEC3BP05452 202 aa13.55□□□□□ -0.24
HSPG2-208ENST00000471322 HIST1H1EP10412 219 aaKnown RBP13.55□□□□□ -0.24
HSPG2-208ENST00000471322 PPIFP30405 207 aaKnown RBP13.55□□□□□ -0.24
HSPG2-208ENST00000471322 BPIFA4PQ86YQ2 179 aa13.55□□□□□ -0.24
HSPG2-208ENST00000471322 MS4A10Q96PG2 267 aa13.55□□□□□ -0.24
HSPG2-208ENST00000471322 LY96Q9Y6Y9 160 aa13.55□□□□□ -0.24
HSPG2-208ENST00000471322 TRRAPQ9Y4A5 3859 aa13.54□□□□□ -0.24
HSPG2-208ENST00000471322 COLCA2A8K830 154 aa13.54□□□□□ -0.24
HSPG2-208ENST00000471322 C9JCJ5 164 aa13.54□□□□□ -0.24
HSPG2-208ENST00000471322 TRGV3P03979 118 aa13.54□□□□□ -0.24
HSPG2-208ENST00000471322 GPR183P32249 361 aa13.54□□□□□ -0.24
HSPG2-208ENST00000471322 C3orf56Q8N813 242 aa13.54□□□□□ -0.24
HSPG2-208ENST00000471322 HELTA6NFD8 242 aa13.53□□□□□ -0.24
HSPG2-208ENST00000471322 HAX1O00165 279 aa13.53□□□□□ -0.24
HSPG2-208ENST00000471322 BMPR1BO00238 502 aa13.53□□□□□ -0.24
HSPG2-208ENST00000471322 CRYBB3P26998 211 aa13.53□□□□□ -0.24
HSPG2-208ENST00000471322 ADMP35318 185 aa13.53□□□□□ -0.24
HSPG2-208ENST00000471322 RELQ04864 619 aaPredicted RBP13.53□□□□□ -0.24
HSPG2-208ENST00000471322 Q6ZS46 218 aa13.53□□□□□ -0.24
HSPG2-208ENST00000471322 LINC01006Q8NI28 216 aa13.53□□□□□ -0.24
HSPG2-208ENST00000471322 ANAPC16Q96DE5 110 aa13.53□□□□□ -0.24
HSPG2-208ENST00000471322 CHRDL1Q9BU40 450 aa13.53□□□□□ -0.24
HSPG2-208ENST00000471322 ZNF98A6NK75 572 aa13.53□□□□□ -0.24
HSPG2-208ENST00000471322 TGOLN2O43493 480 aa13.53□□□□□ -0.24
HSPG2-208ENST00000471322 RPL35P42766 123 aaKnown RBP13.53□□□□□ -0.24
HSPG2-208ENST00000471322 RPL15P61313 204 aaKnown RBP13.53□□□□□ -0.24
HSPG2-208ENST00000471322 USF2Q15853 346 aaPredicted RBP13.53□□□□□ -0.24
HSPG2-208ENST00000471322 LINC01551Q86U37 167 aa13.53□□□□□ -0.24
HSPG2-208ENST00000471322 ZNF329Q86UD4 541 aa13.53□□□□□ -0.24
HSPG2-208ENST00000471322 OR4F17Q8NGA8 305 aa13.53□□□□□ -0.24
HSPG2-208ENST00000471322 HIST1H2BAQ96A08 127 aa13.53□□□□□ -0.24
HSPG2-208ENST00000471322 DERL1Q9BUN8 251 aa13.53□□□□□ -0.24
HSPG2-208ENST00000471322 ELOVL1Q9BW60 279 aa13.53□□□□□ -0.24
HSPG2-208ENST00000471322 RABAC1Q9UI14 185 aa13.53□□□□□ -0.24
HSPG2-208ENST00000471322 LINC00527Q9UJ94 153 aa13.53□□□□□ -0.24
HSPG2-208ENST00000471322 A0A0G2JLM5 398 aa13.52□□□□□ -0.25
HSPG2-208ENST00000471322 NDUFA7O95182 113 aa13.52□□□□□ -0.25
HSPG2-208ENST00000471322 MYCNOSP40205 109 aa13.52□□□□□ -0.25
HSPG2-208ENST00000471322 RANP62826 216 aaKnown RBP13.52□□□□□ -0.25
HSPG2-208ENST00000471322 RNF212Q495C1 297 aa13.52□□□□□ -0.25
HSPG2-208ENST00000471322 LEMD1Q68G75 181 aa13.52□□□□□ -0.25
HSPG2-208ENST00000471322 CLEC19AQ6UXS0 136 aa13.52□□□□□ -0.25
HSPG2-208ENST00000471322 C2CD4CQ8TF44 421 aa13.52□□□□□ -0.25
HSPG2-208ENST00000471322 BLNKQ8WV28 456 aa13.52□□□□□ -0.25
HSPG2-208ENST00000471322 CCDC140Q96MF4 163 aa13.52□□□□□ -0.25
HSPG2-208ENST00000471322 NPFFR1Q9GZQ6 430 aa13.52□□□□□ -0.25
HSPG2-208ENST00000471322 PPP1R2P9O14990 202 aa13.51□□□□□ -0.25
HSPG2-208ENST00000471322 RAB9AP51151 201 aa13.51□□□□□ -0.25
HSPG2-208ENST00000471322 TPPP2P59282 170 aa13.51□□□□□ -0.25
HSPG2-208ENST00000471322 TAS2R60P59551 318 aa13.51□□□□□ -0.25
HSPG2-208ENST00000471322 NOL4LQ96MY1 436 aaPredicted RBP13.51□□□□□ -0.25
HSPG2-208ENST00000471322 RNF114Q9Y508 228 aa13.51□□□□□ -0.25
HSPG2-208ENST00000471322 IGLV1-40P01703 118 aa13.5□□□□□ -0.25
HSPG2-208ENST00000471322 TOMM20LQ6UXN7 152 aa13.5□□□□□ -0.25
HSPG2-208ENST00000471322 LYPD1Q8N2G4 141 aa13.5□□□□□ -0.25
HSPG2-208ENST00000471322 ISOC2Q96AB3 205 aa13.5□□□□□ -0.25
HSPG2-208ENST00000471322 PRSS22Q9GZN4 317 aa13.5□□□□□ -0.25
HSPG2-208ENST00000471322 GNB4Q9HAV0 340 aa13.5□□□□□ -0.25
HSPG2-208ENST00000471322 CLPSL1A2RUU4 121 aa13.5□□□□□ -0.25
HSPG2-208ENST00000471322 PGPA6NDG6 321 aa13.5□□□□□ -0.25
HSPG2-208ENST00000471322 S100A9P06702 114 aaKnown RBP13.5□□□□□ -0.25
HSPG2-208ENST00000471322 RPL7P18124 248 aaKnown RBP13.5□□□□□ -0.25
HSPG2-208ENST00000471322 GNG4P50150 75 aa13.5□□□□□ -0.25
HSPG2-208ENST00000471322 CNN1P51911 297 aaKnown RBP13.5□□□□□ -0.25
HSPG2-208ENST00000471322 CFHR3Q02985 330 aa13.5□□□□□ -0.25
HSPG2-208ENST00000471322 TMEM95Q3KNT9 176 aa13.5□□□□□ -0.25
HSPG2-208ENST00000471322 FAM209BQ5JX69 171 aa13.5□□□□□ -0.25
HSPG2-208ENST00000471322 HIST2H2BDQ6DRA6 164 aa13.5□□□□□ -0.25
HSPG2-208ENST00000471322 FAM24BQ8N5W8 94 aa13.5□□□□□ -0.25
HSPG2-208ENST00000471322 ZNF702PQ9H963 129 aa13.5□□□□□ -0.25
HSPG2-208ENST00000471322 OTORQ9NRC9 128 aa13.5□□□□□ -0.25
HSPG2-208ENST00000471322 EPDR1Q9UM22 224 aa13.5□□□□□ -0.25
HSPG2-208ENST00000471322 H7BYZ3 331 aa13.49□□□□□ -0.25
HSPG2-208ENST00000471322 PEX7O00628 323 aa13.49□□□□□ -0.25
HSPG2-208ENST00000471322 IGLC2P0DOY2 106 aa13.49□□□□□ -0.25
HSPG2-208ENST00000471322 PF4V1P10720 104 aa13.49□□□□□ -0.25
HSPG2-208ENST00000471322 C5orf17Q8NAS9 161 aa13.49□□□□□ -0.25
HSPG2-208ENST00000471322 OCC1Q8TAD7 63 aa13.49□□□□□ -0.25
HSPG2-208ENST00000471322 YPEL4Q96NS1 127 aa13.49□□□□□ -0.25
HSPG2-208ENST00000471322 ZNF586Q9NXT0 402 aa13.49□□□□□ -0.25
HSPG2-208ENST00000471322 TRBV20OR9-2A0A075B6H5 130 aa13.48□□□□□ -0.25
HSPG2-208ENST00000471322 TRBV19A0A075B6N1 114 aa13.48□□□□□ -0.25
HSPG2-208ENST00000471322 SLC25A5P05141 298 aaKnown RBP13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms