RNA–Protein interactions for RNA: ENST00000471297.1

SMNDC1-204, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 3

Gene SMNDC1, Length 823 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-204ENST00000471297 Q8N2B8 174 aa4.71□□□□□ -1.66
SMNDC1-204ENST00000471297 OR5AU1Q8NGC0 362 aa4.71□□□□□ -1.66
SMNDC1-204ENST00000471297 OR4F5Q8NH21 305 aa4.71□□□□□ -1.66
SMNDC1-204ENST00000471297 RNF125Q96EQ8 232 aa4.71□□□□□ -1.66
SMNDC1-204ENST00000471297 FAM167A-AS1Q96KT0 104 aa4.71□□□□□ -1.66
SMNDC1-204ENST00000471297 NOL4LQ96MY1 436 aaPredicted RBP4.71□□□□□ -1.66
SMNDC1-204ENST00000471297 UHRF2Q96PU4 802 aa4.71□□□□□ -1.66
SMNDC1-204ENST00000471297 OR4F4Q96R69 305 aa4.71□□□□□ -1.66
SMNDC1-204ENST00000471297 SHANK2-AS3Q9BTD1 123 aa4.71□□□□□ -1.66
SMNDC1-204ENST00000471297 SLC25A39Q9BZJ4 359 aaPredicted RBP4.71□□□□□ -1.66
SMNDC1-204ENST00000471297 TMEM14CQ9P0S9 112 aa4.71□□□□□ -1.66
SMNDC1-204ENST00000471297 RABAC1Q9UI14 185 aa4.71□□□□□ -1.66
SMNDC1-204ENST00000471297 LINC00527Q9UJ94 153 aa4.71□□□□□ -1.66
SMNDC1-204ENST00000471297 S4R3C0 116 aa4.71□□□□□ -1.66
SMNDC1-204ENST00000471297 DOPEY2Q9Y3R5 2298 aa4.71□□□□□ -1.66
SMNDC1-204ENST00000471297 WNK2Q9Y3S1 2297 aa4.71□□□□□ -1.66
SMNDC1-204ENST00000471297 SPG11Q96JI7 2443 aa4.71□□□□□ -1.66
SMNDC1-204ENST00000471297 USP9YO00507 2555 aaPredicted RBP4.7□□□□□ -1.66
SMNDC1-204ENST00000471297 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.7□□□□□ -1.66
SMNDC1-204ENST00000471297 FAM74A7A6NL05 159 aa4.7□□□□□ -1.66
SMNDC1-204ENST00000471297 CLDN34H7C241 214 aa4.7□□□□□ -1.66
SMNDC1-204ENST00000471297 TGOLN2O43493 480 aa4.7□□□□□ -1.66
SMNDC1-204ENST00000471297 IGHV3-23P01764 117 aa4.7□□□□□ -1.66
SMNDC1-204ENST00000471297 NBEAP1P0C6P0 100 aa4.7□□□□□ -1.66
SMNDC1-204ENST00000471297 HIST1H1EP10412 219 aaKnown RBP4.7□□□□□ -1.66
SMNDC1-204ENST00000471297 GPR183P32249 361 aa4.7□□□□□ -1.66
SMNDC1-204ENST00000471297 UBE2G2P60604 165 aa4.7□□□□□ -1.66
SMNDC1-204ENST00000471297 RPL15P61313 204 aaKnown RBP4.7□□□□□ -1.66
SMNDC1-204ENST00000471297 PNRC1Q12796 327 aaPredicted RBP4.7□□□□□ -1.66
SMNDC1-204ENST00000471297 MORN5Q5VZ52 161 aa4.7□□□□□ -1.66
SMNDC1-204ENST00000471297 TEX38Q6PEX7 206 aa4.7□□□□□ -1.66
SMNDC1-204ENST00000471297 CLEC19AQ6UXS0 136 aa4.7□□□□□ -1.66
SMNDC1-204ENST00000471297 BPIFA4PQ86YQ2 179 aa4.7□□□□□ -1.66
SMNDC1-204ENST00000471297 CYB561D1Q8N8Q1 229 aa4.7□□□□□ -1.66
SMNDC1-204ENST00000471297 RPUSD4Q96CM3 377 aaKnown RBP4.7□□□□□ -1.66
SMNDC1-204ENST00000471297 TCEAL7Q9BRU2 100 aa4.7□□□□□ -1.66
SMNDC1-204ENST00000471297 NIPSNAP3BQ9BS92 247 aa4.7□□□□□ -1.66
SMNDC1-204ENST00000471297 ZNF702PQ9H963 129 aa4.7□□□□□ -1.66
SMNDC1-204ENST00000471297 PUS1Q9Y606 427 aaKnown RBP eCLIP4.7□□□□□ -1.66
SMNDC1-204ENST00000471297 LRBAP50851 2863 aa4.7□□□□□ -1.66
SMNDC1-204ENST00000471297 LRRK2Q5S007 2527 aa4.69□□□□□ -1.66
SMNDC1-204ENST00000471297 ZNF98A6NK75 572 aa4.69□□□□□ -1.66
SMNDC1-204ENST00000471297 ZNF727A8MUV8 499 aa4.69□□□□□ -1.66
SMNDC1-204ENST00000471297 B4DEV8 164 aa4.69□□□□□ -1.66
SMNDC1-204ENST00000471297 H3BQ15 152 aa4.69□□□□□ -1.66
SMNDC1-204ENST00000471297 CRYBA1P05813 215 aa4.69□□□□□ -1.66
SMNDC1-204ENST00000471297 OR10J4P0C629 311 aa4.69□□□□□ -1.66
SMNDC1-204ENST00000471297 PSMB8P28062 276 aa4.69□□□□□ -1.66
SMNDC1-204ENST00000471297 ARL3P36405 182 aa4.69□□□□□ -1.66
SMNDC1-204ENST00000471297 CEBPGP53567 150 aa4.69□□□□□ -1.66
SMNDC1-204ENST00000471297 UBE2L3P68036 154 aaKnown RBP4.69□□□□□ -1.66
SMNDC1-204ENST00000471297 GUCA2BQ16661 112 aa4.69□□□□□ -1.66
SMNDC1-204ENST00000471297 TMEM241Q24JQ0 296 aa4.69□□□□□ -1.66
SMNDC1-204ENST00000471297 FAM90A2PQ658T7 463 aa4.69□□□□□ -1.66
SMNDC1-204ENST00000471297 ZNF343Q6P1L6 599 aa4.69□□□□□ -1.66
SMNDC1-204ENST00000471297 TOMM20LQ6UXN7 152 aa4.69□□□□□ -1.66
SMNDC1-204ENST00000471297 IL17RELQ6ZVW7 336 aa4.69□□□□□ -1.66
SMNDC1-204ENST00000471297 OR4F17Q8NGA8 305 aa4.69□□□□□ -1.66
SMNDC1-204ENST00000471297 ZNF418Q8TF45 676 aaPredicted RBP4.69□□□□□ -1.66
SMNDC1-204ENST00000471297 C11orf52Q96A22 123 aa4.69□□□□□ -1.66
SMNDC1-204ENST00000471297 FXYD5Q96DB9 178 aa4.69□□□□□ -1.66
SMNDC1-204ENST00000471297 TVP23CQ96ET8 276 aa4.69□□□□□ -1.66
SMNDC1-204ENST00000471297 CHRDL1Q9BU40 450 aa4.69□□□□□ -1.66
SMNDC1-204ENST00000471297 KRTAP4-11Q9BYQ6 195 aa4.69□□□□□ -1.66
SMNDC1-204ENST00000471297 PARLQ9H300 379 aa4.69□□□□□ -1.66
SMNDC1-204ENST00000471297 GNB4Q9HAV0 340 aa4.69□□□□□ -1.66
SMNDC1-204ENST00000471297 YTHDF2Q9Y5A9 579 aaKnown RBP4.69□□□□□ -1.66
SMNDC1-204ENST00000471297 PLXNB1O43157 2135 aa4.69□□□□□ -1.66
SMNDC1-204ENST00000471297 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.68□□□□□ -1.668e-7■■■■□ 23.4
SMNDC1-204ENST00000471297 DNAJC9-AS1A6NH13 148 aa4.68□□□□□ -1.66
SMNDC1-204ENST00000471297 M0R036 132 aa4.68□□□□□ -1.66
SMNDC1-204ENST00000471297 NDUFA4O00483 81 aa4.68□□□□□ -1.66
SMNDC1-204ENST00000471297 GGCTO75223 188 aaKnown RBP4.68□□□□□ -1.66
SMNDC1-204ENST00000471297 LY6G6DO95868 133 aa4.68□□□□□ -1.66
SMNDC1-204ENST00000471297 S100A9P06702 114 aaKnown RBP4.68□□□□□ -1.66
SMNDC1-204ENST00000471297 PYYP10082 97 aa4.68□□□□□ -1.66
SMNDC1-204ENST00000471297 CD99P14209 185 aa4.68□□□□□ -1.66
SMNDC1-204ENST00000471297 GP9P14770 177 aa4.68□□□□□ -1.66
SMNDC1-204ENST00000471297 RPL7P18124 248 aaKnown RBP4.68□□□□□ -1.66
SMNDC1-204ENST00000471297 SRD5A1P18405 259 aa4.68□□□□□ -1.66
SMNDC1-204ENST00000471297 NPPCP23582 126 aa4.68□□□□□ -1.66
SMNDC1-204ENST00000471297 ATP5G3P48201 142 aa4.68□□□□□ -1.66
SMNDC1-204ENST00000471297 RHEBQ15382 184 aa4.68□□□□□ -1.66
SMNDC1-204ENST00000471297 USF2Q15853 346 aaPredicted RBP4.68□□□□□ -1.66
SMNDC1-204ENST00000471297 C1orf194Q5T5A4 169 aa4.68□□□□□ -1.66
SMNDC1-204ENST00000471297 ATRAIDQ6UW56 229 aa4.68□□□□□ -1.66
SMNDC1-204ENST00000471297 LYPD1Q8N2G4 141 aa4.68□□□□□ -1.66
SMNDC1-204ENST00000471297 ARL6IP6Q8N6S5 226 aa4.68□□□□□ -1.66
SMNDC1-204ENST00000471297 RNF152Q8N8N0 203 aa4.68□□□□□ -1.66
SMNDC1-204ENST00000471297 OR4X2Q8NGF9 303 aa4.68□□□□□ -1.66
SMNDC1-204ENST00000471297 HIST1H2BAQ96A08 127 aa4.68□□□□□ -1.66
SMNDC1-204ENST00000471297 GPR82Q96P67 336 aa4.68□□□□□ -1.66
SMNDC1-204ENST00000471297 METTL26Q96S19 204 aa4.68□□□□□ -1.66
SMNDC1-204ENST00000471297 SMIM7Q9BQ49 75 aa4.68□□□□□ -1.66
SMNDC1-204ENST00000471297 KLK15Q9H2R5 256 aa4.68□□□□□ -1.66
SMNDC1-204ENST00000471297 SDF2L1Q9HCN8 221 aa4.68□□□□□ -1.66
SMNDC1-204ENST00000471297 RPS10P5Q9NQ39 176 aa4.68□□□□□ -1.66
SMNDC1-204ENST00000471297 SERTAD4Q9NUC0 356 aa4.68□□□□□ -1.66
SMNDC1-204ENST00000471297 PEF1Q9UBV8 284 aaKnown RBP4.68□□□□□ -1.66
SMNDC1-204ENST00000471297 NAT8Q9UHE5 227 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms