RNA–Protein interactions for RNA: ENST00000470091.1

LINC00173-201, long intergenic non-protein coding RNA 173, humanhuman

TSL 1 (best) BASIC

Gene LINC00173, Length 435 nt, Biotype lincRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173-201ENST00000470091 DNAJC4Q9NNZ3 241 aa10.37□□□□□ -0.75
LINC00173-201ENST00000470091 IGHV3-35A0A0C4DH35 117 aa10.36□□□□□ -0.75
LINC00173-201ENST00000470091 RAB19A4D1S5 217 aa10.36□□□□□ -0.75
LINC00173-201ENST00000470091 TRBV12-3P01733 135 aa10.36□□□□□ -0.75
LINC00173-201ENST00000470091 IL4P05112 153 aa10.36□□□□□ -0.75
LINC00173-201ENST00000470091 STAG3L2P0CL84 134 aa10.36□□□□□ -0.75
LINC00173-201ENST00000470091 STAG3L3P0CL85 134 aa10.36□□□□□ -0.75
LINC00173-201ENST00000470091 ARL14EPLP0DKL9 152 aa10.36□□□□□ -0.75
LINC00173-201ENST00000470091 INSL3P51460 131 aa10.36□□□□□ -0.75
LINC00173-201ENST00000470091 SRSF3P84103 164 aaKnown RBP10.36□□□□□ -0.75
LINC00173-201ENST00000470091 SBSPONQ8IVN8 264 aa10.36□□□□□ -0.75
LINC00173-201ENST00000470091 RNF125Q96EQ8 232 aa10.36□□□□□ -0.75
LINC00173-201ENST00000470091 FAM210AQ96ND0 272 aa10.36□□□□□ -0.75
LINC00173-201ENST00000470091 RNF2Q99496 336 aa10.36□□□□□ -0.75
LINC00173-201ENST00000470091 GAR1Q9NY12 217 aaKnown RBP10.36□□□□□ -0.75
LINC00173-201ENST00000470091 GNG13Q9P2W3 67 aa10.36□□□□□ -0.75
LINC00173-201ENST00000470091 HIGD1AQ9Y241 93 aa10.36□□□□□ -0.75
LINC00173-201ENST00000470091 ELOA3CA0A087WX78 387 aaPredicted RBP10.35□□□□□ -0.75
LINC00173-201ENST00000470091 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.35□□□□□ -0.75
LINC00173-201ENST00000470091 TRAV5A0A0B4J249 113 aa10.35□□□□□ -0.75
LINC00173-201ENST00000470091 A0A0G2JLM5 398 aa10.35□□□□□ -0.75
LINC00173-201ENST00000470091 ANKRD34BA5PLL1 514 aa10.35□□□□□ -0.75
LINC00173-201ENST00000470091 C3orf84H3BNL1 204 aa10.35□□□□□ -0.75
LINC00173-201ENST00000470091 OR2C1O95371 312 aa10.35□□□□□ -0.75
LINC00173-201ENST00000470091 ARL3P36405 182 aa10.35□□□□□ -0.75
LINC00173-201ENST00000470091 GUK1Q16774 197 aa10.35□□□□□ -0.75
LINC00173-201ENST00000470091 HAGHQ16775 308 aa10.35□□□□□ -0.75
LINC00173-201ENST00000470091 ZNF600Q6ZNG1 722 aa10.35□□□□□ -0.75
LINC00173-201ENST00000470091 LINC00305Q7Z4B0 112 aa10.35□□□□□ -0.75
LINC00173-201ENST00000470091 Q8WTZ3 238 aa10.35□□□□□ -0.75
LINC00173-201ENST00000470091 ATP6V0BQ99437 205 aa10.35□□□□□ -0.75
LINC00173-201ENST00000470091 SLC25A2Q9BXI2 301 aa10.35□□□□□ -0.75
LINC00173-201ENST00000470091 TECRQ9NZ01 308 aaKnown RBP10.35□□□□□ -0.75
LINC00173-201ENST00000470091 PUS1Q9Y606 427 aaKnown RBP eCLIP10.35□□□□□ -0.75
LINC00173-201ENST00000470091 IGHV4OR15-8A0A075B7B6 117 aa10.34□□□□□ -0.75
LINC00173-201ENST00000470091 A0A087WW49 117 aa10.34□□□□□ -0.75
LINC00173-201ENST00000470091 LINC01619G3V211 115 aa10.34□□□□□ -0.75
LINC00173-201ENST00000470091 CXorf1O96002 111 aa10.34□□□□□ -0.75
LINC00173-201ENST00000470091 C8orf88P0DMB2 117 aa10.34□□□□□ -0.75
LINC00173-201ENST00000470091 GCHFRP30047 84 aa10.34□□□□□ -0.75
LINC00173-201ENST00000470091 USF2Q15853 346 aaPredicted RBP10.34□□□□□ -0.75
LINC00173-201ENST00000470091 KHDC3LQ587J8 217 aa10.34□□□□□ -0.75
LINC00173-201ENST00000470091 ZNF343Q6P1L6 599 aa10.34□□□□□ -0.75
LINC00173-201ENST00000470091 EIF4E3Q8N5X7 224 aaKnown RBP10.34□□□□□ -0.75
LINC00173-201ENST00000470091 FAM167A-AS1Q96KT0 104 aa10.34□□□□□ -0.75
LINC00173-201ENST00000470091 RCHY1Q96PM5 261 aa10.34□□□□□ -0.75
LINC00173-201ENST00000470091 RARRES2Q99969 163 aa10.34□□□□□ -0.75
LINC00173-201ENST00000470091 SCRT1Q9BWW7 348 aa10.34□□□□□ -0.75
LINC00173-201ENST00000470091 TREM1Q9NP99 234 aa10.34□□□□□ -0.75
LINC00173-201ENST00000470091 DYNC2H1Q8NCM8 4307 aaKnown RBP10.33□□□□□ -0.76
LINC00173-201ENST00000470091 IGHV3OR16-8A0A075B7F1 116 aa10.33□□□□□ -0.76
LINC00173-201ENST00000470091 LOC102723971A0A1B0GUV8 181 aa10.33□□□□□ -0.76
LINC00173-201ENST00000470091 RBFOX3A6NFN3 312 aa10.33□□□□□ -0.76
LINC00173-201ENST00000470091 OR7C2O60412 319 aa10.33□□□□□ -0.76
LINC00173-201ENST00000470091 FRMD6-AS1P0C7T7 363 aa10.33□□□□□ -0.76
LINC00173-201ENST00000470091 BCL2P10415 239 aa10.33□□□□□ -0.76
LINC00173-201ENST00000470091 TAS2R45P59539 299 aa10.33□□□□□ -0.76
LINC00173-201ENST00000470091 LEMD1Q68G75 181 aa10.33□□□□□ -0.76
LINC00173-201ENST00000470091 UQCC3Q6UW78 93 aa10.33□□□□□ -0.76
LINC00173-201ENST00000470091 TOMM20LQ6UXN7 152 aa10.33□□□□□ -0.76
LINC00173-201ENST00000470091 MUC7Q8TAX7 377 aa10.33□□□□□ -0.76
LINC00173-201ENST00000470091 ZNF503Q96F45 646 aa10.33□□□□□ -0.76
LINC00173-201ENST00000470091 SLC25A39Q9BZJ4 359 aaPredicted RBP10.33□□□□□ -0.76
LINC00173-201ENST00000470091 EIF5A2Q9GZV4 153 aaKnown RBP10.33□□□□□ -0.76
LINC00173-201ENST00000470091 ZFAND3Q9H8U3 227 aa10.33□□□□□ -0.76
LINC00173-201ENST00000470091 MRPL27Q9P0M9 148 aaKnown RBP10.33□□□□□ -0.76
LINC00173-201ENST00000470091 C9JQL5 133 aa10.32□□□□□ -0.76
LINC00173-201ENST00000470091 H3BRN7 92 aa10.32□□□□□ -0.76
LINC00173-201ENST00000470091 BMPR1BO00238 502 aa10.32□□□□□ -0.76
LINC00173-201ENST00000470091 IFNA1P01562 189 aa10.32□□□□□ -0.76
LINC00173-201ENST00000470091 LGALS1P09382 135 aaKnown RBP10.32□□□□□ -0.76
LINC00173-201ENST00000470091 GP9P14770 177 aa10.32□□□□□ -0.76
LINC00173-201ENST00000470091 RELQ04864 619 aaPredicted RBP10.32□□□□□ -0.76
LINC00173-201ENST00000470091 ICAM4Q14773 271 aa10.32□□□□□ -0.76
LINC00173-201ENST00000470091 ZNF506Q5JVG8 444 aa10.32□□□□□ -0.76
LINC00173-201ENST00000470091 RXFP4Q8TDU9 374 aa10.32□□□□□ -0.76
LINC00173-201ENST00000470091 NARS2Q96I59 477 aaKnown RBP10.32□□□□□ -0.76
LINC00173-201ENST00000470091 SHANK2-AS3Q9BTD1 123 aa10.32□□□□□ -0.76
LINC00173-201ENST00000470091 HSPB1P04792 205 aaKnown RBP10.31□□□□□ -0.76
LINC00173-201ENST00000470091 CD5P06127 495 aa10.31□□□□□ -0.76
LINC00173-201ENST00000470091 OR10J4P0C629 311 aa10.31□□□□□ -0.76
LINC00173-201ENST00000470091 PYYP10082 97 aa10.31□□□□□ -0.76
LINC00173-201ENST00000470091 PSMB3P49720 205 aa10.31□□□□□ -0.76
LINC00173-201ENST00000470091 UBE2G2P60604 165 aa10.31□□□□□ -0.76
LINC00173-201ENST00000470091 UBE2L3P68036 154 aaKnown RBP10.31□□□□□ -0.76
LINC00173-201ENST00000470091 CASC10Q5T4H9 136 aa10.31□□□□□ -0.76
LINC00173-201ENST00000470091 PQLC2Q6ZP29 291 aa10.31□□□□□ -0.76
LINC00173-201ENST00000470091 PAXXQ9BUH6 204 aa10.31□□□□□ -0.76
LINC00173-201ENST00000470091 MANBALQ9NQG1 85 aa10.31□□□□□ -0.76
LINC00173-201ENST00000470091 SACSQ9NZJ4 4579 aa10.31□□□□□ -0.76
LINC00173-201ENST00000470091 RYR2Q92736 4967 aa10.31□□□□□ -0.76
LINC00173-201ENST00000470091 PAGE4O60829 102 aa10.3□□□□□ -0.76
LINC00173-201ENST00000470091 PEA15Q15121 130 aa10.3□□□□□ -0.76
LINC00173-201ENST00000470091 LINC00052Q96N35 136 aa10.3□□□□□ -0.76
LINC00173-201ENST00000470091 ZMAT4Q9H898 229 aa10.3□□□□□ -0.76
LINC00173-201ENST00000470091 PEF1Q9UBV8 284 aaKnown RBP10.3□□□□□ -0.76
LINC00173-201ENST00000470091 RABAC1Q9UI14 185 aa10.3□□□□□ -0.76
LINC00173-201ENST00000470091 ZNF207O43670 478 aaKnown RBP10.29□□□□□ -0.76
LINC00173-201ENST00000470091 GGCTO75223 188 aaKnown RBP10.29□□□□□ -0.76
LINC00173-201ENST00000470091 PPT1P50897 306 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms