RNA–Protein interactions for RNA: ENST00000470232.1

SYNGAP1-205, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 3

Gene SYNGAP1, Length 394 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-205ENST00000470232 TMEM242Q9NWH2 141 aa6.72□□□□□ -1.33
SYNGAP1-205ENST00000470232 JPT1Q9UK76 154 aa6.72□□□□□ -1.33
SYNGAP1-205ENST00000470232 GAB2Q9UQC2 676 aa6.72□□□□□ -1.33
SYNGAP1-205ENST00000470232 MUC4Q99102 2169 aa6.71□□□□□ -1.33
SYNGAP1-205ENST00000470232 TRBV24-1A0A075B6N3 115 aa6.71□□□□□ -1.34
SYNGAP1-205ENST00000470232 LINC00473A8K010 186 aa6.71□□□□□ -1.34
SYNGAP1-205ENST00000470232 C15orf62A8K5M9 175 aa6.71□□□□□ -1.34
SYNGAP1-205ENST00000470232 H3BUA1 57 aa6.71□□□□□ -1.34
SYNGAP1-205ENST00000470232 SLC31A2O15432 143 aa6.71□□□□□ -1.34
SYNGAP1-205ENST00000470232 HPRT1P00492 218 aa6.71□□□□□ -1.34
SYNGAP1-205ENST00000470232 DUTP33316 252 aaKnown RBP6.71□□□□□ -1.34
SYNGAP1-205ENST00000470232 GALR1P47211 349 aa6.71□□□□□ -1.34
SYNGAP1-205ENST00000470232 ZNF134P52741 427 aa6.71□□□□□ -1.34
SYNGAP1-205ENST00000470232 BRWD1-AS2P59051 145 aa6.71□□□□□ -1.34
SYNGAP1-205ENST00000470232 SPCS3P61009 180 aa6.71□□□□□ -1.34
SYNGAP1-205ENST00000470232 RPL23P62829 140 aaKnown RBP6.71□□□□□ -1.34
SYNGAP1-205ENST00000470232 RPEL1Q2QD12 228 aa6.71□□□□□ -1.34
SYNGAP1-205ENST00000470232 CT45A1Q5HYN5 189 aa6.71□□□□□ -1.34
SYNGAP1-205ENST00000470232 HIST3H2BBQ8N257 126 aa6.71□□□□□ -1.34
SYNGAP1-205ENST00000470232 NECAP1Q8NC96 275 aa6.71□□□□□ -1.34
SYNGAP1-205ENST00000470232 OR10D4PQ8NGN7 298 aa6.71□□□□□ -1.34
SYNGAP1-205ENST00000470232 CT45A3Q8NHU0 189 aa6.71□□□□□ -1.34
SYNGAP1-205ENST00000470232 FRZBQ92765 325 aa6.71□□□□□ -1.34
SYNGAP1-205ENST00000470232 RAB24Q969Q5 203 aa6.71□□□□□ -1.34
SYNGAP1-205ENST00000470232 PFDN5Q99471 154 aa6.71□□□□□ -1.34
SYNGAP1-205ENST00000470232 OVOL2Q9BRP0 275 aa6.71□□□□□ -1.34
SYNGAP1-205ENST00000470232 GGACTQ9BVM4 153 aa6.71□□□□□ -1.34
SYNGAP1-205ENST00000470232 NPCDR1Q9BY65 106 aa6.71□□□□□ -1.34
SYNGAP1-205ENST00000470232 PARLQ9H300 379 aa6.71□□□□□ -1.34
SYNGAP1-205ENST00000470232 A0A0J9YWU9 116 aa6.7□□□□□ -1.34
SYNGAP1-205ENST00000470232 IZUMO1RA6ND01 250 aa6.7□□□□□ -1.34
SYNGAP1-205ENST00000470232 A6NJY4 79 aa6.7□□□□□ -1.34
SYNGAP1-205ENST00000470232 IFITM10A6NMD0 228 aa6.7□□□□□ -1.34
SYNGAP1-205ENST00000470232 MARCH11A6NNE9 402 aa6.7□□□□□ -1.34
SYNGAP1-205ENST00000470232 F6UZH7 168 aa6.7□□□□□ -1.34
SYNGAP1-205ENST00000470232 RRHO14718 337 aa6.7□□□□□ -1.34
SYNGAP1-205ENST00000470232 YPEL1O60688 119 aa6.7□□□□□ -1.34
SYNGAP1-205ENST00000470232 PAGE4O60829 102 aa6.7□□□□□ -1.34
SYNGAP1-205ENST00000470232 IFNA10P01566 189 aa6.7□□□□□ -1.34
SYNGAP1-205ENST00000470232 ZNF562Q6V9R5 426 aa6.7□□□□□ -1.34
SYNGAP1-205ENST00000470232 SSX9Q7RTT3 188 aa6.7□□□□□ -1.34
SYNGAP1-205ENST00000470232 WFDC3Q8IUB2 231 aa6.7□□□□□ -1.34
SYNGAP1-205ENST00000470232 ZNF439Q8NDP4 499 aa6.7□□□□□ -1.34
SYNGAP1-205ENST00000470232 ANAPC16Q96DE5 110 aa6.7□□□□□ -1.34
SYNGAP1-205ENST00000470232 RITA1Q96K30 269 aa6.7□□□□□ -1.34
SYNGAP1-205ENST00000470232 YPEL2Q96QA6 119 aa6.7□□□□□ -1.34
SYNGAP1-205ENST00000470232 FBXL15Q9H469 300 aa6.7□□□□□ -1.34
SYNGAP1-205ENST00000470232 HEYLQ9NQ87 328 aaPredicted RBP6.7□□□□□ -1.34
SYNGAP1-205ENST00000470232 PEF1Q9UBV8 284 aaKnown RBP6.7□□□□□ -1.34
SYNGAP1-205ENST00000470232 WDR83OSQ9Y284 106 aa6.7□□□□□ -1.34
SYNGAP1-205ENST00000470232 DMRT1Q9Y5R6 373 aa6.7□□□□□ -1.34
SYNGAP1-205ENST00000470232 PKHD1P08F94 4074 aa6.7□□□□□ -1.34
SYNGAP1-205ENST00000470232 DYNC1H1Q14204 4646 aaKnown RBP6.69□□□□□ -1.34
SYNGAP1-205ENST00000470232 DNAH17Q9UFH2 4485 aa6.69□□□□□ -1.34
SYNGAP1-205ENST00000470232 LOC102724200A0A096LPH7 203 aaPredicted RBP6.69□□□□□ -1.34
SYNGAP1-205ENST00000470232 C11orf94C9JXX5 98 aa6.69□□□□□ -1.34
SYNGAP1-205ENST00000470232 RBFOX2O43251 390 aaKnown RBP eCLIP6.69□□□□□ -1.34
SYNGAP1-205ENST00000470232 HRASP01112 189 aa6.69□□□□□ -1.34
SYNGAP1-205ENST00000470232 CD7P09564 240 aa6.69□□□□□ -1.34
SYNGAP1-205ENST00000470232 EGR2P11161 476 aaPredicted RBP6.69□□□□□ -1.34
SYNGAP1-205ENST00000470232 BMI1P35226 326 aa6.69□□□□□ -1.34
SYNGAP1-205ENST00000470232 LINC00205P59089 165 aa6.69□□□□□ -1.34
SYNGAP1-205ENST00000470232 NDPQ00604 133 aa6.69□□□□□ -1.34
SYNGAP1-205ENST00000470232 MORN2Q502X0 79 aa6.69□□□□□ -1.34
SYNGAP1-205ENST00000470232 RPL39P5Q59GN2 51 aa6.69□□□□□ -1.34
SYNGAP1-205ENST00000470232 PDZD11Q5EBL8 140 aa6.69□□□□□ -1.34
SYNGAP1-205ENST00000470232 ZNF383Q8NA42 475 aa6.69□□□□□ -1.34
SYNGAP1-205ENST00000470232 OR52E5Q8NH55 327 aa6.69□□□□□ -1.34
SYNGAP1-205ENST00000470232 OR4S2Q8NH73 311 aa6.69□□□□□ -1.34
SYNGAP1-205ENST00000470232 DYNLRB2Q8TF09 96 aa6.69□□□□□ -1.34
SYNGAP1-205ENST00000470232 PHLDA1Q8WV24 401 aaPredicted RBP6.69□□□□□ -1.34
SYNGAP1-205ENST00000470232 RNF5Q99942 180 aa6.69□□□□□ -1.34
SYNGAP1-205ENST00000470232 GGTLC1Q9BX51 225 aa6.69□□□□□ -1.34
SYNGAP1-205ENST00000470232 ENY2Q9NPA8 101 aa6.69□□□□□ -1.34
SYNGAP1-205ENST00000470232 KCNIP2Q9NS61 270 aa6.69□□□□□ -1.34
SYNGAP1-205ENST00000470232 TP53TG1Q9Y2A0 90 aa6.69□□□□□ -1.34
SYNGAP1-205ENST00000470232 A0A1W2PPV4 95 aa6.68□□□□□ -1.34
SYNGAP1-205ENST00000470232 ZNF785A8K8V0 405 aa6.68□□□□□ -1.34
SYNGAP1-205ENST00000470232 ITGB1BP1O14713 200 aa6.68□□□□□ -1.34
SYNGAP1-205ENST00000470232 MPDU1O75352 247 aa6.68□□□□□ -1.34
SYNGAP1-205ENST00000470232 PFN1P07737 140 aaKnown RBP6.68□□□□□ -1.34
SYNGAP1-205ENST00000470232 MC5RP33032 325 aa6.68□□□□□ -1.34
SYNGAP1-205ENST00000470232 OPRK1P41145 380 aa6.68□□□□□ -1.34
SYNGAP1-205ENST00000470232 TCTAP57738 103 aa6.68□□□□□ -1.34
SYNGAP1-205ENST00000470232 UBE2G2P60604 165 aa6.68□□□□□ -1.34
SYNGAP1-205ENST00000470232 CD300EQ496F6 205 aaPredicted RBP6.68□□□□□ -1.34
SYNGAP1-205ENST00000470232 AARDQ4LEZ3 155 aa6.68□□□□□ -1.34
SYNGAP1-205ENST00000470232 PYY3Q5JQD4 70 aa6.68□□□□□ -1.34
SYNGAP1-205ENST00000470232 DNLZQ5SXM8 178 aa6.68□□□□□ -1.34
SYNGAP1-205ENST00000470232 GFI1BQ5VTD9 330 aa6.68□□□□□ -1.34
SYNGAP1-205ENST00000470232 CST9LP1Q5W188 147 aa6.68□□□□□ -1.34
SYNGAP1-205ENST00000470232 KCNIP4Q6PIL6 250 aa6.68□□□□□ -1.34
SYNGAP1-205ENST00000470232 OR5T1Q8NG75 326 aa6.68□□□□□ -1.34
SYNGAP1-205ENST00000470232 OR4X1Q8NH49 305 aa6.68□□□□□ -1.34
SYNGAP1-205ENST00000470232 USMG5Q96IX5 58 aa6.68□□□□□ -1.34
SYNGAP1-205ENST00000470232 TMEM68Q96MH6 324 aa6.68□□□□□ -1.34
SYNGAP1-205ENST00000470232 PYGO2Q9BRQ0 406 aa6.68□□□□□ -1.34
SYNGAP1-205ENST00000470232 FAM103A1Q9BTL3 118 aaKnown RBP6.68□□□□□ -1.34
SYNGAP1-205ENST00000470232 MRPL20Q9BYC9 149 aaKnown RBP6.68□□□□□ -1.34
SYNGAP1-205ENST00000470232 IFI27L2Q9H2X8 130 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms